-------------------------------------------------------------------------------------------------------------------------

Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

-------------------------------------------------------------------------------------------------------------------------
(  481 1bwd_A)  (  481 1bwd_A)     1.0000   1.0000   0.0000 (   0  169  276)   0     1.0000   1.0000   24  24
(  481 1bwd_A)  ( 1738 1g61_A)     0.7029   0.8778   5.4560 (   3   52  136)   1     0.7029   0.8778   24  19
(  481 1bwd_A)  ( 1739 1g62_A)     0.7485   0.9426   4.5069 (   2   54  153)   1     0.7485   0.9426   24  19
(  481 1bwd_A)  ( 2117 1h70_A)     0.8193   0.8877   2.6528 (   5   81  190)   0     0.8193   0.8877   24  22
(  481 1bwd_A)  ( 2833 1jdw  )     0.9119   0.8249   2.2364 (   8  112  253)   0     0.9119   0.8249   24  27
(  481 1bwd_A)  ( 5723 1rxx_A)     0.7966   0.6156   2.1974 (   6   75  190)   0     0.8681   0.6546   24  32
(  481 1bwd_A)  ( 5782 1s9r_A)     0.7995   0.6184   2.7201 (   9   97  210)   0     0.8289   0.6184   24  33

-------------------------------------------------------------------------------------------------------------------------