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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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(  818 1df7_A)  (  168 1aoe_A)     0.9972   0.8115   2.5298 (   2   62   78)   0     0.9972   0.8115   13  16
(  818 1df7_A)  (  710 1cz3_A)     0.9968   0.9264   2.9741 (   2   61   78)   0     0.9968   0.9264   13  14
(  818 1df7_A)  (  818 1df7_A)     1.0000   1.0000   0.0000 (   0   64   78)   0     1.0000   1.0000   13  13
(  818 1df7_A)  ( 2724 1j3k_A)     0.9997   0.8124   2.3430 (   1   60   78)   0     0.9997   0.8124   13  16
(  818 1df7_A)  ( 3067 1juv_A)     0.9223   0.7057   3.8306 (   1   52   66)   0     0.9223   0.7057   13  17
(  818 1df7_A)  ( 3358 1kmv_A)     0.9066   0.9066   2.1945 (   3   53   66)   0     0.9066   0.9066   13  13
(  818 1df7_A)  ( 5504 1qzf_A)     0.9969   0.9264   2.0015 (   2   60   78)   0     0.9969   0.9264   13  14
(  818 1df7_A)  ( 5601 1ra9  )     0.9975   0.9975   2.3339 (   2   64   78)   0     0.9975   0.9975   13  13
(  818 1df7_A)  ( 6211 1vdr_A)     0.9194   0.9945   3.3403 (   2   53   66)   0     0.9194   0.9945   13  12
(  818 1df7_A)  ( 6563 3dfr  )     0.9997   0.9997   2.5905 (   1   63   78)   0     0.9997   0.9997   13  13
(  818 1df7_A)  ( 6608 4cd2_A)     0.9862   0.7610   3.5637 (   3   62   78)   0     0.9862   0.7610   13  17

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