------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 1276 1ev7_A) ( 62 1a79_A) 0.3186 0.4864 5.0056 ( 2 10 15) 0 0.3186 0.7140 18 7 ( 1276 1ev7_A) ( 222 1avq_A) 0.3186 0.3847 4.3533 ( 2 10 15) 0 0.3186 0.3847 18 14 ( 1276 1ev7_A) ( 250 1azo ) 0.3328 0.4268 5.4439 ( 1 12 15) 0 0.3328 0.4268 18 14 ( 1276 1ev7_A) ( 336 1bam ) 0.2222 0.2857 9.3444 ( 0 1 6) 0 0.2222 0.2857 18 14 ( 1276 1ev7_A) ( 581 1cfr ) 0.3020 0.3249 9.9375 ( 3 12 15) 0 0.3020 0.3249 18 16 ( 1276 1ev7_A) ( 621 1ckq_A) 0.2222 0.2353 8.0512 ( 0 1 6) 0 0.2942 0.2993 18 17 ( 1276 1ev7_A) ( 717 1d02_A) 0.2222 0.3077 7.9481 ( 0 2 6) 0 0.2777 0.3844 18 13 ( 1276 1ev7_A) ( 788 1dc1_A) 0.2685 0.2336 6.4448 ( 2 9 10) 0 0.3186 0.2786 18 21 ( 1276 1ev7_A) ( 825 1dfm_A) 0.2644 0.2701 6.7787 ( 3 9 15) 0 0.4438 0.4698 18 17 ( 1276 1ev7_A) ( 886 1dmu_A) 0.3889 0.3333 5.6931 ( 0 14 21) 0 0.3889 0.3333 18 21 ( 1276 1ev7_A) ( 982 1dzf_A) 0.2222 0.3999 7.0960 ( 0 2 6) 0 0.2334 0.3999 18 10 ( 1276 1ev7_A) ( 1276 1ev7_A) 1.0000 1.0000 0.0000 ( 0 136 153) 0 1.0000 1.0000 18 18 ( 1276 1ev7_A) ( 1367 1f1z_A) 0.2222 0.3636 6.6008 ( 0 3 6) 0 0.2222 0.3636 18 11 ( 1276 1ev7_A) ( 1512 1fiu_A) 0.2222 0.2222 7.1692 ( 0 2 6) 0 0.2222 0.2222 18 18 ( 1276 1ev7_A) ( 1665 1fzr_A) 0.2217 0.4283 22.7636 ( 0 6 6) 0 0.2217 0.4283 18 9 ( 1276 1ev7_A) ( 1808 1gef_A) 0.3186 0.4668 4.2270 ( 2 10 15) 0 0.3186 0.4668 18 9 ( 1276 1ev7_A) ( 2210 1hh1_A) 0.3292 0.5736 4.6900 ( 1 7 15) 0 0.3292 0.5736 18 9 ( 1276 1ev7_A) ( 2707 1j23_A) 0.2222 0.3998 7.9584 ( 0 5 6) 0 0.3186 0.4531 18 10 ( 1276 1ev7_A) ( 3258 1kc6_A) 0.2222 0.2353 7.3636 ( 0 5 6) 0 0.2644 0.2700 18 17 ( 1276 1ev7_A) ( 3365 1knv_A) 0.2222 0.2666 11.1977 ( 0 5 6) 0 0.2499 0.2666 18 15 ( 1276 1ev7_A) ( 4182 1na6_A) 0.2201 0.3418 9.0314 ( 1 5 6) 0 0.2403 0.3634 18 11 ( 1276 1ev7_A) ( 5514 1r0v_A) 0.3186 0.4864 5.2799 ( 2 10 15) 0 0.3186 0.4864 18 7 ( 1276 1ev7_A) ( 5516 1r0v_A) 0.2778 0.6249 4.2316 ( 0 7 10) 0 0.2778 0.6249 18 8 ( 1276 1ev7_A) ( 5795 1sdo_A) 0.2222 0.2666 7.9089 ( 0 3 6) 0 0.3308 0.3939 18 15 ( 1276 1ev7_A) ( 5867 1sx5_A) 0.2222 0.2500 5.9890 ( 0 5 6) 0 0.3597 0.3897 18 16 ( 1276 1ev7_A) ( 6324 1vsr_A) 0.2200 0.4178 15.2229 ( 1 5 6) 0 0.2204 0.4178 18 8 ( 1276 1ev7_A) ( 6453 2fok_A) 0.2222 0.3333 6.9923 ( 0 1 6) 0 0.2222 0.3333 18 12 ( 1276 1ev7_A) ( 6592 3pvi_A) 0.3874 0.8031 5.6176 ( 1 11 21) 0 0.3874 0.8031 18 8 -------------------------------------------------------------------------------------------------------------------------