------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 2167 1hc7_A) ( 203 1ati_A) 0.8917 0.8917 5.0807 ( 2 23 36) 0 0.8917 0.8917 9 9 ( 2167 1hc7_A) ( 665 1crz_A) 0.8768 0.9786 8.7734 ( 0 14 28) 0 0.8768 0.9786 9 8 ( 2167 1hc7_A) ( 1129 1eex_B) 0.8838 0.7254 7.0143 ( 0 12 28) 0 0.8838 0.7254 9 11 ( 2167 1hc7_A) ( 1296 1ex2_A) 0.4434 0.3075 11.2070 ( 0 3 6) 0 0.4434 0.3075 9 13 ( 2167 1hc7_A) ( 1734 1g5h_A) 0.8776 0.8776 3.5736 ( 2 22 36) 0 0.8776 0.8776 9 9 ( 2167 1hc7_A) ( 2082 1h4v_B) 0.9896 0.9896 5.3481 ( 1 24 36) 0 0.9896 0.9896 9 9 ( 2167 1hc7_A) ( 2167 1hc7_A) 1.0000 1.0000 0.0000 ( 0 26 36) 0 1.0000 1.0000 9 9 ( 2167 1hc7_A) ( 2290 1htt_A) 0.9915 0.9915 4.9490 ( 1 25 36) 0 0.9915 0.9915 9 9 ( 2167 1hc7_A) ( 3201 1k7k_A) 0.4434 0.3331 11.2834 ( 0 4 6) 0 0.4434 0.3331 9 12 ( 2167 1hc7_A) ( 4194 1nbw_B) 0.8843 0.9918 6.8443 ( 0 14 28) 0 0.8843 0.9918 9 8 ( 2167 1hc7_A) ( 4275 1nj8_A) 0.9999 0.9999 1.6869 ( 0 26 36) 0 0.9999 0.9999 9 9 ( 2167 1hc7_A) ( 5300 1qe0_A) 0.8742 0.8742 6.5932 ( 2 22 36) 0 0.8742 0.8742 9 9 ( 2167 1hc7_A) ( 5307 1qf6_A) 0.6371 0.6371 4.8315 ( 3 20 36) 0 0.6371 0.6371 9 9 ( 2167 1hc7_A) ( 6192 1v7r_A) 0.8776 0.6135 8.6235 ( 0 14 28) 0 0.8776 0.6135 9 13 -------------------------------------------------------------------------------------------------------------------------