Instructor:
John Galeotti
(galeotti+miia ATcs.cmu.edu)
Teaching Assistant: Doug Nelson
(dan13+miia ATpitt.edu)
We comply with both the U. Pitt. and CMU calendars. Lectures are Tuesday and Thursday from 10:30-11:45 AM, in CFA 213, Carnegie Mellon University.
Shadow Program - 5 sessions 8:30-9:30 AM, weekday mornings, see online schedule (same password) and directions.
Last Year's Website has been archived.
myITKgui - Warning: Does not work on Mac (specifically on my intel Mac with VTK5.x)
Week 1 |
Tu 1/13 |
Lecture 1: Introductions, purpose, Syllabus, & imaging modalities Assignment #1 given. |
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Th 1/15 |
Lecture 2: Programming background | ||
Week 2 |
Tu 1/20 |
Lecture 3: ITK background & basic usage |
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Th 1/22 |
Lecture 4: Math & probability background Begin class with a short QUIZ on Snyder ch. 1-2 Recommend also looking at 16-720's Math Tutorial |
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Week 3 |
Tu 1/27 |
Lecture 5: ITK images & iterators |
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Th 1/29 |
Lecture 6: Image characterization Quiz on Snyder ch. 4-5.3 (skip hexagonal coordinates on pp 57-59 & 71-73) |
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Week 4 |
Tu 2/3 |
No Lecture: I have a new baby boy! |
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Th 2/5 |
Lecture 7: Linear processing 1 & ITK pipeline Be sure to sign up for the Shadow Program THIS WEEK. Assignment #3 given (do not attempt Part 3 until after Lecture 9). |
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Week 5 |
Tu 2/10 |
Lecture 8: Linear processing 2 Quiz on Snyder 5.4-5.6,5.8-5A (through page 101, but skip 5.7) |
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Th 2/12 |
Lecture 9: ITK filters: how to write them (neighborhoods & numeric traits) |
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Week 6 |
Tu 2/17 |
Lecture 10: Image relaxation: restoration & feature extraction Quiz on Snyder ch. 6 |
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Th 2/19 |
Lecture 11: ITK filters (advanced filter creation & misc. tools) | ||
Week 7 |
Tu 2/24 |
Lecture 12: Segmentation, part 1 |
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Th 2/26 |
Lecture 13: Segmentation, part 2 (continues using lecture 12 notes) |
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Week 8 |
Tu 3/3 |
Lecture 14: Segmentation, part 3 (active contours) |
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Th 3/5 |
Lecture 15: ITK registration | ||
Spring Break |
3/10 - 3/12 |
No Lectures But get started on your projects |
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Week 9 |
Tu 3/17 |
Lecture 16: Mathematical morphology & image matching Quiz on Snyder 7.1-7.5 & 13.1-13.5 |
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Th 3/19 |
Lecture 17: Level set segmentations & parametric transforms (Snyder 8.5.2 + Insight into Images ch 8 & Snyder 11.1-11.6) Quiz on Snyder 11.1-11.6 |
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Week 10 |
Tu 3/24 |
Lecture 18: Cootes and Taylor ASM (Cootes CVIU 1995) (based on 2008 guest lecture by Ken Urish) |
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Th 3/26 |
Lecture 19: Shape, then finish ASM. |
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Week 11 |
Tu 3/31 |
Lecture 20: Registration in depth (Jen Mercer's slides: Insight into Images ch 10 + Viola & Wells) | |
Th 4/2 |
Lecture 21: Deformable registration Assignment #4 given. |
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Week 12 |
Tu 4/7 |
Lecture 22: Scientfic paper review: ITK Paths | |
Th 4/9 |
Lecture 23: Guest lecture on DTI (see also brain anatomy and the fiber track image gallery) | ||
Week 13 |
Tu 4/14 |
Lecture 24: ITK and open source software development philosophy, and Visualization | |
Th 4/16 |
No Lecture - CMU Spring Carnival | ||
Week 14 |
Tu 4/21 |
Student project presentations | |
Th 4/23 |
Student project presentations & Projects Due |