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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 1739 1g62_A)  (  481 1bwd_A)     0.9426   0.7485   4.5069 (   2   54  153)   1     0.9426   0.7485   19  24
( 1739 1g62_A)  ( 1738 1g61_A)     0.9386   0.9386   1.9442 (   4   86  153)   0     0.9463   0.9463   19  19
( 1739 1g62_A)  ( 1739 1g62_A)     1.0000   1.0000   0.0000 (   0  113  171)   0     1.0000   1.0000   19  19
( 1739 1g62_A)  ( 2117 1h70_A)     0.5789   0.5000   3.1829 (   0   20   55)   0     0.9463   0.8177   19  22
( 1739 1g62_A)  ( 2833 1jdw  )     0.3158   0.2222   2.9742 (   0    6   15)   0     0.9686   0.6980   19  27
( 1739 1g62_A)  ( 5723 1rxx_A)     0.9809   0.5923   4.8791 (   3   58  171)   1     0.9809   0.5923   19  32
( 1739 1g62_A)  ( 5782 1s9r_A)     0.9968   0.5756   4.5094 (   2   70  171)   1     0.9968   0.5756   19  33

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