------------------------------------------------------------------------------------------------------------------------- Will print the top 5 alignments (based on backbone shifts) for each pairing of chains, as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: score1 [score2] pairings L2ERR {Xbad/Xsig:Xtot} Breaks (score2 is the score from protein2's perspective, not the minimum of the two perspectives as in some earlier printouts.) Recall that "SIMILARITY" refers to similarities over all alignments not just the top ones. ------------------------------------------------------------------------------------------------------------------------- [3732, 71]: Comparing 1lu4_A and 1a8l, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 17 (9 H + 8 S) secondary structure elements in 1a8l, of which 8 satisfy the size requirements. 1.71433 [ 1.14300] ((5 . 2) (6 . 3) (7 . 4) (10 . 5) (11 . 6) (12 . 7) (13 . 8)) 2.739 {0/11:21} B:0 2.00003 [ 1.33345] ((5 . 2) (6 . 3) (10 . 5) (11 . 6) (12 . 7) (13 . 8)) 2.887 {0/8:15} B:0 2.00009 [ 1.33365] ((5 . 2) (9 . 4) (10 . 5) (11 . 6) (12 . 7) (13 . 8)) 3.735 {0/9:15} B:0 2.00012 [ 1.33373] ((7 . 2) (9 . 4) (10 . 5) (11 . 6) (12 . 7) (13 . 8)) 3.966 {0/10:15} B:0 2.40017 [ 1.60056] ((7 . 2) (8 . 3) (9 . 4) (10 . 5) (13 . 8)) 4.945 {0/7:10} B:0 SIMILARITY (1/min{score1}): 0.5833 [and 1/min{score2}: 0.8749] [3732, 72]: Comparing 1lu4_A and 1a8l, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 17 (9 H + 8 S) secondary structure elements in 1a8l, of which 8 satisfy the size requirements. 1.71432 [ 1.14296] ((5 . 10) (6 . 11) (7 . 12) (10 . 14) (11 . 15) (12 . 16) (13 . 17)) 2.509 {0/11:21} B:0 2.00006 [ 1.33353] ((7 . 10) (9 . 12) (10 . 14) (11 . 15) (12 . 16) (13 . 17)) 3.331 {0/10:15} B:0 2.40013 [ 1.60044] ((5 . 10) (6 . 11) (7 . 12) (11 . 16) (13 . 17)) 4.671 {0/3:10} B:0 2.40026 [ 1.60088] ((7 . 10) (8 . 11) (9 . 12) (10 . 14) (13 . 17)) 5.545 {0/7:10} B:0 3.00130 [ 2.00438] ((6 . 9) (8 . 11) (11 . 12) (12 . 15)) 9.795 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.5833 [and 1/min{score2}: 0.8749] [3732, 78]: Comparing 1lu4_A and 1a8y, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 28 (13 H + 15 S) secondary structure elements in 1a8y, of which 8 satisfy the size requirements. 1.50889 [ 1.02899] ((4 . 2) (5 . 3) (6 . 4) (7 . 5) (10 . 6) (11 . 7) (12 . 8) (13 . 9)) 3.082 {1/17:28} B:0 2.00009 [ 1.33363] ((7 . 3) (9 . 5) (10 . 6) (11 . 7) (12 . 8) (13 . 9)) 3.674 {0/10:15} B:0 2.52894 [ 1.94391] ((4 . 2) (5 . 3) (6 . 4) (9 . 5) (13 . 9)) 5.001 {1/6:10} B:0 3.06906 [ 2.20688] ((3 . 5) (4 . 6) (7 . 8) (8 . 9)) 4.029 {1/6:6} B:0 3.31172 [ 2.72681] ((6 . 2) (7 . 3) (8 . 4) (13 . 9)) 11.007 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.6627 [and 1/min{score2}: 0.9718] [3732, 79]: Comparing 1lu4_A and 1a8y, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 28 (13 H + 15 S) secondary structure elements in 1a8y, of which 9 satisfy the size requirements. 2.52990 [ 2.06787] ((6 . 11) (7 . 12) (10 . 15) (11 . 16) (12 . 17)) 8.268 {1/6:10} B:0 3.06906 [ 2.40308] ((3 . 14) (4 . 15) (7 . 17) (8 . 18)) 3.907 {1/6:6} B:0 3.78139 [ 3.49430] ((5 . 10) (6 . 11) (7 . 14) (8 . 15)) 3.505 {1/3:6} B:0 3.78207 [ 3.49516] ((7 . 10) (8 . 11) (10 . 13) (13 . 15)) 9.932 {2/6:6} B:0 5.15473 [ 5.05055] ((4 . 13) (5 . 14) (6 . 15) (9 . 17)) 6.839 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.7238 [and 1/min{score2}: 0.9061] [3732, 80]: Comparing 1lu4_A and 1a8y, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 28 (13 H + 15 S) secondary structure elements in 1a8y, of which 9 satisfy the size requirements. 2.40003 [ 1.80008] ((7 . 21) (10 . 25) (11 . 26) (12 . 27) (13 . 28)) 3.312 {0/6:10} B:0 2.44308 [ 1.89682] ((7 . 21) (8 . 22) (9 . 23) (10 . 25) (13 . 28)) 4.440 {1/8:10} B:0 3.06907 [ 2.40311] ((3 . 23) (4 . 25) (7 . 27) (8 . 28)) 4.252 {1/6:6} B:0 5.15507 [ 5.05091] ((4 . 22) (5 . 23) (6 . 25) (8 . 28)) 10.931 {2/4:6} B:0 6.09190 [ 6.02973] ((4 . 22) (6 . 25) (7 . 27) (8 . 28)) 11.300 {3/5:6} B:0 SIMILARITY (1/min{score1}): 0.6241 [and 1/min{score2}: 0.7517] [3732, 96]: Comparing 1lu4_A and 1aba, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 7 (3 H + 4 S) secondary structure elements in 1aba, of which 7 satisfy the size requirements. 1.71436 [ 1.00036] ((5 . 1) (6 . 2) (7 . 3) (10 . 4) (11 . 5) (12 . 6) (13 . 7)) 3.127 {0/8:21} B:0 2.00001 [ 1.16674] ((5 . 1) (6 . 2) (7 . 3) (10 . 4) (11 . 5) (12 . 6)) 2.335 {0/7:15} B:0 3.00002 [ 1.75012] ((7 . 1) (8 . 2) (9 . 3) (10 . 4)) 3.638 {0/3:6} B:0 3.00004 [ 1.75019] ((7 . 1) (9 . 3) (10 . 4) (13 . 7)) 4.050 {0/3:6} B:0 5.15471 [ 5.01870] ((4 . 2) (5 . 3) (6 . 4) (9 . 6)) 6.198 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.5833 [and 1/min{score2}: 0.9996] [3732, 136]: Comparing 1lu4_A and 1aiu, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 9 (4 H + 5 S) secondary structure elements in 1aiu, of which 8 satisfy the size requirements. 1.51446 [ 1.04621] ((4 . 2) (5 . 3) (6 . 4) (7 . 5) (10 . 6) (11 . 7) (12 . 8) (13 . 9)) 2.428 {1/15:28} B:0 2.40002 [ 1.60008] ((7 . 3) (10 . 6) (11 . 7) (12 . 8) (13 . 9)) 3.067 {0/5:10} B:0 2.40007 [ 1.60025] ((7 . 3) (9 . 5) (10 . 6) (11 . 7) (13 . 9)) 4.054 {0/6:10} B:0 3.00013 [ 2.00043] ((5 . 3) (8 . 4) (10 . 6) (13 . 9)) 5.495 {0/4:6} B:0 3.31223 [ 2.72772] ((8 . 2) (9 . 3) (10 . 4) (13 . 6)) 11.820 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.6603 [and 1/min{score2}: 0.9558] [3732, 361]: Comparing 1lu4_A and 1bed, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 13 (8 H + 5 S) secondary structure elements in 1bed, of which 12 satisfy the size requirements. 1.50962 [ 1.50962] ((5 . 2) (6 . 