-------------------------------------------------------------------------------------------------------------------------

Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

-------------------------------------------------------------------------------------------------------------------------
( 2269 1hrd_A)  (   41 1a4i_A)     0.4615   0.8560   5.0192 (   0    2   15)   0     0.4615   0.8560   13   7
( 2269 1hrd_A)  (  258 1b0a_A)     0.4614   0.8550   5.8876 (   0    0   15)   0     0.4614   0.8550   13   7
( 2269 1hrd_A)  (  505 1c1d_A)     0.6918   0.9966   5.4698 (   0   25   36)   0     0.6918   0.9966   13   9
( 2269 1hrd_A)  ( 1116 1edz_A)     0.4615   0.7492   5.5297 (   0    3   15)   0     0.4615   0.7492   13   8
( 2269 1hrd_A)  ( 1947 1gtm_A)     0.6923   0.9997   3.0923 (   0   23   36)   0     0.6923   0.9997   13   9
( 2269 1hrd_A)  ( 2015 1gz3_A)     0.3845   0.2941   6.7500 (   0    5   10)   0     0.5382   0.4532   13  17
( 2269 1hrd_A)  ( 2269 1hrd_A)     1.0000   1.0000   0.0000 (   0   61   78)   0     1.0000   1.0000   13  13
( 2269 1hrd_A)  ( 2308 1hwx_A)     0.8459   0.9163   3.5171 (   0   38   55)   0     0.8459   0.9163   13  12
( 2269 1hrd_A)  ( 3609 1leh_A)     0.6151   0.9963   5.6089 (   0   18   28)   0     0.6151   0.9963   13   8
( 2269 1hrd_A)  ( 3733 1lu9_A)     0.4615   0.6664   4.6632 (   0    6   15)   0     0.4615   0.6664   13   9
( 2269 1hrd_A)  ( 4350 1npy_A)     0.4419   0.5385   5.2166 (   1    7   15)   0     0.4611   0.5984   13  10
( 2269 1hrd_A)  ( 4446 1nyt_A)     0.4495   0.6040   5.2370 (   1    8   15)   0     0.4495   0.6040   13   9
( 2269 1hrd_A)  ( 6256 1vi2_A)     0.4420   0.5385   4.9185 (   1    7   15)   0     0.4420   0.5385   13  10

-------------------------------------------------------------------------------------------------------------------------