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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 4586 1obb_A)  (  320 1b8p_A)     0.4735   0.7486   6.2495 (   0   27   36)   0     0.4735   0.7486   19  12
( 4586 1obb_A)  ( 1322 1ez4_A)     0.3133   0.5125   6.8302 (   2   15   15)   0     0.3133   0.5125   19  11
( 4586 1obb_A)  ( 1965 1gv1_A)     0.4542   0.6192   6.3418 (   4   29   36)   0     0.4542   0.6192   19  12
( 4586 1obb_A)  ( 2329 1hye_A)     0.4542   0.6192   6.1048 (   4   29   36)   0     0.4542   0.6192   19  12
( 4586 1obb_A)  ( 2331 1hyh_A)     0.3684   0.9911   6.9980 (   0   19   21)   0     0.3684   0.9911   19   7
( 4586 1obb_A)  ( 3656 1lld_A)     0.3158   0.8567   4.0181 (   0   14   15)   0     0.3158   0.8567   19   7
( 4586 1obb_A)  ( 4521 1o6z_A)     0.4677   0.7912   6.5393 (   3   30   36)   0     0.4677   0.7912   19  10
( 4586 1obb_A)  ( 4586 1obb_A)     1.0000   1.0000   0.0000 (   0  154  171)   0     1.0000   1.0000   19  19
( 4586 1obb_A)  ( 5878 1t2d_A)     0.2583   0.3991   3.7797 (   2   10   10)   0     0.2925   0.3991   19  11
( 4586 1obb_A)  ( 5943 1u8x_X)     0.7363   0.8736   5.1133 (   1   79   91)   0     0.7363   0.8736   19  16
( 4586 1obb_A)  ( 6421 2cmd  )     0.4735   0.8964   6.3575 (   0   28   36)   0     0.4735   0.8964   19  10
( 4586 1obb_A)  ( 6628 6ldh  )     0.3684   0.9927   6.6449 (   0   19   21)   0     0.3684   0.9927   19   7
( 4586 1obb_A)  ( 6636 7mdh_A)     0.2105   0.4439   9.5046 (   0    5    6)   0     0.2105   0.4439   19   9

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