3) (7 . 4) (8 . 5) (10 . 9) (11 . 10) (12 . 11) (13 . 13)) 5.234 {1/17:28} B:0 1.71436 [ 1.71436] ((5 . 2) (6 . 3) (7 . 4) (10 . 9) (11 . 10) (12 . 11) (13 . 13)) 3.162 {0/11:21} B:0 2.57740 [ 2.57740] ((5 . 2) (6 . 3) (7 . 4) (8 . 6) (10 . 9) (11 . 10) (12 . 11) (13 . 13)) 4.086 {4/16:28} B:0 3.00109 [ 3.00109] ((6 . 5) (8 . 7) (10 . 9) (13 . 13)) 9.372 {0/5:6} B:0 3.31092 [ 3.31092] ((4 . 3) (5 . 4) (8 . 6) (13 . 9)) 9.168 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.6624 [and 1/min{score2}: 0.6624] [3732, 941]: Comparing 1lu4_A and 1dug_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 12 (8 H + 4 S) secondary structure elements in 1dug_A, of which 7 satisfy the size requirements. 2.03078 [ 1.30052] ((7 . 1) (8 . 2) (9 . 3) (10 . 4) (11 . 5) (12 . 6)) 4.793 {1/10:15} B:0 3.00082 [ 1.75412] ((5 . 1) (6 . 2) (7 . 3) (10 . 7)) 8.730 {0/0:6} B:0 3.13837 [ 2.24472] ((3 . 3) (4 . 4) (7 . 6) (8 . 7)) 5.076 {1/5:6} B:0 3.31042 [ 2.63866] ((7 . 1) (8 . 2) (10 . 4) (13 . 7)) 6.932 {1/4:6} B:0 5.15473 [ 5.01871] ((4 . 2) (5 . 3) (6 . 4) (9 . 6)) 6.576 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.4924 [and 1/min{score2}: 0.7689] [3732, 1048]: Comparing 1lu4_A and 1e6b_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 14 (10 H + 4 S) secondary structure elements in 1e6b_A, of which 8 satisfy the size requirements. 2.00028 [ 1.33429] ((7 . 1) (8 . 2) (9 . 3) (10 . 5) (11 . 6) (12 . 7)) 4.933 {0/10:15} B:0 2.40136 [ 1.60459] ((5 . 1) (6 . 2) (7 . 3) (9 . 7) (10 . 8)) 8.386 {0/3:10} B:0 3.00001 [ 2.00003] ((5 . 1) (6 . 2) (7 . 3) (10 . 5)) 2.911 {0/3:6} B:0 3.00031 [ 2.00103] ((7 . 1) (8 . 2) (10 . 4) (13 . 8)) 6.825 {0/3:6} B:0 3.00138 [ 2.00463] ((3 . 1) (6 . 2) (9 . 7) (10 . 8)) 9.937 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.4999 [and 1/min{score2}: 0.7495] [3732, 1122]: Comparing 1lu4_A and 1eej_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 20 (9 H + 11 S) secondary structure elements in 1eej_A, of which 12 satisfy the size requirements. 3.00231 [ 3.00231] ((4 . 13) (6 . 16) (8 . 17) (10 . 20)) 11.309 {0/6:6} B:0 3.16132 [ 3.16132] ((4 . 12) (10 . 17) (11 . 18) (12 . 19) (13 . 20)) 7.997 {2/7:10} B:0 3.78279 [ 3.78279] ((2 . 14) (6 . 16) (8 . 17) (10 . 20)) 11.884 {2/6:6} B:0 4.28471 [ 4.28471] ((2 . 11) (4 . 13) (6 . 15) (8 . 17)) 7.295 {2/5:6} B:0 5.15472 [ 5.15472] ((6 . 13) (8 . 16) (10 . 17) (13 . 20)) 6.250 {3/6:6} B:0 SIMILARITY (1/min{score1}): 0.4090 [and 1/min{score2}: 0.4090] [3732, 1123]: Comparing 1lu4_A and 1eem_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 16 (12 H + 4 S) secondary structure elements in 1eem_A, of which 7 satisfy the size requirements. 2.40020 [ 1.40100] ((7 . 1) (8 . 2) (10 . 4) (11 . 5) (12 . 6)) 5.184 {0/7:10} B:0 3.00029 [ 1.75145] ((7 . 1) (8 . 2) (10 . 4) (13 . 7)) 6.720 {0/3:6} B:0 3.00056 [ 1.75283] ((5 . 1) (6 . 2) (7 . 3) (10 . 7)) 7.947 {0/0:6} B:0 5.15472 [ 5.01871] ((4 . 2) (5 . 3) (6 . 4) (9 . 6)) 6.544 {2/4:6} B:0 5.15495 [ 5.01895] ((4 . 2) (5 . 3) (6 . 4) (8 . 7)) 9.967 {1/2:6} B:0 SIMILARITY (1/min{score1}): 0.4166 [and 1/min{score2}: 0.7138] [3732, 1150]: Comparing 1lu4_A and 1ego, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 8 (4 H + 4 S) secondary structure elements in 1ego, of which 8 satisfy the size requirements. 2.00003 [ 1.33345] ((5 . 1) (6 . 2) (7 . 3) (11 . 6) (12 . 7) (13 . 8)) 2.904 {0/2:15} B:0 2.00005 [ 1.33349] ((5 . 1) (6 . 2) (7 . 3) (10 . 5) (11 . 6) (12 . 7)) 3.146 {0/5:15} B:0 2.40000 [ 1.60001] ((5 . 1) (6 . 2) (7 . 3) (11 . 6) (12 . 7)) 2.000 {0/2:10} B:0 3.00002 [ 2.00007] ((7 . 1) (10 . 5) (11 . 6) (12 . 7)) 3.475 {0/3:6} B:0 3.00019 [ 2.00063] ((5 . 1) (6 . 2) (7 . 3) (11 . 7)) 6.038 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.5000 [and 1/min{score2}: 0.7499] [3732, 1448]: Comparing 1lu4_A and 1f9m_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 9 (4 H + 5 S) secondary structure elements in 1f9m_A, of which 9 satisfy the size requirements. 2.40002 [ 1.80005] ((7 . 3) (10 . 6) (11 . 7) (12 . 8) (13 . 9)) 3.004 {0/5:10} B:0 2.40016 [ 1.80039] ((7 . 3) (8 . 4) (9 . 5) (10 . 6) (13 . 9)) 4.938 {0/6:10} B:0 2.91541 [ 2.65332] ((4 . 2) (5 . 3) (6 . 4) (9 . 5) (13 . 9)) 3.853 {1/4:10} B:0 3.78178 [ 3.49479] ((7 . 1) (10 . 4) (11 . 5) (13 . 6)) 8.666 {1/3:6} B:0 3.78219 [ 3.49532] ((7 . 1) (8 . 2) (10 . 4) (13 . 6)) 10.358 {2/6:6} B:0 SIMILARITY (1/min{score1}): 0.7142 [and 1/min{score2}: 0.8778] [3732, 1588]: Comparing 1lu4_A and 1fo5_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 6 (2 H + 4 S) secondary structure elements in 1fo5_A, of which 6 satisfy the size requirements. 3.00007 [ 1.50059] ((7 . 1) (8 . 2) (9 . 3) (12 . 5)) 4.790 {0/2:6} B:0 3.00009 [ 1.50075] ((7 . 1) (8 . 2) (9 . 3) (11 . 4)) 5.078 {0/0:6} B:0 3.00015 [ 1.50116] ((5 . 1) (6 . 2) (7 . 3) (11 . 5)) 5.665 {0/0:6} B:0 3.00025 [ 1.50203] ((7 . 1) (8 . 2) (9 . 3) (13 . 6)) 6.515 {0/0:6} B:0 3.00066 [ 1.50528] ((5 . 1) (6 . 2) (7 . 3) (10 . 6)) 8.279 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.4166 [and 1/min{score2}: 0.8326] [3732, 1639]: Comparing 1lu4_A and 1fvk_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 14 (9 H + 5 S) secondary structure elements in 1fvk_A, of which 13 satisfy the size requirements. 1.71455 [ 1.85735] ((5 . 2) (6 . 4) (7 . 5) (10 . 10) (11 . 11) (12 . 12) (13 . 14)) 4.317 {0/11:21} B:0 2.83515 [ 2.85588] ((5 . 2) (6 . 4) (7 . 5) (8 . 7) (10 . 10) (11 . 11) (12 . 12) (13 . 14)) 5.157 {5/18:28} B:0 3.00060 [ 3.25047] ((9 . 2) (10 . 3) (12 . 5) (13 . 6)) 8.064 {0/3:6} B:0 3.78175 [ 3.91574] ((7 . 2) (8 . 4) (9 . 5) (13 . 7)) 8.482 {1/3:6} B:0 5.15471 [ 5.20962] ((5 . 2) (6 . 3) (7 . 5) (8 . 