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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 1330 1ezv_B)  ( 1327 1ezv_A)     0.4738   0.4486   3.7225 (   5   24   36)   0     0.4738   0.4486    9  14
( 1330 1ezv_B)  ( 1328 1ezv_A)     0.9769   0.5981   3.7138 (   1   18   36)   0     0.9769   0.5981    9  15
( 1330 1ezv_B)  ( 1329 1ezv_B)     0.5547   0.4165   8.1012 (   0    5   10)   0     0.5547   0.4165    9  12
( 1330 1ezv_B)  ( 1330 1ezv_B)     1.0000   1.0000   0.0000 (   0   24   36)   0     1.0000   1.0000    9   9
( 1330 1ezv_B)  ( 2265 1hr6_A)     0.9844   0.6411   3.4650 (   1   20   36)   0     0.9844   0.6411    9  14
( 1330 1ezv_B)  ( 2266 1hr6_A)     0.8886   0.5714   3.4588 (   0   16   28)   0     0.8886   0.5714    9  14
( 1330 1ezv_B)  ( 2267 1hr6_B)     0.9812   0.6407   3.5017 (   1   19   36)   0     0.9812   0.6407    9  14
( 1330 1ezv_B)  ( 2268 1hr6_B)     0.9770   0.6402   3.5550 (   1   18   36)   0     0.9770   0.6402    9  14
( 1330 1ezv_B)  ( 2750 1j6w_A)     0.5554   0.6247   5.5404 (   0    4   10)   0     0.6662   0.7492    9   8
( 1330 1ezv_B)  ( 2773 1j98_A)     0.5553   0.6245   6.0969 (   0    4   10)   0     0.6660   0.7488    9   8
( 1330 1ezv_B)  ( 3494 1l0l_A)     0.9769   0.6402   3.5850 (   1   18   36)   0     0.9769   0.6402    9  14
( 1330 1ezv_B)  ( 3495 1l0l_B)     0.8182   0.6129   3.8053 (   2   19   36)   0     0.8182   0.6129    9  14
( 1330 1ezv_B)  ( 3496 1l0l_B)     0.8886   0.6666   3.5106 (   0   15   28)   0     0.8886   0.6666    9  12

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