| Class | Date | Day | Topic | Notes |
| 1 | Sept 12 | Wed | Introduction | - |
| 2 | Sept 17 | Mon | Compression 1 | - |
| 3 | Sept 19 | Wed | Compression 2 | - |
| 4 | Sept 24 | Mon | Compression 3 | Assign 1 due |
| 5 | Sept 26 | Wed | Cryptography 4 | - |
| 6 | Oct 1 | Mon | Cryptography 1 | - |
| 7 | Oct 3 | Wed | Cryptography 2 | - |
| 8 | Oct 8 | Mon | Cryptography 3 | - |
| 9 | Oct 10 | Wed | Cryptography 4 | - |
| 10 | Oct 15 | Mon | Cryptography 5 | - |
| 11 | Oct 17 | Wed | Error Correcting Codes 1 | - |
| - | Oct 22 | Mon | Mid Semester Break | - |
| 12 | Oct 24 | Wed | Error Correcting Codes 2 | - |
| 13 | Oct 29 | Mon | Linear Programming 1 | - |
| 14 | Oct 31 | Wed | Linear Programming 2 | - |
| 15 | Nov 5 | Mon | Integer Programming 1 | - |
| 16 | Nov 7 | Wed | Integer Programming 2 | - |
| 17 | Nov 12 | Mon | Patter Matching in Comp Bio 1 | - |
| 18 | Nov 14 | Wed | Patter Matching in Comp Bio 2 | - |
| 19 | Nov 19 | Mon | Patter Matching in Comp Bio 3 | - |
| - | Nov 21 | Wed | Thanksgiving | - |
| 20 | Nov 26 | Mon | Patter Matching in Comp Bio 4 | - |
| 21 | Nov 28 | Wed | Indexing and Searching 1 | - |
| 22 | Dec 3 | Mon | Indexing and Searching 2 | - |
| 23 | Dec 5 | Wed | Indexing and Searching 3 | - |
| 24 | Dec 10 | Mon | Indexing and Searching 4 | - |