6)) 6.085 {1/2:6} B:0 SIMILARITY (1/min{score1}): 0.5832 [and 1/min{score2}: 0.5384] [3732, 1752]: Comparing 1lu4_A and 1g7e_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 8 (4 H + 4 S) secondary structure elements in 1g7e_A, of which 8 satisfy the size requirements. 1.50888 [ 1.02895] ((4 . 1) (5 . 2) (6 . 3) (7 . 4) (10 . 5) (11 . 6) (12 . 7) (13 . 8)) 2.983 {1/17:28} B:0 1.71433 [ 1.14299] ((5 . 2) (6 . 3) (7 . 4) (10 . 5) (11 . 6) (12 . 7) (13 . 8)) 2.685 {0/11:21} B:0 1.76195 [ 1.28272] ((4 . 1) (5 . 2) (6 . 3) (7 . 4) (11 . 6) (12 . 7) (13 . 8)) 3.020 {1/10:21} B:0 2.44386 [ 1.73426] ((6 . 1) (7 . 2) (10 . 5) (12 . 7) (13 . 8)) 7.603 {1/8:10} B:0 4.28490 [ 4.06148] ((4 . 3) (5 . 4) (6 . 5) (8 . 8)) 9.098 {2/5:6} B:0 SIMILARITY (1/min{score1}): 0.6627 [and 1/min{score2}: 0.9719] [3732, 1753]: Comparing 1lu4_A and 1g7o_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 15 (11 H + 4 S) secondary structure elements in 1g7o_A, of which 7 satisfy the size requirements. 3.00025 [ 1.75127] ((7 . 1) (8 . 2) (10 . 4) (13 . 7)) 6.502 {0/3:6} B:0 5.15476 [ 5.01874] ((4 . 2) (5 . 3) (6 . 4) (9 . 6)) 7.422 {2/4:6} B:0 5.15476 [ 5.01875] ((6 . 2) (8 . 4) (9 . 6) (10 . 7)) 7.464 {2/4:6} B:0 5.15505 [ 5.01906] ((4 . 2) (5 . 3) (6 . 4) (8 . 7)) 10.781 {1/2:6} B:0 5.15509 [ 5.01911] ((4 . 2) (6 . 4) (7 . 6) (8 . 7)) 11.068 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.5833 [and 1/min{score2}: 0.9992] [3732, 1867]: Comparing 1lu4_A and 1glq_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 15 (11 H + 4 S) secondary structure elements in 1glq_A, of which 7 satisfy the size requirements. 1.82455 [ 1.36245] ((5 . 1) (6 . 2) (7 . 3) (10 . 4) (11 . 6) (12 . 7) (13 . 8)) 4.105 {1/8:21} B:0 2.00004 [ 1.16686] ((5 . 1) (6 . 2) (7 . 3) (11 . 6) (12 . 7) (13 . 8)) 3.014 {0/2:15} B:0 2.11915 [ 1.56638] ((5 . 1) (6 . 2) (7 . 3) (10 . 4) (11 . 6) (12 . 7)) 3.493 {1/7:15} B:0 2.52887 [ 1.84400] ((7 . 1) (9 . 3) (10 . 4) (11 . 6) (12 . 7)) 4.174 {1/6:10} B:0 3.00068 [ 1.75340] ((5 . 1) (6 . 2) (7 . 3) (10 . 8)) 8.317 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.5600 [and 1/min{score2}: 0.8570] [3732, 1882]: Comparing 1lu4_A and 1gnw_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 17 (13 H + 4 S) secondary structure elements in 1gnw_A, of which 8 satisfy the size requirements. 1.71439 [ 1.14322] ((5 . 1) (6 . 2) (9 . 3) (10 . 5) (11 . 6) (12 . 7) (13 . 8)) 3.443 {0/9:21} B:0 2.00003 [ 1.33343] ((5 . 1) (6 . 2) (9 . 3) (10 . 5) (11 . 6) (12 . 7)) 2.789 {0/8:15} B:0 2.40002 [ 1.60007] ((7 . 1) (9 . 3) (10 . 5) (11 . 6) (12 . 7)) 2.935 {0/7:10} B:0 2.40007 [ 1.60023] ((5 . 1) (6 . 2) (7 . 3) (10 . 5) (13 . 8)) 3.968 {0/4:10} B:0 3.00030 [ 2.00102] ((7 . 1) (8 . 2) (10 . 4) (13 . 8)) 6.807 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.5833 [and 1/min{score2}: 0.8747] [3732, 1893]: Comparing 1lu4_A and 1gp1_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 14 (7 H + 7 S) secondary structure elements in 1gp1_A, of which 9 satisfy the size requirements. 1.60399 [ 1.45312] ((4 . 4) (5 . 5) (6 . 6) (7 . 7) (8 . 8) (10 . 10) (11 . 12) (12 . 13) (13 . 14)) 2.822 {3/22:36} B:0 1.74292 [ 1.54968] ((4 . 4) (5 . 5) (6 . 6) (7 . 7) (10 . 10) (11 . 12) (12 . 13) (13 . 14)) 2.409 {2/14:28} B:0 3.00130 [ 2.25308] ((4 . 8) (6 . 10) (9 . 12) (10 . 14)) 9.797 {0/5:6} B:0 3.13930 [ 2.54199] ((2 . 7) (4 . 8) (6 . 10) (11 . 13)) 9.506 {1/5:6} B:0 3.13943 [ 2.54224] ((4 . 6) (5 . 7) (10 . 10) (13 . 14)) 9.808 {1/5:6} B:0 SIMILARITY (1/min{score1}): 0.6234 [and 1/min{score2}: 0.6882] [3732, 2120]: Comparing 1lu4_A and 1h75_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 7 (3 H + 4 S) secondary structure elements in 1h75_A, of which 7 satisfy the size requirements. 2.00023 [ 1.16780] ((7 . 1) (8 . 2) (9 . 3) (10 . 4) (11 . 5) (12 . 6)) 4.662 {0/9:15} B:0 3.00013 [ 1.75065] ((7 . 1) (8 . 2) (10 . 4) (13 . 7)) 5.492 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.4999 [and 1/min{score2}: 0.8563] [3732, 2177]: Comparing 1lu4_A and 1hd2_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 15 (8 H + 7 S) secondary structure elements in 1hd2_A, of which 15 satisfy the size requirements. 1.18932 [ 1.36209] ((2 . 1) (3 . 2) (4 . 3) (5 . 4) (6 . 6) (7 . 8) (8 . 9) (9 . 10) (10 . 11) (11 . 13) (12 . 14) (13 . 15)) 2.638 {5/50:66} B:0 1.20184 [ 1.37049] ((2 . 1) (3 . 2) (4 . 3) (5 . 4) (6 . 5) (7 . 8) (8 . 9) (9 . 10) (10 . 11) (11 . 13) (12 . 14) (13 . 15)) 3.457 {5/49:66} B:0 2.91568 [ 3.31039] ((4 . 6) (5 . 8) (11 . 13) (12 . 14) (13 . 15)) 6.689 {1/4:10} B:0 2.91632 [ 3.31082] ((4 . 5) (5 . 8) (7 . 10) (11 . 13) (13 . 15)) 8.840 {1/4:10} B:0 3.00018 [ 3.75009] ((5 . 8) (6 . 9) (7 . 10) (13 . 15)) 5.977 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.8850 [and 1/min{score2}: 0.7554] [3732, 2339]: Comparing 1lu4_A and 1hyu_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 42 (16 H + 26 S) secondary structure elements in 1hyu_A, of which 7 satisfy the size requirements. 2.00007 [ 1.16701] ((5 . 2) (6 . 3) (7 . 4) (11 . 5) (12 . 6) (13 . 7)) 3.454 {0/5:15} B:0 2.40010 [ 1.40052] ((7 . 2) (9 . 4) (11 . 5) (12 . 6) (13 . 7)) 4.407 {0/5:10} B:0 2.40049 [ 1.40244] ((5 . 2) (6 . 3) (7 . 4) (9 . 5) (13 . 7)) 6.480 {0/4:10} B:0 3.00020 [ 1.75098] ((6 . 1) (7 . 2) (8 . 3) (13 . 7)) 6.096 {0/3:6} B:0 3.00029 [ 1.75146] ((6 . 1) (11 . 4) (12 . 5) (13 . 7)) 6.726 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.5000 [and 1/min{score2}: 0.8569] [3732, 2340]: Comparing 1lu4_A and 1hyu_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 42 (16 H + 26 S) secondary structure elements in 1hyu_A, of which 8 satisfy the size requirements. 1.71430 [ 1.14290] ((5 . 9) (6 . 10) (7 . 