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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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(  816 1deu_A)  (  635 1cmx_A)     0.3316   0.3811  10.3865 (   1    9   10)   0     0.5310   0.6107   15  13
(  816 1deu_A)  (  672 1cs8_A)     0.8000   0.6000   1.6096 (   0   53   66)   0     0.8000   0.6000   15  20
(  816 1deu_A)  (  688 1cv8  )     0.6643   0.6944   4.9236 (   5   44   55)   0     0.6643   0.6944   15  14
(  816 1deu_A)  (  816 1deu_A)     1.0000   1.0000   0.0000 (   0   93  105)   0     1.0000   1.0000   15  15
(  816 1deu_A)  (  861 1dki_A)     0.6665   0.5881   4.4962 (   0   32   45)   0     0.6665   0.5881   15  17
(  816 1deu_A)  ( 1007 1e2t_A)     0.3322   0.2773   9.3999 (   1   10   10)   0     0.3999   0.3333   15  18
(  816 1deu_A)  ( 1272 1euv_A)     0.2666   0.2500   8.2675 (   0    5    6)   0     0.3331   0.3239   15  16
(  816 1deu_A)  ( 1993 1gx3_A)     0.3333   0.2632   5.0433 (   0    8   10)   0     0.4000   0.3158   15  19
(  816 1deu_A)  ( 2607 1iu4_A)     0.4723   0.4530   6.1962 (   3   18   28)   0     0.4723   0.4530   15  16
(  816 1deu_A)  ( 3306 1khq_A)     0.7332   0.9162   2.2388 (   1   44   55)   0     0.7332   0.9162   15  12
(  816 1deu_A)  ( 3912 1mdw_A)     0.6238   0.4886   5.9599 (   4   36   45)   0     0.6238   0.4886   15  20
(  816 1deu_A)  ( 3914 1me4_A)     0.7332   0.7332   2.4546 (   1   44   55)   0     0.7332   0.7332   15  15
(  816 1deu_A)  ( 4188 1nbf_A)     0.3021   0.1970   7.2705 (   1    4   10)   0     0.3769   0.2689   15  25
(  816 1deu_A)  ( 4300 1nln_A)     0.2667   0.3077   5.7989 (   0    4    6)   0     0.2673   0.3077   15  13
(  816 1deu_A)  ( 5392 1qmy_A)     0.5333   0.6153   3.8907 (   0   22   28)   0     0.5333   0.6153   15  13
(  816 1deu_A)  ( 5910 1the_A)     0.8000   0.9230   2.3569 (   0   54   66)   0     0.8000   0.9230   15  13
(  816 1deu_A)  ( 5970 1uch  )     0.3307   0.3792  10.8786 (   1    8   10)   0     0.6596   0.7551   15  13
(  816 1deu_A)  ( 6041 1ukf_A)     0.5331   0.6148   6.3890 (   0   17   28)   0     0.5331   0.6148   15  13
(  816 1deu_A)  ( 6286 1vjj_A)     0.2667   0.1739   7.1701 (   0    3    6)   0     0.3921   0.2919   15  23
(  816 1deu_A)  ( 6414 2cb5_A)     0.6660   0.3703   6.0469 (   0   33   45)   0     0.6660   0.3703   15  27
(  816 1deu_A)  ( 6571 3gcb  )     0.7313   0.3928   6.9992 (   1   43   55)   0     0.7313   0.3928   15  28

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