-------------------------------------------------------------------------------------------------------------------------

Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

-------------------------------------------------------------------------------------------------------------------------
( 5514 1r0v_A)  (   62 1a79_A)     0.9998   0.9998   2.7653 (   0   17   21)   0     0.9998   0.9998    7   7
( 5514 1r0v_A)  (  222 1avq_A)     0.8567   0.4286   4.0849 (   0   11   15)   0     0.8567   0.4286    7  14
( 5514 1r0v_A)  (  250 1azo  )     0.5714   0.2857   3.3302 (   0    4    6)   0     0.7141   0.3571    7  14
( 5514 1r0v_A)  (  336 1bam  )     0.5692   0.2856   9.9592 (   0    1    6)   1     0.5692   0.2856    7  14
( 5514 1r0v_A)  (  581 1cfr  )     0.5698   0.2500   9.1897 (   0    3    6)   0     0.7102   0.3124    7  16
( 5514 1r0v_A)  (  621 1ckq_A)     0.3773   0.2286  15.5620 (   1    4    6)   0     0.5695   0.2353    7  17
( 5514 1r0v_A)  (  717 1d02_A)   nil
( 5514 1r0v_A)  (  788 1dc1_A)     0.5713   0.1905   4.8341 (   0    4    6)   0     0.5713   0.3021    7  21
( 5514 1r0v_A)  (  825 1dfm_A)     0.5712   0.2353   5.8537 (   0    3    6)   0     0.7139   0.2941    7  17
( 5514 1r0v_A)  (  886 1dmu_A)     0.7677   0.2852   6.4461 (   1   10   15)   0     0.7677   0.2852    7  21
( 5514 1r0v_A)  (  982 1dzf_A)     0.1993   0.1970   6.3901 (   1    2    6)   0     0.5696   0.3997    7  10
( 5514 1r0v_A)  ( 1276 1ev7_A)     0.4864   0.3186   5.2799 (   2   10   15)   0     0.4864   0.3186    7  18
( 5514 1r0v_A)  ( 1367 1f1z_A)     0.4453   0.3418   7.8691 (   1    5    6)   0     0.4453   0.3418    7  11
( 5514 1r0v_A)  ( 1512 1fiu_A)     0.5710   0.2222   6.5791 (   0    3    6)   0     0.5710   0.2222    7  18
( 5514 1r0v_A)  ( 1665 1fzr_A)     0.5713   0.4444   4.5309 (   0    2    6)   0     0.5713   0.4444    7   9
( 5514 1r0v_A)  ( 1808 1gef_A)     0.9995   0.7776   3.3005 (   0   15   21)   0     0.9995   0.7776    7   9
( 5514 1r0v_A)  ( 2210 1hh1_A)     0.9993   0.7776   3.6825 (   0   12   21)   0     0.9993   0.7776    7   9
( 5514 1r0v_A)  ( 2707 1j23_A)     0.5711   0.3999   6.2059 (   0    3    6)   0     0.5711   0.4531    7  10
( 5514 1r0v_A)  ( 3258 1kc6_A)     0.5688   0.2353  10.3046 (   0    4    6)   0     0.5688   0.2353    7  17
( 5514 1r0v_A)  ( 3365 1knv_A)     0.5700   0.2666   8.8059 (   0    1    6)   0     0.7141   0.3333    7  15
( 5514 1r0v_A)  ( 4182 1na6_A)     0.5713   0.3636   4.4755 (   0    2    6)   0     0.5714   0.3636    7  11
( 5514 1r0v_A)  ( 5514 1r0v_A)     1.0000   1.0000   0.0000 (   0   18   21)   0     1.0000   1.0000    7   7
( 5514 1r0v_A)  ( 5516 1r0v_A)     0.9998   0.8749   2.6814 (   0   17   21)   0     0.9998   0.8749    7   8
( 5514 1r0v_A)  ( 5795 1sdo_A)     0.5696   0.2666   9.4184 (   0    3    6)   0     0.5696   0.2666    7  15
( 5514 1r0v_A)  ( 5867 1sx5_A)     0.8549   0.3750   5.9482 (   0   10   15)   0     0.9347   0.4363    7  16
( 5514 1r0v_A)  ( 6324 1vsr_A)     0.5712   0.4999   5.8006 (   0    0    6)   0     0.5712   0.4999    7   8
( 5514 1r0v_A)  ( 6453 2fok_A)     0.5711   0.3333   6.3336 (   0    1    6)   0     0.5711   0.3333    7  12
( 5514 1r0v_A)  ( 6592 3pvi_A)     0.7139   0.6248   4.7828 (   0    5   10)   0     0.7139   0.6248    7   8

-------------------------------------------------------------------------------------------------------------------------