11) (10 . 12) (11 . 13) (12 . 14) (13 . 15)) 1.999 {0/11:21} B:0 2.40005 [ 1.60017] ((7 . 9) (9 . 11) (10 . 12) (11 . 13) (13 . 15)) 3.695 {0/7:10} B:0 2.40011 [ 1.60038] ((5 . 9) (6 . 10) (7 . 11) (11 . 14) (13 . 15)) 4.491 {0/3:10} B:0 2.40022 [ 1.60074] ((7 . 9) (8 . 10) (9 . 11) (10 . 12) (13 . 15)) 5.308 {0/7:10} B:0 3.00021 [ 2.00071] ((5 . 9) (8 . 10) (10 . 12) (13 . 15)) 6.203 {0/5:6} B:0 SIMILARITY (1/min{score1}): 0.5833 [and 1/min{score2}: 0.8750] [3732, 2529]: Comparing 1lu4_A and 1ilo_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 7 (3 H + 4 S) secondary structure elements in 1ilo_A, of which 7 satisfy the size requirements. 1.71434 [ 1.00027] ((5 . 1) (6 . 2) (7 . 3) (10 . 4) (11 . 5) (12 . 6) (13 . 7)) 2.903 {0/11:21} B:0 2.40004 [ 1.40022] ((7 . 1) (9 . 3) (10 . 4) (11 . 5) (12 . 6)) 3.555 {0/7:10} B:0 2.40037 [ 1.40187] ((7 . 1) (8 . 2) (9 . 3) (10 . 4) (13 . 7)) 6.059 {0/7:10} B:0 3.00006 [ 1.75032] ((5 . 1) (8 . 2) (9 . 3) (10 . 4)) 4.618 {0/3:6} B:0 5.15496 [ 5.01897] ((4 . 2) (5 . 3) (6 . 4) (8 . 7)) 10.111 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.5833 [and 1/min{score2}: 0.9997] [3732, 2661]: Comparing 1lu4_A and 1iyh_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 13 (9 H + 4 S) secondary structure elements in 1iyh_A, of which 7 satisfy the size requirements. 1.76201 [ 1.18958] ((5 . 1) (6 . 2) (9 . 3) (10 . 4) (11 . 5) (12 . 6) (13 . 7)) 3.590 {1/10:21} B:0 1.78546 [ 1.26071] ((5 . 1) (6 . 2) (7 . 3) (10 . 4) (11 . 5) (12 . 6) (13 . 7)) 3.397 {1/9:21} B:0 2.00001 [ 1.16673] ((5 . 1) (6 . 2) (7 . 3) (10 . 4) (11 . 5) (12 . 6)) 2.237 {0/7:15} B:0 2.02119 [ 1.26263] ((7 . 1) (8 . 2) (9 . 3) (10 . 4) (11 . 5) (12 . 6)) 4.446 {1/11:15} B:0 4.28469 [ 4.03628] ((7 . 1) (8 . 2) (10 . 4) (13 . 7)) 6.974 {2/5:6} B:0 SIMILARITY (1/min{score1}): 0.5723 [and 1/min{score2}: 0.8776] [3732, 2685]: Comparing 1lu4_A and 1j0f_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 8 (4 H + 4 S) secondary structure elements in 1j0f_A, of which 8 satisfy the size requirements. 1.71435 [ 1.14308] ((5 . 1) (6 . 2) (7 . 3) (10 . 4) (11 . 5) (12 . 6) (13 . 8)) 3.060 {0/11:21} B:0 2.40003 [ 1.60009] ((7 . 1) (9 . 3) (10 . 4) (11 . 5) (12 . 6)) 3.158 {0/7:10} B:0 3.00003 [ 2.00011] ((7 . 1) (8 . 2) (9 . 3) (10 . 4)) 3.886 {0/3:6} B:0 3.00012 [ 2.00041] ((5 . 1) (6 . 2) (7 . 3) (11 . 6)) 5.431 {0/0:6} B:0 3.00049 [ 2.00166] ((5 . 1) (6 . 2) (7 . 3) (10 . 7)) 7.683 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.5833 [and 1/min{score2}: 0.8748] [3732, 2776]: Comparing 1lu4_A and 1j9b_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 13 (7 H + 6 S) secondary structure elements in 1j9b_A, of which 10 satisfy the size requirements. 1.71452 [ 1.42898] ((5 . 1) (6 . 2) (7 . 3) (10 . 4) (11 . 9) (12 . 10) (13 . 11)) 4.196 {0/10:21} B:0 2.00004 [ 1.66673] ((5 . 1) (6 . 2) (7 . 3) (11 . 9) (12 . 10) (13 . 11)) 2.973 {0/4:15} B:0 3.00010 [ 2.50017] ((7 . 1) (8 . 2) (9 . 3) (10 . 4)) 5.128 {0/3:6} B:0 3.00030 [ 2.50053] ((4 . 2) (6 . 4) (8 . 6) (12 . 9)) 6.812 {0/5:6} B:0 3.53794 [ 3.43670] ((4 . 2) (5 . 3) (11 . 9) (12 . 10) (13 . 11)) 7.220 {1/3:10} B:0 SIMILARITY (1/min{score1}): 0.5833 [and 1/min{score2}: 0.6998] [3732, 2856]: Comparing 1lu4_A and 1jfu_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 15 (7 H + 8 S) secondary structure elements in 1jfu_A, of which 13 satisfy the size requirements. 1.20004 [ 1.30003] ((2 . 4) (3 . 5) (5 . 7) (6 . 8) (7 . 9) (8 . 10) (10 . 12) (11 . 13) (12 . 14) (13 . 15)) 2.091 {0/33:45} B:0 1.22329 [ 1.29053] ((2 . 4) (3 . 5) (4 . 6) (5 . 7) (6 . 8) (7 . 9) (8 . 10) (10 . 12) (11 . 13) (12 . 14) (13 . 15)) 2.128 {4/42:55} B:0 3.00222 [ 3.25175] ((4 . 1) (8 . 6) (9 . 7) (13 . 10)) 11.204 {0/5:6} B:0 3.07033 [ 3.30584] ((2 . 9) (4 . 10) (6 . 12) (10 . 15)) 9.975 {1/6:6} B:0 3.78171 [ 3.91571] ((2 . 7) (4 . 8) (5 . 9) (8 . 12)) 8.249 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.8333 [and 1/min{score2}: 0.7749] [3732, 2961]: Comparing 1lu4_A and 1jlv_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 16 (12 H + 4 S) secondary structure elements in 1jlv_A, of which 8 satisfy the size requirements. 1.82447 [ 1.42726] ((5 . 1) (6 . 2) (7 . 3) (10 . 4) (11 . 6) (12 . 7) (13 . 8)) 3.523 {1/8:21} B:0 2.00033 [ 1.33444] ((7 . 1) (8 . 2) (9 . 3) (10 . 5) (11 . 6) (12 . 7)) 5.120 {0/10:15} B:0 2.11912 [ 1.64522] ((5 . 1) (6 . 2) (7 . 3) (10 . 4) (11 . 6) (12 . 7)) 2.872 {1/7:15} B:0 3.00014 [ 2.00046] ((3 . 3) (4 . 4) (7 . 7) (8 . 8)) 5.572 {0/5:6} B:0 3.78154 [ 3.43666] ((8 . 2) (9 . 3) (10 . 4) (13 . 8)) 6.857 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.5481 [and 1/min{score2}: 0.7494] [3732, 3109]: Comparing 1lu4_A and 1k0d_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 18 (14 H + 4 S) secondary structure elements in 1k0d_A, of which 9 satisfy the size requirements. 1.71440 [ 1.28598] ((5 . 1) (6 . 2) (7 . 3) (10 . 5) (11 . 6) (12 . 8) (13 . 9)) 3.499 {0/8:21} B:0 1.71443 [ 1.28604] ((5 . 1) (6 . 2) (7 . 3) (10 . 4) (11 . 6) (12 . 8) (13 . 9)) 3.684 {0/8:21} B:0 2.00003 [ 1.50008] ((5 . 1) (6 . 2) (7 . 3) (11 . 6) (12 . 8) (13 . 9)) 2.861 {0/2:15} B:0 2.40004 [ 1.80010] ((7 . 1) (9 . 3) (10 . 4) (11 . 6) (12 . 8)) 3.527 {0/7:10} B:0 2.40013 [ 1.80030] ((7 . 1) (8 . 2) (9 . 3) (10 . 5) (11 . 6)) 4.642 {0/6:10} B:0 SIMILARITY (1/min{score1}): 0.5833 [and 1/min{score2}: 0.7776] [3732, 3115]: Comparing 1lu4_A and 1k0m_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 15 (11 H + 4 S) secondary structure elements in 1k0m_A, of which 7 satisfy the size requirements. 1.71438 [ 1.00050] ((5 . 1) (6 . 2) (9 . 3) (10 . 4) (11 . 5) (12 . 6) (13 . 7)) 3.379 {0/9:21} B:0 3.00012 [ 1.75058] ((5 . 