------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 825 1dfm_A) ( 62 1a79_A) 0.3529 0.8569 3.5655 ( 0 9 15) 0 0.4118 0.9989 17 7 ( 825 1dfm_A) ( 222 1avq_A) 0.2353 0.2857 7.7150 ( 0 5 6) 0 0.2859 0.3370 17 14 ( 825 1dfm_A) ( 250 1azo ) 0.2353 0.2857 6.0167 ( 0 2 6) 0 0.3844 0.4387 17 14 ( 825 1dfm_A) ( 336 1bam ) 0.7024 0.8480 4.1423 ( 2 38 66) 0 0.7024 0.8480 17 14 ( 825 1dfm_A) ( 581 1cfr ) 0.2941 0.3125 3.8056 ( 0 4 10) 0 0.3726 0.3777 17 16 ( 825 1dfm_A) ( 621 1ckq_A) 0.5292 0.5292 5.8755 ( 0 11 36) 0 0.5292 0.5292 17 17 ( 825 1dfm_A) ( 717 1d02_A) 0.2941 0.3845 8.1465 ( 0 4 10) 0 0.3604 0.4072 17 13 ( 825 1dfm_A) ( 788 1dc1_A) 0.3529 0.2857 7.1571 ( 0 8 15) 0 0.4464 0.3926 17 21 ( 825 1dfm_A) ( 825 1dfm_A) 1.0000 1.0000 0.0000 ( 0 111 136) 0 1.0000 1.0000 17 17 ( 825 1dfm_A) ( 886 1dmu_A) 0.2928 0.2376 8.0246 ( 1 8 10) 0 0.2928 0.2590 17 21 ( 825 1dfm_A) ( 982 1dzf_A) 0.2941 0.4991 9.4270 ( 0 2 10) 0 0.3526 0.5953 17 10 ( 825 1dfm_A) ( 1276 1ev7_A) 0.2701 0.2644 6.7787 ( 3 9 15) 0 0.4698 0.4438 17 18 ( 825 1dfm_A) ( 1367 1f1z_A) 0.2353 0.3636 3.7069 ( 0 1 6) 0 0.3528 0.5444 17 11 ( 825 1dfm_A) ( 1512 1fiu_A) 0.2353 0.2222 6.5974 ( 0 3 6) 0 0.3913 0.3731 17 18 ( 825 1dfm_A) ( 1665 1fzr_A) 0.2353 0.4438 10.0570 ( 0 3 6) 0 0.2937 0.5464 17 9 ( 825 1dfm_A) ( 1808 1gef_A) 0.2353 0.4444 4.8346 ( 0 1 6) 0 0.4118 0.7776 17 9 ( 825 1dfm_A) ( 2210 1hh1_A) 0.2353 0.4444 4.4807 ( 0 1 6) 0 0.3529 0.6645 17 9 ( 825 1dfm_A) ( 2707 1j23_A) 0.2353 0.3998 8.0419 ( 0 3 6) 0 0.3999 0.5861 17 10 ( 825 1dfm_A) ( 3258 1kc6_A) 0.2918 0.2918 9.9002 ( 1 7 10) 0 0.4883 0.4883 17 17 ( 825 1dfm_A) ( 3365 1knv_A) 0.2941 0.3333 3.7795 ( 0 3 10) 0 0.4595 0.4894 17 15 ( 825 1dfm_A) ( 4182 1na6_A) 0.2353 0.3633 10.4315 ( 0 1 6) 0 0.2941 0.4545 17 11 ( 825 1dfm_A) ( 5514 1r0v_A) 0.2668 0.2796 4.4977 ( 5 14 21) 0 0.2941 0.7139 17 7 ( 825 1dfm_A) ( 5516 1r0v_A) 0.2506 0.2595 4.6487 ( 5 13 21) 0 0.2644 0.4998 17 8 ( 825 1dfm_A) ( 5795 1sdo_A) 0.6450 0.7296 4.9177 ( 2 40 55) 0 0.6450 0.7296 17 15 ( 825 1dfm_A) ( 5867 1sx5_A) 0.2941 0.3125 5.2350 ( 0 5 10) 0 0.2941 0.3125 17 16 ( 825 1dfm_A) ( 6324 1vsr_A) 0.3528 0.7431 9.4095 ( 0 7 15) 0 0.4690 0.9416 17 8 ( 825 1dfm_A) ( 6453 2fok_A) 0.4118 0.5833 3.2308 ( 0 11 21) 0 0.4706 0.6665 17 12 ( 825 1dfm_A) ( 6592 3pvi_A) 0.2353 0.4998 6.1643 ( 0 2 6) 0 0.2859 0.4998 17 8 -------------------------------------------------------------------------------------------------------------------------