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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 2015 1gz3_A)  (   41 1a4i_A)     0.4117   0.9945   6.1718 (   0    6   21)   0     0.4117   0.9945   17   7
( 2015 1gz3_A)  (  258 1b0a_A)     0.3529   0.8567   3.9197 (   0    0   15)   0     0.3529   0.8569   17   7
( 2015 1gz3_A)  (  505 1c1d_A)     0.3529   0.6665   4.2938 (   0    9   15)   0     0.4071   0.6665   17   9
( 2015 1gz3_A)  ( 1116 1edz_A)     0.2941   0.6236   7.9547 (   0    4   10)   0     0.3529   0.7491   17   8
( 2015 1gz3_A)  ( 1947 1gtm_A)     0.2941   0.5554   5.6002 (   0    7   10)   0     0.4116   0.7749   17   9
( 2015 1gz3_A)  ( 2015 1gz3_A)     1.0000   1.0000   0.0000 (   0  108  136)   0     1.0000   1.0000   17  17
( 2015 1gz3_A)  ( 2269 1hrd_A)     0.2941   0.3845   6.7500 (   0    5   10)   0     0.4532   0.5382   17  13
( 2015 1gz3_A)  ( 2308 1hwx_A)     0.3344   0.3527   5.9246 (   5   18   28)   0     0.4432   0.4973   17  12
( 2015 1gz3_A)  ( 3609 1leh_A)     0.2941   0.6249   3.8070 (   0    7   10)   0     0.3529   0.7483   17   8
( 2015 1gz3_A)  ( 3733 1lu9_A)     0.4118   0.7777   2.9880 (   0   10   21)   0     0.4118   0.7777   17   9
( 2015 1gz3_A)  ( 4350 1npy_A)     0.2353   0.4000   3.7723 (   0    3    6)   0     0.3529   0.5990   17  10
( 2015 1gz3_A)  ( 4446 1nyt_A)     0.2941   0.5554   5.5368 (   0    1   10)   0     0.3049   0.5554   17   9
( 2015 1gz3_A)  ( 6256 1vi2_A)     0.2941   0.4998   6.3270 (   0    1   10)   0     0.2941   0.4998   17  10

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