Supplementary Information

Title: Techniques to cope with missing data in host-pathogen protein interaction prediction

Meghana Kshirsagar, Jaime Carbonell and Judith Klein-Seetharaman
ECCB 2012

Detailed description of features used
Gold standard list of interacting pairs
List of random pairs used as negative set
List of predictions from the classifier
Features of interacting pairs after imputation (in LibSVM format)
Features of the random protein pairs (negative set) after imputation (in LibSVM format)