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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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(  149 1aln  )  (  149 1aln  )     1.0000   1.0000   0.0000 (   0   47   55)   0     1.0000   1.0000   11  11
(  149 1aln  )  (  150 1aln  )     0.6363   0.8749   2.5836 (   0   13   21)   0     0.6363   0.8749   11   8
(  149 1aln  )  ( 1772 1g8m_A)     0.7271   0.2667   4.0841 (   0   20   28)   0     0.7271   0.2667   11  30
(  149 1aln  )  ( 3058 1jtk_A)     0.6364   0.8750   1.9232 (   0   12   21)   0     0.6364   0.8750   11   8
(  149 1aln  )  ( 4664 1oi0_A)     0.4545   0.7141   4.0636 (   0    5   10)   0     0.4545   0.7141   11   7
(  149 1aln  )  ( 4913 1p6o_A)     0.6363   0.5384   2.9943 (   0   12   21)   0     0.7233   0.6137   11  13

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