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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 6309 1vlb_A)  (  454 1brw_A)     0.7459   0.7459   2.6821 (   1    9   21)   0     0.7459   0.7459    8   8
( 6309 1vlb_A)  ( 1557 1fm0_E)     0.6422   0.5286   4.5938 (   1    7   21)   0     0.6422   0.5286    8  12
( 6309 1vlb_A)  ( 1586 1fo4_A)     0.8750   0.7000   0.6245 (   0    8   21)   0     0.8750   0.7000    8  10
( 6309 1vlb_A)  ( 2906 1jj2_H)     0.7499   0.6000   3.2790 (   0    4   15)   0     0.7499   0.6000    8  10
( 6309 1vlb_A)  ( 3038 1jro_B)     0.7459   0.7459   0.9090 (   1    9   21)   0     0.7459   0.7459    8   8
( 6309 1vlb_A)  ( 4137 1n62_B)     0.7007   0.5481   0.9056 (   1    8   21)   0     0.7007   0.5481    8  12
( 6309 1vlb_A)  ( 4485 1o4u_A)     0.4999   0.4444   4.9052 (   0    3    6)   0     0.4999   0.4444    8   9
( 6309 1vlb_A)  ( 5267 1qap_A)     0.6240   0.8293   7.2026 (   0    1   10)   0     0.6240   0.8293    8   6
( 6309 1vlb_A)  ( 5411 1qpo_A)     0.6240   0.7124   7.2215 (   0    1   10)   0     0.6240   0.7124    8   7
( 6309 1vlb_A)  ( 6071 1uou_A)     0.8748   0.8748   3.0874 (   0    9   21)   0     0.8748   0.8748    8   8
( 6309 1vlb_A)  ( 6309 1vlb_A)     1.0000   1.0000   0.0000 (   0   15   28)   0     1.0000   1.0000    8   8
( 6309 1vlb_A)  ( 6547 2tpt  )     0.7459   0.7459   2.6681 (   1    9   21)   0     0.7459   0.7459    8   8

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