------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 5723 1rxx_A) ( 481 1bwd_A) 0.6156 0.7966 2.1974 ( 6 75 190) 0 0.6546 0.8681 32 24 ( 5723 1rxx_A) ( 1738 1g61_A) 0.2187 0.3684 2.7285 ( 0 7 21) 0 0.5558 0.8937 32 19 ( 5723 1rxx_A) ( 1739 1g62_A) 0.1875 0.3158 3.5117 ( 0 2 15) 0 0.5923 0.9809 32 19 ( 5723 1rxx_A) ( 2117 1h70_A) 0.5234 0.5904 2.8600 ( 10 62 190) 0 0.5937 0.8631 32 22 ( 5723 1rxx_A) ( 2833 1jdw ) 0.6245 0.7396 3.0872 ( 2 54 190) 0 0.6534 0.7712 32 27 ( 5723 1rxx_A) ( 5723 1rxx_A) 1.0000 1.0000 0.0000 ( 0 354 496) 0 1.0000 1.0000 32 32 ( 5723 1rxx_A) ( 5782 1s9r_A) 0.9169 0.8913 2.2979 ( 16 272 435) 0 0.9169 0.8913 32 33 -------------------------------------------------------------------------------------------------------------------------