BLOSUM 80

BLOSUM 80

Biochemical properties of the amino acids
C	sulfhydryl
S, T, P, A ,G	small, hydrophyllic
N, D, E, Q	large, acidic and hydrophyllic
H, K, R	basic
M, I, L, V	small, hydrophobic
F, Y, W	aromatic

	C	S	T	P	A	G	N	D	E	Q	H	R	K	M	I	L	V	F	W	Y
C	9
S	-2	5
T	-1	1	5
P	-4	-1	-2	8
A	-1	1	0	-1	5
G	-4	-1	-2	-3	0	6
N	-3	0	0	-3	-2	-1	6
D	-4	-1	-1	-2	-2	-2	1	6
E	-5	0	-1	-2	-1	-3	-1	1	6
Q	-4	0	-1	-2	-1	-2	0	-1	2	6
H	-4	-1	-2	-3	-2	-3	0	-2	0	1	8
R	-4	-1	-1	-2	-2	-3	-1	-2	-1	1	0	6
K	-4	-1	-1	-1	-1	-2	0	-1	1	1	-1	2	5
M	-2	-2	-1	-3	-1	-4	-3	-4	-2	0	-2	-2	-2	6
I	-2	-3	-1	-4	-2	-5	-4	-4	-4	-3	-4	-3	-3	1	5
L	-2	-3	-2	-3	-2	-4	-4	-5	-4	-3	-3	-3	-3	2	1	4
V	-1	-2	0	-3	0	-4	-4	-4	-3	-3	-4	-3	-3	1	3	1	4
F	-3	-3	-2	-4	-3	-4	-4	-4	-4	-4	-2	-4	-4	0	-1	0	-1	6
Y	-3	-2	-2	-4	-2	-4	-3	-4	-3	-2	2	-3	-3	-2	-2	-2	-2	3	7
W	-3	-4	-4	-5	-3	-4	-4	-6	-4	-3	-3	-4	-4	-2	-3	-2	-3	0	2	11

Last modified: November 19th, 2010.
Maintained by Dannie Durand (durand@cs.cmu.edu) and Annette McLeod.