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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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(  665 1crz_A)  (  203 1ati_A)     0.9958   0.8865   5.7887 (   0   13   28)   0     0.9958   0.8865    8   9
(  665 1crz_A)  (  665 1crz_A)     1.0000   1.0000   0.0000 (   0   20   28)   0     1.0000   1.0000    8   8
(  665 1crz_A)  ( 1129 1eex_B)     0.9601   0.7185   6.3153 (   1   16   28)   0     0.9929   0.7258    8  11
(  665 1crz_A)  ( 1296 1ex2_A)     0.4999   0.3077   5.9395 (   0    3    6)   0     0.8680   0.5378    8  13
(  665 1crz_A)  ( 1734 1g5h_A)     0.9858   0.8809   7.8846 (   0   13   28)   0     0.9858   0.8809    8   9
(  665 1crz_A)  ( 2082 1h4v_B)     0.9962   0.8868   5.6456 (   0   15   28)   0     0.9962   0.8868    8   9
(  665 1crz_A)  ( 2167 1hc7_A)     0.9786   0.8768   8.7734 (   0   14   28)   0     0.9786   0.8768    8   9
(  665 1crz_A)  ( 2290 1htt_A)     0.9959   0.8866   5.7335 (   0   15   28)   0     0.9959   0.8866    8   9
(  665 1crz_A)  ( 3201 1k7k_A)     0.9978   0.6664   4.9144 (   0   15   28)   0     0.9978   0.6664    8  12
(  665 1crz_A)  ( 4194 1nbw_B)     0.9662   0.9662   6.5389 (   1   17   28)   0     0.9662   0.9662    8   8
(  665 1crz_A)  ( 4275 1nj8_A)     0.9808   0.8781   8.5235 (   0   14   28)   0     0.9808   0.8781    8   9
(  665 1crz_A)  ( 5300 1qe0_A)     0.9962   0.8868   5.6305 (   0   12   28)   0     0.9962   0.8868    8   9
(  665 1crz_A)  ( 5307 1qf6_A)     0.9927   0.8848   6.6359 (   0   12   28)   0     0.9927   0.8848    8   9
(  665 1crz_A)  ( 6192 1v7r_A)     0.9969   0.6151   5.3567 (   0   17   28)   0     0.9969   0.6151    8  13

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