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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 1734 1g5h_A)  (  203 1ati_A)     0.8761   0.8761   1.1412 (   1   18   28)   0     0.8761   0.8761    9   9
( 1734 1g5h_A)  (  665 1crz_A)     0.8809   0.9858   7.8846 (   0   13   28)   0     0.8809   0.9858    9   8
( 1734 1g5h_A)  ( 1129 1eex_B)     0.8859   0.7262   6.1358 (   0   11   28)   0     0.8859   0.7262    9  11
( 1734 1g5h_A)  ( 1296 1ex2_A)     0.3520   0.2852  13.1524 (   1    4    6)   0     0.3520   0.2852    9  13
( 1734 1g5h_A)  ( 1734 1g5h_A)     1.0000   1.0000   0.0000 (   0   25   36)   0     1.0000   1.0000    9   9
( 1734 1g5h_A)  ( 2082 1h4v_B)     0.9882   0.9882   4.4060 (   1   22   36)   0     0.9882   0.9882    9   9
( 1734 1g5h_A)  ( 2167 1hc7_A)     0.8776   0.8776   3.5736 (   2   22   36)   0     0.8776   0.8776    9   9
( 1734 1g5h_A)  ( 2290 1htt_A)     0.9899   0.9899   4.3837 (   1   23   36)   0     0.9899   0.9899    9   9
( 1734 1g5h_A)  ( 3201 1k7k_A)     0.8782   0.6641   8.5015 (   0   12   28)   0     0.8782   0.6641    9  12
( 1734 1g5h_A)  ( 4194 1nbw_B)     0.8863   0.9954   5.9127 (   0   13   28)   0     0.8863   0.9954    9   8
( 1734 1g5h_A)  ( 4275 1nj8_A)     0.8778   0.8778   3.0957 (   2   22   36)   0     0.8778   0.8778    9   9
( 1734 1g5h_A)  ( 5300 1qe0_A)     0.9970   0.9970   5.2850 (   0   22   36)   0     0.9970   0.9970    9   9
( 1734 1g5h_A)  ( 5307 1qf6_A)     0.8559   0.8559   3.0451 (   1   14   28)   0     0.8559   0.8559    9   9
( 1734 1g5h_A)  ( 6192 1v7r_A)     0.8822   0.6143   7.5300 (   0   11   28)   0     0.8822   0.6143    9  13

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