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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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(  830 1dgm_A)  (  483 1bx4_A)     0.9509   0.9509   3.1519 (  14  277  351)   0     0.9509   0.9509   28  28
(  830 1dgm_A)  (  830 1dgm_A)     1.0000   1.0000   0.0000 (   0  311  378)   0     1.0000   1.0000   28  28
(  830 1dgm_A)  ( 1076 1e8c_A)     0.2143   0.3333   3.9376 (   0   10   15)   0     0.5353   0.8296   28  18
(  830 1dgm_A)  ( 1819 1gg4_A)     0.5707   0.9877   7.5772 (   1   73  120)   0     0.5707   0.9877   28  16
(  830 1dgm_A)  ( 2740 1j5v_A)     0.7800   0.9045   3.6790 (   9  172  231)   0     0.7820   0.9087   28  24
(  830 1dgm_A)  ( 2748 1j6u_A)     0.3127   0.4533   6.6998 (   4   22   36)   0     0.5706   0.9317   28  17
(  830 1dgm_A)  ( 2817 1jbw_A)     0.5353   0.7866   7.0123 (   1   64  105)   0     0.5353   0.7866   28  19
(  830 1dgm_A)  ( 3480 1kyh_A)     0.5713   0.8410   4.6145 (   2   81  120)   0     0.5713   0.8410   28  19
(  830 1dgm_A)  ( 3629 1lhp_A)     0.5560   0.8067   6.5141 (   7   69  120)   0     0.5560   0.8744   28  17
(  830 1dgm_A)  ( 4470 1o14_A)     0.4286   0.5217   3.9832 (   0   49   66)   0     0.7352   0.8756   28  23
(  830 1dgm_A)  ( 4504 1o5z_A)     0.2559   0.2622   6.7145 (  17   45   66)   0     0.4997   0.6983   28  20
(  830 1dgm_A)  ( 4879 1p3d_A)     0.2143   0.3333   6.9536 (   0    8   15)   0     0.5705   0.8804   28  18
(  830 1dgm_A)  ( 4945 1p9o_A)     0.1786   0.2381   4.3486 (   0    8   10)   0     0.5355   0.7133   28  21
(  830 1dgm_A)  ( 5656 1rkd  )     0.4286   0.5000   3.0272 (   0   48   66)   0     0.6517   0.7031   28  24
(  830 1dgm_A)  ( 5945 1ua4_A)     0.3571   0.3030   2.2247 (   0   36   45)   0     0.8617   0.7433   28  33
(  830 1dgm_A)  ( 5955 1ub0_A)     0.6063   0.9903   4.5949 (   4   94  136)   0     0.6063   0.9903   28  17
(  830 1dgm_A)  ( 6155 1v1a_A)     0.8089   0.9320   3.7744 (  11  181  253)   0     0.8089   0.9320   28  24
(  830 1dgm_A)  ( 6194 1v8a_A)     0.5714   0.7617   3.7378 (   1   85  120)   0     0.5714   0.7617   28  21
(  830 1dgm_A)  ( 6261 1vi9_A)     0.5713   0.8409   4.6339 (   2   79  120)   0     0.6365   0.9069   28  19
(  830 1dgm_A)  ( 6304 1vk4_A)     0.6485   0.6682   3.7814 (  12  122  171)   0     0.6704   0.6830   28  27
(  830 1dgm_A)  ( 6553 2uag_A)     0.4285   0.7983   5.8210 (   1   42   66)   0     0.5352   0.9894   28  15

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