1) (8 . 2) (9 . 3) (10 . 4)) 5.343 {0/3:6} B:0 3.00027 [ 1.75135] ((8 . 2) (9 . 3) (10 . 4) (13 . 7)) 6.601 {0/3:6} B:0 3.00029 [ 1.75144] ((7 . 1) (8 . 2) (10 . 4) (13 . 7)) 6.703 {0/3:6} B:0 3.00061 [ 1.75307] ((5 . 1) (6 . 2) (7 . 3) (10 . 7)) 8.106 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.5833 [and 1/min{score2}: 0.9995] [3732, 3168]: Comparing 1lu4_A and 1k3y_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 14 (10 H + 4 S) secondary structure elements in 1k3y_A, of which 7 satisfy the size requirements. 2.03084 [ 1.30073] ((7 . 1) (8 . 2) (9 . 3) (10 . 4) (11 . 5) (12 . 6)) 5.042 {1/10:15} B:0 2.40181 [ 1.40903] ((5 . 1) (6 . 2) (7 . 3) (9 . 6) (10 . 7)) 9.000 {0/4:10} B:0 3.31061 [ 2.63903] ((6 . 2) (8 . 4) (9 . 6) (10 . 7)) 7.991 {1/4:6} B:0 3.53785 [ 3.35913] ((7 . 1) (8 . 2) (9 . 3) (10 . 4) (13 . 7)) 6.362 {2/6:10} B:0 5.15473 [ 5.01872] ((4 . 2) (5 . 3) (6 . 4) (9 . 6)) 6.749 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.4924 [and 1/min{score2}: 0.7688] [3732, 3362]: Comparing 1lu4_A and 1kng_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 13 (6 H + 7 S) secondary structure elements in 1kng_A, of which 11 satisfy the size requirements. 1.20184 [ 1.10239] ((4 . 3) (5 . 4) (6 . 5) (7 . 6) (8 . 7) (9 . 8) (10 . 9) (11 . 10) (12 . 11) (13 . 13)) 2.279 {1/30:45} B:0 1.20207 [ 1.10269] ((4 . 3) (5 . 4) (6 . 5) (7 . 6) (8 . 7) (9 . 8) (10 . 9) (11 . 10) (12 . 11) (13 . 12)) 1.932 {1/29:45} B:0 3.00081 [ 2.75105] ((8 . 3) (10 . 5) (11 . 6) (13 . 9)) 8.698 {0/3:6} B:0 3.07077 [ 2.84061] ((2 . 6) (4 . 7) (6 . 9) (10 . 13)) 10.729 {1/6:6} B:0 5.15579 [ 5.11180] ((2 . 6) (4 . 7) (6 . 9) (8 . 12)) 14.151 {3/6:6} B:0 SIMILARITY (1/min{score1}): 0.8321 [and 1/min{score2}: 0.9071] [3732, 3427]: Comparing 1lu4_A and 1kte, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 10 (6 H + 4 S) secondary structure elements in 1kte, of which 9 satisfy the size requirements. 1.65523 [ 1.41824] ((4 . 1) (5 . 2) (6 . 3) (7 . 4) (10 . 6) (11 . 7) (12 . 8) (13 . 10)) 3.598 {2/16:28} B:0 2.00006 [ 1.50013] ((7 . 2) (9 . 4) (10 . 6) (11 . 7) (12 . 8) (13 . 10)) 3.285 {0/10:15} B:0 2.53019 [ 2.06841] ((5 . 2) (6 . 3) (7 . 4) (10 . 9) (13 . 10)) 8.770 {1/6:10} B:0 2.64883 [ 2.26992] ((5 . 2) (6 . 3) (7 . 4) (9 . 8) (10 . 9)) 7.611 {1/5:10} B:0 3.00002 [ 2.25005] ((7 . 2) (8 . 3) (9 . 4) (10 . 6)) 3.457 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.6041 [and 1/min{score2}: 0.7051] [3732, 3641]: Comparing 1lu4_A and 1ljr_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 17 (13 H + 4 S) secondary structure elements in 1ljr_A, of which 8 satisfy the size requirements. 1.71434 [ 1.14302] ((5 . 1) (6 . 2) (7 . 3) (10 . 5) (11 . 6) (12 . 7) (13 . 8)) 2.843 {0/8:21} B:0 2.40131 [ 1.60442] ((5 . 1) (6 . 2) (7 . 3) (9 . 7) (10 . 8)) 8.308 {0/3:10} B:0 2.44314 [ 1.73225] ((7 . 1) (8 . 2) (10 . 5) (11 . 6) (12 . 7)) 4.934 {1/8:10} B:0 3.31037 [ 2.72437] ((7 . 1) (8 . 2) (10 . 5) (13 . 8)) 6.474 {1/4:6} B:0 3.31039 [ 2.72442] ((7 . 1) (8 . 2) (10 . 4) (13 . 8)) 6.684 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.5833 [and 1/min{score2}: 0.8749] [3732, 3732]: Comparing 1lu4_A and 1lu4_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. 1.00000 [ 1.00000] ((2 . 2) (3 . 3) (4 . 4) (5 . 5) (6 . 6) (7 . 7) (8 . 8) (9 . 9) (10 . 10) (11 . 11) (12 . 12) (13 . 13)) 0.000 {0/53:66} B:0 2.52882 [ 2.52882] ((4 . 4) (6 . 6) (7 . 7) (11 . 12) (13 . 13)) 3.153 {1/6:10} B:0 2.52882 [ 2.52882] ((4 . 4) (6 . 6) (7 . 7) (12 . 11) (13 . 13)) 3.153 {1/6:10} B:0 3.00087 [ 3.00087] ((8 . 4) (10 . 6) (11 . 7) (13 . 10)) 8.851 {0/4:6} B:0 3.00087 [ 3.00087] ((4 . 8) (6 . 10) (7 . 11) (10 . 13)) 8.851 {0/4:6} B:0 SIMILARITY (1/min{score1}): 1.0000 [and 1/min{score2}: 1.0000] [3732, 3800]: Comparing 1lu4_A and 1m2d_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 10 (5 H + 5 S) secondary structure elements in 1m2d_A, of which 8 satisfy the size requirements. 2.00001 [ 1.33336] ((5 . 1) (6 . 2) (7 . 4) (11 . 6) (12 . 7) (13 . 8)) 2.071 {0/4:15} B:0 2.40001 [ 1.60002] ((5 . 1) (6 . 2) (7 . 4) (11 . 6) (13 . 8)) 2.072 {0/2:10} B:0 2.40001 [ 1.60002] ((5 . 1) (7 . 4) (11 . 6) (12 . 7) (13 . 8)) 2.132 {0/2:10} B:0 2.40171 [ 1.60574] ((5 . 1) (10 . 3) (11 . 6) (12 . 7) (13 . 8)) 8.872 {0/4:10} B:0 2.40271 [ 1.60909] ((7 . 1) (10 . 3) (11 . 6) (12 . 7) (13 . 8)) 9.961 {0/5:10} B:0 SIMILARITY (1/min{score1}): 0.5000 [and 1/min{score2}: 0.7500] [3732, 3915]: Comparing 1lu4_A and 1mek, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 10 (4 H + 6 S) secondary structure elements in 1mek, of which 8 satisfy the size requirements. 1.85332 [ 1.48534] ((4 . 3) (5 . 4) (6 . 5) (9 . 6) (10 . 7) (11 . 8) (13 . 10)) 2.845 {2/15:21} B:0 2.04812 [ 1.47683] ((6 . 3) (7 . 4) (9 . 6) (10 . 7) (11 . 8) (13 . 10)) 8.293 {1/9:15} B:0 2.40019 [ 1.60065] ((7 . 4) (8 . 5) (9 . 6) (10 . 7) (13 . 10)) 5.131 {0/7:10} B:0 2.40022 [ 1.60075] ((8 . 5) (9 . 6) (10 . 7) (11 . 8) (13 . 10)) 5.331 {0/7:10} B:0 3.31203 [ 2.72736] ((6 . 3) (7 . 4) (8 . 5) (13 . 10)) 11.523 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.6314 [and 1/min{score2}: 0.8183] [3732, 4113]: Comparing 1lu4_A and 1n2a_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 15 (10 H + 5 S) secondary structure elements in 1n2a_A, of which 6 satisfy the size requirements. 2.40020 [ 1.20162] ((7 . 1) (8 . 2) (9 . 3) (11 . 6) (12 . 7)) 5.209 {0/5:10} B:0 2.40142 [ 1.21121] ((5 . 1) (6 . 2) (7 . 3) (9 . 7) (10 . 8)) 8.471 {0/3:10} B:0 3.00025 [ 1.50198] ((5 . 1) (6 . 2) (7 . 3) (11 . 7)) 6.471 {0/0:6} B:0 3.00035 [ 1.50282] ((7 . 1) (8 . 2) (9 . 3) (13 . 8)) 7.072 {0/0:6} B:0 10.02020 [10.00128] ((5 . 1) (7 . 