------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 2117 1h70_A) ( 481 1bwd_A) 0.8877 0.8193 2.6528 ( 5 81 190) 0 0.8877 0.8193 22 24 ( 2117 1h70_A) ( 1738 1g61_A) 0.4545 0.5263 2.3728 ( 0 13 45) 0 0.7725 0.8942 22 19 ( 2117 1h70_A) ( 1739 1g62_A) 0.5000 0.5789 3.1829 ( 0 20 55) 0 0.8177 0.9463 22 19 ( 2117 1h70_A) ( 2117 1h70_A) 1.0000 1.0000 0.0000 ( 0 127 231) 0 1.0000 1.0000 22 22 ( 2117 1h70_A) ( 2833 1jdw ) 0.8646 0.7237 2.4984 ( 4 53 190) 0 0.8646 0.7246 22 27 ( 2117 1h70_A) ( 5723 1rxx_A) 0.5904 0.5234 2.8600 ( 10 62 190) 0 0.8633 0.5937 22 32 ( 2117 1h70_A) ( 5782 1s9r_A) 0.6439 0.5640 2.5332 ( 16 108 231) 0 0.9125 0.6303 22 33 -------------------------------------------------------------------------------------------------------------------------