------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 581 1cfr ) ( 62 1a79_A) 0.2500 0.5708 7.3526 ( 0 3 6) 0 0.3125 0.7140 16 7 ( 581 1cfr ) ( 222 1avq_A) 0.2500 0.2857 8.0879 ( 0 1 6) 0 0.3250 0.3473 16 14 ( 581 1cfr ) ( 250 1azo ) 0.3121 0.3563 14.1144 ( 0 8 10) 0 0.3121 0.3563 16 14 ( 581 1cfr ) ( 336 1bam ) 0.2500 0.2857 5.3384 ( 0 0 6) 0 0.4993 0.5701 16 14 ( 581 1cfr ) ( 581 1cfr ) 1.0000 1.0000 0.0000 ( 0 94 120) 0 1.0000 1.0000 16 16 ( 581 1cfr ) ( 621 1ckq_A) 0.6086 0.5760 7.6282 ( 2 22 45) 0 0.6086 0.5760 16 17 ( 581 1cfr ) ( 717 1d02_A) 0.5623 0.6918 5.4551 ( 0 19 36) 0 0.5829 0.6918 16 13 ( 581 1cfr ) ( 788 1dc1_A) 0.6161 0.4739 6.9391 ( 2 26 45) 0 0.6161 0.4739 16 21 ( 581 1cfr ) ( 825 1dfm_A) 0.3125 0.2941 3.8056 ( 0 4 10) 0 0.3777 0.3726 16 17 ( 581 1cfr ) ( 886 1dmu_A) 0.2500 0.1905 6.3936 ( 0 5 6) 0 0.2524 0.2403 16 21 ( 581 1cfr ) ( 982 1dzf_A) 0.3125 0.4998 6.2511 ( 0 2 10) 0 0.5490 0.7920 16 10 ( 581 1cfr ) ( 1276 1ev7_A) 0.3249 0.3020 9.9375 ( 3 12 15) 0 0.3249 0.3020 16 18 ( 581 1cfr ) ( 1367 1f1z_A) 0.4374 0.6360 5.5425 ( 0 11 21) 0 0.4375 0.6361 16 11 ( 581 1cfr ) ( 1512 1fiu_A) 0.6385 0.5821 5.5698 ( 4 36 55) 0 0.6675 0.5997 16 18 ( 581 1cfr ) ( 1665 1fzr_A) 0.2500 0.4443 6.5362 ( 0 0 6) 0 0.3125 0.5551 16 9 ( 581 1cfr ) ( 1808 1gef_A) 0.2500 0.4443 7.3348 ( 0 3 6) 0 0.3124 0.5545 16 9 ( 581 1cfr ) ( 2210 1hh1_A) 0.2652 0.2739 5.2809 ( 4 11 21) 0 0.3124 0.5546 16 9 ( 581 1cfr ) ( 2707 1j23_A) 0.3125 0.4996 7.7877 ( 0 4 10) 0 0.4983 0.7834 16 10 ( 581 1cfr ) ( 3258 1kc6_A) 0.2500 0.2353 5.8914 ( 0 3 6) 0 0.4435 0.4264 16 17 ( 581 1cfr ) ( 3365 1knv_A) 0.9374 0.9999 1.7347 ( 1 76 105) 0 0.9374 0.9999 16 15 ( 581 1cfr ) ( 4182 1na6_A) 0.2753 0.2934 9.9281 ( 1 3 15) 0 0.3675 0.5034 16 11 ( 581 1cfr ) ( 5514 1r0v_A) 0.2500 0.5698 9.1897 ( 0 3 6) 0 0.3124 0.7102 16 7 ( 581 1cfr ) ( 5516 1r0v_A) 0.2500 0.4998 6.2524 ( 0 2 6) 0 0.3790 0.5000 16 8 ( 581 1cfr ) ( 5795 1sdo_A) 0.3125 0.3333 4.0890 ( 0 4 10) 0 0.3749 0.3998 16 15 ( 581 1cfr ) ( 5867 1sx5_A) 0.2752 0.2752 10.6355 ( 2 6 15) 0 0.3117 0.3117 16 16 ( 581 1cfr ) ( 6324 1vsr_A) 0.3124 0.6225 9.1718 ( 0 3 10) 0 0.4374 0.8734 16 8 ( 581 1cfr ) ( 6453 2fok_A) 0.5611 0.7441 4.5776 ( 1 18 36) 0 0.5611 0.7441 16 12 ( 581 1cfr ) ( 6592 3pvi_A) 0.2500 0.4997 6.9291 ( 0 5 6) 0 0.4020 0.5523 16 8 -------------------------------------------------------------------------------------------------------------------------