3) (9 . 6) (10 . 8)) 7.242 {1/1:6} B:0 SIMILARITY (1/min{score1}): 0.4166 [and 1/min{score2}: 0.8322] [3732, 4161]: Comparing 1lu4_A and 1n8j_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 16 (7 H + 9 S) secondary structure elements in 1n8j_A, of which 13 satisfy the size requirements. 1.02724 [ 1.10499] ((2 . 1) (3 . 2) (4 . 3) (5 . 4) (6 . 5) (7 . 7) (8 . 8) (9 . 10) (10 . 11) (11 . 14) (12 . 15) (13 . 16)) 3.650 {3/52:66} B:0 1.10015 [ 1.18911] ((2 . 1) (3 . 2) (4 . 3) (5 . 4) (6 . 5) (7 . 7) (9 . 10) (10 . 11) (11 . 14) (12 . 15) (13 . 16)) 3.292 {2/43:55} B:0 3.00069 [ 3.25055] ((5 . 7) (6 . 8) (7 . 10) (13 . 16)) 8.372 {0/3:6} B:0 3.13833 [ 3.36077] ((3 . 10) (4 . 11) (7 . 15) (8 . 16)) 4.380 {1/5:6} B:0 3.13935 [ 3.36160] ((6 . 3) (7 . 4) (10 . 6) (13 . 11)) 9.637 {1/5:6} B:0 SIMILARITY (1/min{score1}): 0.9735 [and 1/min{score2}: 0.9050] [3732, 4260]: Comparing 1lu4_A and 1nhy_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 18 (14 H + 4 S) secondary structure elements in 1nhy_A, of which 7 satisfy the size requirements. 1.71435 [ 1.00032] ((5 . 1) (6 . 2) (7 . 3) (10 . 5) (11 . 6) (12 . 8) (13 . 9)) 3.023 {0/8:21} B:0 2.00002 [ 1.16676] ((5 . 1) (6 . 2) (7 . 3) (10 . 5) (11 . 6) (12 . 8)) 2.485 {0/7:15} B:0 2.40005 [ 1.40027] ((7 . 1) (9 . 3) (10 . 5) (11 . 6) (12 . 8)) 3.728 {0/7:10} B:0 2.40111 [ 1.40555] ((5 . 1) (6 . 2) (7 . 3) (9 . 8) (10 . 9)) 7.960 {0/3:10} B:0 3.00004 [ 1.75019] ((7 . 1) (8 . 2) (9 . 3) (10 . 5)) 4.035 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.5833 [and 1/min{score2}: 0.9997] [3732, 4310]: Comparing 1lu4_A and 1nm3_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 22 (9 H + 13 S) secondary structure elements in 1nm3_A, of which 15 satisfy the size requirements. 1.00647 [ 1.25333] ((2 . 1) (3 . 2) (4 . 3) (5 . 4) (6 . 6) (7 . 7) (8 . 8) (9 . 9) (10 . 10) (11 . 13) (12 . 14) (13 . 15)) 3.576 {2/51:66} B:0 1.00653 [ 1.25336] ((2 . 1) (3 . 2) (4 . 3) (5 . 4) (6 . 5) (7 . 7) (8 . 8) (9 . 9) (10 . 10) (11 . 13) (12 . 14) (13 . 15)) 3.654 {2/51:66} B:0 1.71539 [ 2.14343] ((4 . 3) (5 . 4) (6 . 5) (7 . 7) (8 . 8) (10 . 10) (12 . 11)) 6.187 {0/17:21} B:0 2.00061 [ 2.50031] ((7 . 7) (8 . 8) (9 . 9) (10 . 10) (11 . 12) (13 . 15)) 5.993 {0/10:15} B:0 3.00022 [ 3.75011] ((5 . 7) (6 . 8) (7 . 9) (13 . 15)) 6.270 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.9936 [and 1/min{score2}: 0.7979] [3732, 4311]: Comparing 1lu4_A and 1nm3_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 22 (9 H + 13 S) secondary structure elements in 1nm3_A, of which 7 satisfy the size requirements. 2.03072 [ 1.30028] ((7 . 16) (8 . 17) (9 . 18) (10 . 19) (11 . 20) (12 . 21)) 4.437 {1/10:15} B:0 3.00031 [ 1.75158] ((7 . 16) (8 . 17) (10 . 19) (13 . 22)) 6.863 {0/3:6} B:0 3.13902 [ 2.24648] ((3 . 20) (4 . 19) (5 . 21) (6 . 22)) 8.763 {1/5:6} B:1 3.31038 [ 2.63856] ((3 . 18) (4 . 19) (6 . 22) (7 . 21)) 6.549 {1/4:6} B:1 4.38742 [ 4.29788] ((3 . 18) (4 . 19) (5 . 21) (7 . 20) (9 . 16)) 4.304 {3/7:10} B:2 SIMILARITY (1/min{score1}): 0.4924 [and 1/min{score2}: 0.7691] [3732, 4555]: Comparing 1lu4_A and 1o8x_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 13 (6 H + 7 S) secondary structure elements in 1o8x_A, of which 11 satisfy the size requirements. 1.21724 [ 1.12219] ((2 . 2) (3 . 3) (4 . 4) (5 . 5) (6 . 6) (7 . 7) (8 . 8) (10 . 10) (11 . 11) (12 . 12)) 3.398 {2/34:45} B:0 1.53728 [ 1.50780] ((2 . 2) (3 . 3) (4 . 4) (5 . 5) (6 . 6) (7 . 7) (8 . 8) (10 . 10) (11 . 11) (12 . 12) (13 . 13)) 3.928 {6/42:55} B:0 2.58086 [ 2.50956] ((4 . 4) (6 . 6) (7 . 7) (8 . 8) (10 . 10) (13 . 13)) 4.477 {3/13:15} B:0 3.00082 [ 2.75107] ((8 . 4) (10 . 6) (11 . 7) (13 . 10)) 8.739 {0/4:6} B:0 3.07054 [ 2.84031] ((7 . 3) (8 . 4) (10 . 6) (13 . 10)) 10.344 {1/6:6} B:0 SIMILARITY (1/min{score1}): 0.8215 [and 1/min{score2}: 0.8911] [3732, 4724]: Comparing 1lu4_A and 1on4_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 14 (6 H + 8 S) secondary structure elements in 1on4_A, of which 12 satisfy the size requirements. 1.09993 [ 1.09993] ((2 . 2) (3 . 3) (4 . 4) (5 . 5) (6 . 6) (7 . 7) (8 . 8) (9 . 10) (10 . 11) (11 . 12) (12 . 13)) 2.517 {2/43:55} B:0 4.28469 [ 4.28469] ((3 . 7) (8 . 11) (11 . 13) (13 . 14)) 7.015 {2/5:6} B:0 4.38741 [ 4.38741] ((3 . 2) (4 . 4) (5 . 5) (6 . 6) (7 . 7)) 3.567 {3/7:10} B:0 5.15468 [ 5.15468] ((3 . 2) (4 . 4) (6 . 6) (9 . 7)) 4.098 {3/6:6} B:0 7.54755 [ 7.54755] ((6 . 4) (7 . 5) (9 . 7) (10 . 8)) 5.312 {3/4:6} B:0 SIMILARITY (1/min{score1}): 0.9092 [and 1/min{score2}: 0.9092] [3732, 4797]: Comparing 1lu4_A and 1ovn_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 16 (11 H + 5 S) secondary structure elements in 1ovn_A, of which 9 satisfy the size requirements. 1.51122 [ 1.15099] ((4 . 2) (5 . 3) (6 . 4) (7 . 5) (10 . 6) (11 . 8) (12 . 9) (13 . 10)) 2.530 {1/16:28} B:0 2.00009 [ 1.50022] ((7 . 3) (9 . 5) (10 . 6) (11 . 8) (12 . 9) (13 . 10)) 3.752 {0/10:15} B:0 2.40027 [ 1.80064] ((7 . 3) (8 . 4) (9 . 5) (10 . 6) (13 . 10)) 5.587 {0/7:10} B:0 3.06910 [ 2.40317] ((3 . 5) (4 . 6) (7 . 9) (8 . 10)) 4.806 {1/6:6} B:0 3.31243 [ 2.83960] ((8 . 2) (9 . 3) (10 . 4) (13 . 6)) 12.091 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.7194 [and 1/min{score2}: 0.8930] [3732, 4836]: Comparing 1lu4_A and 1oyj_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 15 (11 H + 4 S) secondary structure elements in 1oyj_A, of which 7 satisfy the size requirements. 2.40002 [ 1.40009] ((7 . 1) (9 . 3) (10 . 4) (11 . 5) (12 . 6)) 2.820 {0/7:10} B:0 3.00002 [ 1.75012] ((7 . 1) (9 . 3) (10 . 4) (13 . 7)) 3.567 {0/3:6} B:0 3.00003 [ 1.75016] ((7 . 1) (8 . 2) (9 . 3) (10 . 4)) 3.902 {0/3:6} B:0 3.00025 [ 1.75125] ((7 . 1) (8 . 2) (10 . 