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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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(  250 1azo  )  (   62 1a79_A)     0.2857   0.5714   4.2642 (   0    5    6)   0     0.2857   0.5714   14   7
(  250 1azo  )  (  222 1avq_A)     0.3571   0.3571   5.4842 (   0    8   10)   0     0.3966   0.3966   14  14
(  250 1azo  )  (  250 1azo  )     1.0000   1.0000   0.0000 (   0   83   91)   0     1.0000   1.0000   14  14
(  250 1azo  )  (  336 1bam  )     0.2857   0.2857   5.6588 (   0    2    6)   0     0.3473   0.3473   14  14
(  250 1azo  )  (  581 1cfr  )     0.3563   0.3121  14.1144 (   0    8   10)   0     0.3563   0.3121   14  16
(  250 1azo  )  (  621 1ckq_A)     0.2857   0.2353   9.6248 (   0    3    6)   0     0.4230   0.3508   14  17
(  250 1azo  )  (  717 1d02_A)     0.2857   0.3076   8.4579 (   0    3    6)   0     0.3671   0.3743   14  13
(  250 1azo  )  (  788 1dc1_A)     0.2857   0.1905   7.6894 (   0    5    6)   0     0.4044   0.2821   14  21
(  250 1azo  )  (  825 1dfm_A)     0.2857   0.2353   4.2655 (   0    2    6)   0     0.4387   0.3844   14  17
(  250 1azo  )  (  886 1dmu_A)     0.3284   0.2336   8.4620 (   2    9   10)   0     0.4331   0.3688   14  21
(  250 1azo  )  (  982 1dzf_A)     0.2857   0.3998   8.8413 (   0    3    6)   0     0.3570   0.4995   14  10
(  250 1azo  )  ( 1276 1ev7_A)     0.4268   0.3328   5.4439 (   1   12   15)   0     0.4268   0.3328   14  18
(  250 1azo  )  ( 1367 1f1z_A)     0.2857   0.3636   6.8726 (   0    1    6)   0     0.3513   0.4362   14  11
(  250 1azo  )  ( 1512 1fiu_A)     0.2857   0.2222   4.7368 (   0    5    6)   0     0.3975   0.3651   14  18
(  250 1azo  )  ( 1665 1fzr_A)     0.2857   0.4441   8.7114 (   0    1    6)   0     0.2857   0.4441   14   9
(  250 1azo  )  ( 1808 1gef_A)     0.3571   0.5553   6.2381 (   0    7   10)   0     0.3571   0.5553   14   9
(  250 1azo  )  ( 2210 1hh1_A)     0.2857   0.4443   6.5788 (   0    1    6)   0     0.4201   0.6037   14   9
(  250 1azo  )  ( 2707 1j23_A)     0.2855   0.3991  12.4473 (   0    4    6)   0     0.3158   0.3991   14  10
(  250 1azo  )  ( 3258 1kc6_A)     0.2857   0.2353   6.6979 (   0    5    6)   0     0.6486   0.5601   14  17
(  250 1azo  )  ( 3365 1knv_A)     0.2857   0.2667   7.2922 (   0    4    6)   0     0.3118   0.3082   14  15
(  250 1azo  )  ( 4182 1na6_A)     0.2857   0.3635   8.5071 (   0    4    6)   0     0.2857   0.3635   14  11
(  250 1azo  )  ( 5514 1r0v_A)     0.2857   0.5714   3.3302 (   0    4    6)   0     0.3571   0.7141   14   7
(  250 1azo  )  ( 5516 1r0v_A)     0.2857   0.4999   4.5377 (   0    5    6)   0     0.2857   0.4999   14   8
(  250 1azo  )  ( 5795 1sdo_A)     0.2857   0.2666   8.7715 (   0    4    6)   0     0.3633   0.3587   14  15
(  250 1azo  )  ( 5867 1sx5_A)     0.2972   0.2763   6.3935 (   2    7   10)   0     0.5711   0.4998   14  16
(  250 1azo  )  ( 6324 1vsr_A)     0.2857   0.4990   9.6747 (   0    2    6)   0     0.3192   0.4990   14   8
(  250 1azo  )  ( 6453 2fok_A)     0.3535   0.4089  10.0383 (   1    8   10)   0     0.3535   0.4089   14  12
(  250 1azo  )  ( 6592 3pvi_A)     0.4999   0.8739   4.8792 (   0   13   21)   0     0.4999   0.8739   14   8

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