- Yubin Kim, Reyyan Yeniterzi and Jamie Callan Overcoming Vocabulary Limitations in Microblogs, in Proceedings of the 21th Text REtrieval Conference (TREC 2012), National Institute of Standards and Technology, special publication. In press.
- Derry Tanti Wijaya, Reyyan Yeniterzi, Understanding Semantic Change of Words Over Centuries , in Proceedings of the 20th ACM Conference on Information and Knowledge Management (CIKM 2011) Workshop on DETecting and Exploiting Cultural diversiTy on the Social Web (DETECT 2011), Glasgow, UK, 2011.
- Reyyan Yeniterzi, Exploiting Morphology in Turkish Named Entity Recognition System, in Proceedings of the 49th Annual Meeting of the Association for Computational Linguistics - Student Session (ACL 2011), Portland, Oregon, USA, 2011.
- John Aberdeen, Samuel Bayer, Reyyan Yeniterzi, Ben Wellner, Cheryl Clark, David Hanauer, Bradley Malin and Lynette Hirschman, The MITRE Identification Scrubber Toolkit: Design, Training, Assessment , International Journal of Medical Informatics, 2010; 79(12): 849-859.
- Reyyan Yeniterzi and Kemal Oflazer, Syntax-to-Morphology Mapping in Factored Phrase-Based Statistical Machine Translation from English to Turkish , in Proceedings of the 48th Annual Meeting of the Association for Computational Linguistics (ACL 2010), Uppsala, Sweden, 2010.
- Reyyan Yeniterzi, John Aberdeen, Sam Bayer, Ben Wellner, Lynette Hirschman, and Bradley Malin, Effects of Personal Identifier Resynthesis on Clinical Text De-identification , Journal of the American Medical Informatics Association,17: 159-168, 2010.
- Esra Erdem and Reyyan Yeniterzi, Transforming Controlled Natural Language Biomedical Queries into Answer Set Programs, in Proceedings of the BioNLP 2009 Workshop at the 47th Annual Meeting of the Association for Computational Linguistics (ACL 2009), Boulder, CO, 2009.
- Suveyda Yeniterzi, Reyyan Yeniterzi, Alper Kucukural, Nilay Noyan and Ugur Sezerman, A New Approach to Measure the Similarities of Protein Structures Using Network Properties, Proceedings ot the Third International Symposium on Health Informatics and Bioinformatics (HIBIT), Istanbul, Turkey, 2008.
- Alper Kucukural, Reyyan Yeniterzi, Suveyda Yeniterzi and Ugur Sezerman, Evolutionary Selection of Minimum Number of Features for Classification of Gene Expression Data Using Genetic Algorithms, in Proceedings of the 9th Annual Conference on Genetic and Evolutionary Computation (GECCO), London, England, 2007.
- Suveyda Yeniterzi, Reyyan Yeniterzi, Alper Kucukural and Ugur Sezerman, Feature Selection with Genetic Algorithms on Medical Data, in Proceedings ot the Second International Symposium on Health Informatics and Bioinformatics (HIBIT), Antalya, Turkey, 2007..
- A New Approach to Measure the Similarities of Protein Structures Using Network Properties, presented in BIOSYSBIO 2008, Synthetic Biology, Systems Biology and Bioinformatics, April 20-22, 2008, London, UK.
- Transcription Factor Binding Site Determination Using Data Mining Methods, presented in FEBS 2006, Federation of European Biochemical Societies, June 24-29, 2006, Istanbul, Turkey.