4) (13 . 7)) 6.478 {0/3:6} B:0 3.00066 [ 1.75332] ((5 . 1) (6 . 2) (7 . 3) (10 . 7)) 8.271 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.5000 [and 1/min{score2}: 0.8570] [3732, 5059]: Comparing 1lu4_A and 1pn0_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 49 (20 H + 29 S) secondary structure elements in 1pn0_A, of which 11 satisfy the size requirements. 1.20172 [ 1.10223] ((2 . 37) (3 . 38) (5 . 40) (6 . 41) (7 . 43) (9 . 45) (10 . 46) (11 . 47) (12 . 48) (13 . 49)) 2.895 {1/31:45} B:0 1.33793 [ 1.22818] ((3 . 38) (5 . 40) (6 . 41) (7 . 43) (9 . 45) (10 . 46) (11 . 47) (12 . 48) (13 . 49)) 2.940 {1/22:36} B:0 1.73191 [ 1.59417] ((6 . 42) (7 . 43) (9 . 45) (10 . 46) (11 . 47) (12 . 48) (13 . 49)) 5.132 {1/13:21} B:0 2.40014 [ 2.20018] ((2 . 37) (3 . 38) (5 . 40) (6 . 41) (9 . 43)) 4.765 {0/7:10} B:0 3.00006 [ 2.75008] ((3 . 45) (4 . 46) (7 . 48) (8 . 49)) 4.533 {0/5:6} B:0 SIMILARITY (1/min{score1}): 0.9139 [and 1/min{score2}: 0.9957] [3732, 5090]: Comparing 1lu4_A and 1prx_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 18 (7 H + 11 S) secondary structure elements in 1prx_A, of which 16 satisfy the size requirements. 1.18934 [ 1.42827] ((2 . 1) (3 . 2) (4 . 3) (5 . 4) (6 . 5) (7 . 7) (8 . 8) (9 . 9) (10 . 10) (11 . 11) (12 . 12) (13 . 13)) 2.790 {5/50:66} B:0 2.03061 [ 2.67978] ((5 . 7) (9 . 9) (10 . 10) (11 . 11) (12 . 12) (13 . 13)) 3.470 {1/10:15} B:0 3.00004 [ 4.00002] ((3 . 9) (4 . 10) (7 . 12) (8 . 13)) 4.150 {0/5:6} B:0 3.00036 [ 4.00015] ((6 . 3) (7 . 4) (9 . 7) (12 . 9)) 7.128 {0/2:6} B:0 3.00164 [ 4.00069] ((7 . 2) (9 . 4) (11 . 7) (13 . 8)) 10.376 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.8408 [and 1/min{score2}: 0.7001] [3732, 5258]: Comparing 1lu4_A and 1q98_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 16 (5 H + 11 S) secondary structure elements in 1q98_A, of which 14 satisfy the size requirements. 1.22906 [ 1.33059] ((2 . 4) (3 . 5) (4 . 6) (5 . 7) (6 . 8) (7 . 9) (8 . 10) (9 . 11) (10 . 12) (11 . 14) (12 . 15) (13 . 16)) 2.907 {5/47:66} B:0 2.40003 [ 2.80002] ((5 . 9) (7 . 11) (11 . 14) (12 . 15) (13 . 16)) 3.168 {0/3:10} B:0 3.78216 [ 4.06737] ((2 . 9) (4 . 10) (6 . 12) (10 . 16)) 10.240 {2/6:6} B:0 6.73409 [ 6.78993] ((2 . 9) (4 . 10) (5 . 11) (8 . 16)) 9.512 {4/6:6} B:0 7.54759 [ 7.58743] ((2 . 7) (5 . 9) (7 . 11) (8 . 12)) 8.221 {3/4:6} B:0 SIMILARITY (1/min{score1}): 0.8136 [and 1/min{score2}: 0.7515] [3732, 5328]: Comparing 1lu4_A and 1qgv_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 8 (3 H + 5 S) secondary structure elements in 1qgv_A, of which 8 satisfy the size requirements. 1.78545 [ 1.34080] ((4 . 1) (5 . 2) (6 . 3) (7 . 4) (11 . 5) (12 . 6) (13 . 7)) 3.279 {1/9:21} B:0 2.20682 [ 1.81608] ((4 . 1) (5 . 2) (6 . 3) (7 . 4) (11 . 5) (13 . 7)) 3.045 {1/6:15} B:0 3.00038 [ 2.00127] ((3 . 4) (7 . 6) (8 . 7) (9 . 8)) 7.184 {0/4:6} B:0 3.00067 [ 2.00226] ((6 . 1) (7 . 2) (11 . 5) (13 . 7)) 8.298 {0/2:6} B:0 3.31080 [ 2.72515] ((4 . 3) (7 . 5) (10 . 7) (11 . 8)) 8.756 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.5601 [and 1/min{score2}: 0.7458] [3732, 5390]: Comparing 1lu4_A and 1qmh_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 25 (10 H + 15 S) secondary structure elements in 1qmh_A, of which 6 satisfy the size requirements. 2.40023 [ 1.20185] ((7 . 14) (8 . 15) (9 . 16) (11 . 18) (12 . 19)) 5.384 {0/3:10} B:0 3.00006 [ 1.50045] ((5 . 14) (6 . 15) (7 . 16) (13 . 20)) 4.462 {0/2:6} B:0 3.00018 [ 1.50144] ((7 . 14) (8 . 15) (9 . 16) (13 . 20)) 5.978 {0/2:6} B:0 6.73408 [ 6.67103] ((4 . 15) (5 . 16) (7 . 19) (8 . 20)) 9.374 {2/3:6} B:0 SIMILARITY (1/min{score1}): 0.4166 [and 1/min{score2}: 0.8321] [3732, 5391]: Comparing 1lu4_A and 1qmv_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 17 (8 H + 9 S) secondary structure elements in 1qmv_A, of which 14 satisfy the size requirements. 1.00678 [ 1.17096] ((2 . 1) (3 . 2) (4 . 3) (5 . 4) (6 . 5) (7 . 7) (8 . 8) (9 . 10) (10 . 11) (11 . 14) (12 . 15) (13 . 16)) 3.959 {2/51:66} B:0 1.71480 [ 2.00032] ((6 . 6) (7 . 7) (9 . 10) (10 . 11) (11 . 14) (12 . 15) (13 . 16)) 5.108 {0/12:21} B:0 3.00141 [ 3.50089] ((4 . 3) (6 . 5) (8 . 6) (9 . 7)) 9.997 {0/3:6} B:0 3.00506 [ 3.50319] ((4 . 11) (7 . 15) (8 . 16) (10 . 17)) 13.763 {0/5:6} B:0 3.07081 [ 3.54531] ((2 . 7) (4 . 8) (6 . 11) (10 . 16)) 10.791 {1/6:6} B:0 SIMILARITY (1/min{score1}): 0.9933 [and 1/min{score2}: 0.8540] [3732, 5528]: Comparing 1lu4_A and 1r26_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 9 (4 H + 5 S) secondary structure elements in 1r26_A, of which 9 satisfy the size requirements. 2.40001 [ 1.80003] ((7 . 3) (10 . 6) (11 . 7) (12 . 8) (13 . 9)) 2.692 {0/5:10} B:0 2.52921 [ 2.06660] ((5 . 1) (7 . 3) (8 . 4) (9 . 5) (10 . 6)) 6.454 {1/6:10} B:0 4.28496 [ 4.09701] ((4 . 2) (6 . 4) (9 . 8) (10 . 9)) 9.469 {2/5:6} B:0 5.15506 [ 5.05090] ((4 . 4) (5 . 5) (6 . 6) (8 . 9)) 10.834 {2/4:6} B:0 7.54767 [ 7.51527] ((4 . 4) (6 . 6) (7 . 8) (8 . 9)) 10.959 {3/4:6} B:0 SIMILARITY (1/min{score1}): 0.7194 [and 1/min{score2}: 0.8930] [3732, 5551]: Comparing 1lu4_A and 1r4w_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 14 (10 H + 4 S) secondary structure elements in 1r4w_A, of which 14 satisfy the size requirements. 1.50040 [ 1.75025] ((5 . 1) (6 . 2) (7 . 3) (8 . 9) (10 . 11) (11 . 12) (12 . 13) (13 . 14)) 4.340 {0/15:28} B:0 1.71433 [ 2.00003] ((5 . 1) (6 . 2) (7 . 3) (10 . 11) (11 . 12) (12 . 13) (13 . 14)) 2.754 {0/10:21} B:0 2.40165 [ 2.80104] ((6 . 9) (10 . 11) (11 . 12) (12 . 13) (13 . 14)) 8.795 {0/6:10} B:0 2.91572 [ 3.16672] ((6 . 8) (10 . 11) (11 . 12) (12 . 13) (13 . 14)) 6.897 {1/4:10} B:0 3.78158 [ 4.06691] ((4 . 2) (5 . 3) (6 . 4) (10 . 