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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 1586 1fo4_A)  (  454 1brw_A)     0.6237   0.7007   2.7339 (   1    8   21)   0     0.6237   0.7007   10   8
( 1586 1fo4_A)  ( 1557 1fm0_E)     0.5999   0.4999   4.5782 (   0    3   15)   0     0.5999   0.4999   10  12
( 1586 1fo4_A)  ( 1586 1fo4_A)     1.0000   1.0000   0.0000 (   0   30   45)   0     1.0000   1.0000   10  10
( 1586 1fo4_A)  ( 2906 1jj2_H)     0.6000   0.6000   3.2717 (   0    3   15)   0     0.6000   0.6000   10  10
( 1586 1fo4_A)  ( 3038 1jro_B)     0.7846   0.9559   0.9282 (   1   15   28)   0     0.7846   0.9559   10   8
( 1586 1fo4_A)  ( 4137 1n62_B)     0.7846   0.6603   1.0813 (   1   15   28)   0     0.7846   0.6603   10  12
( 1586 1fo4_A)  ( 4485 1o4u_A)     0.3994   0.4434  11.2790 (   0    0    6)   0     0.3994   0.4434   10   9
( 1586 1fo4_A)  ( 5267 1qap_A)     0.4996   0.8289   7.3682 (   0    1   10)   0     0.4996   0.8289   10   6
( 1586 1fo4_A)  ( 5411 1qpo_A)     0.4997   0.7123   7.3215 (   0    1   10)   0     0.4997   0.7123   10   7
( 1586 1fo4_A)  ( 6071 1uou_A)     0.6999   0.8748   3.1527 (   0    8   21)   0     0.6999   0.8748   10   8
( 1586 1fo4_A)  ( 6309 1vlb_A)     0.7000   0.8750   0.6245 (   0    8   21)   0     0.7000   0.8750   10   8
( 1586 1fo4_A)  ( 6547 2tpt  )     0.6237   0.7007   2.6937 (   1    8   21)   0     0.6237   0.7007   10   8

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