------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 4182 1na6_A) ( 62 1a79_A) 0.3636 0.5711 6.0551 ( 0 2 6) 0 0.3636 0.5713 11 7 ( 4182 1na6_A) ( 222 1avq_A) 0.3632 0.2856 11.3699 ( 0 4 6) 0 0.3632 0.2856 11 14 ( 4182 1na6_A) ( 250 1azo ) 0.3635 0.2857 8.5071 ( 0 4 6) 0 0.3635 0.2857 11 14 ( 4182 1na6_A) ( 336 1bam ) 0.3634 0.2857 9.6500 ( 0 3 6) 0 0.4255 0.3966 11 14 ( 4182 1na6_A) ( 581 1cfr ) 0.3636 0.2500 6.0445 ( 0 1 6) 0 0.5034 0.3675 11 16 ( 4182 1na6_A) ( 621 1ckq_A) 0.3189 0.2287 12.6914 ( 1 4 6) 0 0.3189 0.2287 11 17 ( 4182 1na6_A) ( 717 1d02_A) 0.5451 0.4614 6.4129 ( 0 6 15) 0 0.5452 0.4614 11 13 ( 4182 1na6_A) ( 788 1dc1_A) 0.3636 0.1905 7.6628 ( 0 5 6) 0 0.4544 0.2751 11 21 ( 4182 1na6_A) ( 825 1dfm_A) 0.3633 0.2353 10.4315 ( 0 1 6) 0 0.4545 0.2941 11 17 ( 4182 1na6_A) ( 886 1dmu_A) 0.3521 0.1900 10.3231 ( 1 6 6) 0 0.3990 0.2351 11 21 ( 4182 1na6_A) ( 982 1dzf_A) 0.3635 0.3998 8.8292 ( 0 1 6) 0 0.3635 0.3998 11 10 ( 4182 1na6_A) ( 1276 1ev7_A) 0.3418 0.2201 9.2523 ( 1 5 6) 0 0.3634 0.2403 11 18 ( 4182 1na6_A) ( 1367 1f1z_A) 0.2728 0.2728 6.6636 ( 1 3 6) 0 0.4545 0.4545 11 11 ( 4182 1na6_A) ( 1512 1fiu_A) 0.4470 0.2771 9.0863 ( 1 9 10) 0 0.5828 0.4248 11 18 ( 4182 1na6_A) ( 1665 1fzr_A) 0.3636 0.4444 4.8993 ( 0 1 6) 0 0.4545 0.5555 11 9 ( 4182 1na6_A) ( 1808 1gef_A) 0.3636 0.4444 5.7932 ( 0 2 6) 0 0.3636 0.4444 11 9 ( 4182 1na6_A) ( 2210 1hh1_A) 0.4545 0.5554 5.4338 ( 0 1 10) 0 0.4545 0.5554 11 9 ( 4182 1na6_A) ( 2707 1j23_A) 0.3636 0.4000 5.0561 ( 0 3 6) 0 0.4545 0.4999 11 10 ( 4182 1na6_A) ( 3258 1kc6_A) 0.3188 0.2286 14.1671 ( 1 4 6) 0 0.3188 0.2286 11 17 ( 4182 1na6_A) ( 3365 1knv_A) 0.3636 0.2667 6.2478 ( 0 1 6) 0 0.3636 0.2667 11 15 ( 4182 1na6_A) ( 4182 1na6_A) 1.0000 1.0000 0.0000 ( 0 47 55) 0 1.0000 1.0000 11 11 ( 4182 1na6_A) ( 5514 1r0v_A) 0.3636 0.5713 4.4755 ( 0 2 6) 0 0.3636 0.5714 11 7 ( 4182 1na6_A) ( 5516 1r0v_A) 0.3636 0.4999 5.3893 ( 0 2 6) 0 0.3636 0.5000 11 8 ( 4182 1na6_A) ( 5795 1sdo_A) 0.3631 0.2666 12.0240 ( 0 1 6) 0 0.4538 0.3332 11 15 ( 4182 1na6_A) ( 5867 1sx5_A) 0.3192 0.2413 7.7460 ( 1 4 6) 0 0.3192 0.2413 11 16 ( 4182 1na6_A) ( 6324 1vsr_A) 0.3636 0.4999 5.7916 ( 0 1 6) 0 0.4545 0.6246 11 8 ( 4182 1na6_A) ( 6453 2fok_A) 0.3629 0.3328 13.4180 ( 0 5 6) 0 0.3988 0.3774 11 12 ( 4182 1na6_A) ( 6592 3pvi_A) 0.4232 0.5142 6.8057 ( 1 6 10) 0 0.4232 0.5142 11 8 -------------------------------------------------------------------------------------------------------------------------