7)) 7.286 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.6665 [and 1/min{score2}: 0.5713] [3732, 5563]: Comparing 1lu4_A and 1r5p_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 7 (3 H + 4 S) secondary structure elements in 1r5p_A, of which 6 satisfy the size requirements. 3.00001 [ 1.50007] ((5 . 1) (6 . 2) (7 . 3) (11 . 7)) 2.816 {0/0:6} B:0 3.00012 [ 1.50098] ((5 . 1) (6 . 2) (7 . 3) (10 . 5)) 5.430 {0/2:6} B:0 3.00016 [ 1.50127] ((7 . 1) (8 . 2) (9 . 3) (10 . 5)) 5.787 {0/2:6} B:0 3.00070 [ 1.50556] ((4 . 2) (5 . 3) (6 . 5) (8 . 6)) 8.388 {0/1:6} B:0 3.00085 [ 1.50675] ((7 . 1) (8 . 2) (9 . 3) (13 . 6)) 8.805 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.4166 [and 1/min{score2}: 0.8320] [3732, 5850]: Comparing 1lu4_A and 1st9_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 14 (6 H + 8 S) secondary structure elements in 1st9_A, of which 13 satisfy the size requirements. 1.07796 [ 1.14646] ((2 . 2) (3 . 3) (4 . 4) (5 . 5) (6 . 6) (7 . 8) (8 . 9) (9 . 10) (10 . 11) (11 . 12) (12 . 13) (13 . 14)) 1.615 {4/52:66} B:0 1.09093 [ 1.18183] ((2 . 2) (3 . 3) (5 . 5) (6 . 6) (7 . 8) (8 . 9) (9 . 10) (10 . 11) (11 . 12) (12 . 13) (13 . 14)) 1.547 {0/42:55} B:0 2.00066 [ 2.16718] ((6 . 7) (7 . 8) (8 . 9) (9 . 10) (10 . 11) (13 . 14)) 6.090 {0/11:15} B:0 3.13962 [ 3.36182] ((3 . 8) (4 . 9) (6 . 11) (10 . 14)) 10.193 {1/5:6} B:0 3.31020 [ 3.50332] ((4 . 4) (6 . 6) (9 . 8) (13 . 14)) 3.851 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.9277 [and 1/min{score2}: 0.8722] [3732, 5868]: Comparing 1lu4_A and 1syr_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 9 (4 H + 5 S) secondary structure elements in 1syr_A, of which 9 satisfy the size requirements. 2.40003 [ 1.80008] ((7 . 3) (9 . 5) (10 . 6) (11 . 7) (12 . 8)) 3.353 {0/7:10} B:0 2.40006 [ 1.80015] ((7 . 3) (8 . 4) (9 . 5) (10 . 6) (11 . 7)) 3.874 {0/6:10} B:0 4.28495 [ 4.09700] ((4 . 2) (6 . 4) (9 . 8) (10 . 9)) 9.416 {2/5:6} B:0 5.15502 [ 5.05086] ((4 . 4) (5 . 5) (6 . 6) (8 . 9)) 10.579 {2/4:6} B:0 7.54768 [ 7.51528] ((4 . 4) (6 . 6) (7 . 8) (8 . 9)) 11.161 {3/4:6} B:0 SIMILARITY (1/min{score1}): 0.7194 [and 1/min{score2}: 0.8930] [3732, 5966]: Comparing 1lu4_A and 1uc7_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 11 (6 H + 5 S) secondary structure elements in 1uc7_A, of which 9 satisfy the size requirements. 1.73781 [ 1.33920] ((4 . 3) (5 . 4) (6 . 5) (7 . 7) (10 . 8) (11 . 9) (13 . 11)) 3.221 {1/12:21} B:0 2.07309 [ 1.65668] ((3 . 1) (5 . 4) (6 . 5) (7 . 7) (11 . 9) (13 . 11)) 6.590 {1/8:15} B:0 2.40004 [ 1.80011] ((7 . 4) (9 . 7) (10 . 8) (11 . 9) (13 . 11)) 3.560 {0/7:10} B:0 2.40057 [ 1.80135] ((3 . 1) (5 . 4) (10 . 8) (11 . 9) (13 . 11)) 6.738 {0/7:10} B:0 3.14012 [ 2.54353] ((8 . 3) (9 . 4) (10 . 5) (13 . 8)) 11.032 {1/5:6} B:0 SIMILARITY (1/min{score1}): 0.5754 [and 1/min{score2}: 0.7467] [3732, 6409]: Comparing 1lu4_A and 2bjx_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 8 (4 H + 4 S) secondary structure elements in 2bjx_A, of which 8 satisfy the size requirements. 2.40004 [ 1.60014] ((7 . 3) (9 . 5) (10 . 6) (11 . 7) (13 . 8)) 3.504 {0/7:10} B:0 3.00010 [ 2.00033] ((7 . 3) (8 . 4) (10 . 6) (13 . 8)) 5.141 {0/5:6} B:0 3.00081 [ 2.00274] ((7 . 1) (8 . 2) (10 . 4) (11 . 5)) 8.715 {0/2:6} B:0 3.00134 [ 2.00453] ((7 . 1) (8 . 2) (10 . 4) (13 . 6)) 9.879 {0/5:6} B:0 3.78139 [ 3.43647] ((5 . 1) (6 . 2) (7 . 5) (8 . 6)) 3.637 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.4668 [and 1/min{score2}: 0.6249] [3732, 6463]: Comparing 1lu4_A and 2gsq, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 13 (9 H + 4 S) secondary structure elements in 2gsq, of which 7 satisfy the size requirements. 1.71442 [ 1.00068] ((5 . 1) (6 . 2) (7 . 3) (10 . 4) (11 . 6) (12 . 7) (13 . 8)) 3.660 {0/8:21} B:0 1.71445 [ 1.00082] ((5 . 1) (6 . 2) (9 . 3) (10 . 4) (11 . 6) (12 . 7) (13 . 8)) 3.831 {0/9:21} B:0 2.00023 [ 1.16782] ((7 . 1) (8 . 2) (9 . 3) (10 . 4) (11 . 6) (12 . 7)) 4.687 {0/10:15} B:0 3.00039 [ 1.75194] ((7 . 1) (8 . 2) (10 . 4) (13 . 8)) 7.230 {0/3:6} B:0 5.15478 [ 5.01877] ((4 . 2) (5 . 3) (6 . 4) (9 . 7)) 7.807 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.5833 [and 1/min{score2}: 0.9993] [3732, 6548]: Comparing 1lu4_A and 2trc_P, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 15 (10 H + 5 S) secondary structure elements in 2trc_P, of which 13 satisfy the size requirements. 2.37901 [ 2.48396] ((4 . 6) (5 . 7) (6 . 8) (7 . 9) (10 . 14) (13 . 15)) 6.761 {2/10:15} B:0 2.40150 [ 2.60118] ((6 . 6) (7 . 7) (11 . 12) (12 . 13) (13 . 15)) 8.592 {0/4:10} B:0 2.64821 [ 2.80270] ((4 . 6) (5 . 7) (6 . 8) (9 . 9) (13 . 15)) 4.274 {1/5:10} B:0 3.00031 [ 3.25024] ((2 . 12) (3 . 13) (4 . 14) (6 . 15)) 6.833 {0/5:6} B:0 3.00094 [ 3.25074] ((7 . 5) (8 . 6) (10 . 8) (13 . 10)) 9.036 {0/6:6} B:0 SIMILARITY (1/min{score1}): 0.4668 [and 1/min{score2}: 0.4568] [3732, 6549]: Comparing 1lu4_A and 2trx_A, based on their crossing files. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. There are 9 (4 H + 5 S) secondary structure elements in 2trx_A, of which 9 satisfy the size requirements. 2.40001 [ 1.80003] ((7 . 3) (10 . 6) (11 . 7) (12 . 8) (13 . 9)) 2.601 {0/6:10} B:0 2.40004 [ 1.80010] ((7 . 3) (9 . 5) (10 . 6) (11 . 7) (13 . 9)) 3.494 {0/7:10} B:0 2.40016 [ 1.80038] ((7 . 3) (8 . 4) (9 . 5) (10 . 6) (13 . 9)) 4.925 {0/7:10} B:0 3.07044 [ 2.40596] ((7 . 1) (8 . 2) (10 . 4) (13 . 6)) 10.175 {1/6:6} B:0 5.15506 [ 5.05090] ((4 . 4) (5 . 5) (6 . 6) (8 . 9)) 10.843 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.5506 [and 1/min{score2}: 0.5820] -------------------------------------------------------------------------------------------------------------------------