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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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(  809 1ddz_A)  (  809 1ddz_A)     1.0000   1.0000   0.0000 (   0   84  105)   0     1.0000   1.0000   15  15
(  809 1ddz_A)  ( 1194 1ekj_A)     0.8159   0.9061   3.1026 (   5   60   78)   0     0.8159   0.9061   15  13
(  809 1ddz_A)  ( 1731 1g5c_A)     0.5999   0.8176   4.4539 (   0   26   36)   0     0.5999   0.8176   15  11
(  809 1ddz_A)  ( 2414 1i6p_A)     0.8595   0.9186   2.8052 (   3   61   78)   0     0.8905   0.9416   15  14
(  809 1ddz_A)  ( 6524 2rsl_A)     0.4665   0.8721   6.1954 (   0    8   21)   0     0.4665   0.8721   15   8

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