------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 2456 1ic6_A) ( 1786 1ga6_A) 0.9365 0.6249 3.4092 ( 2 83 105) 0 0.9365 0.6249 16 24 ( 2456 1ic6_A) ( 1793 1gci ) 0.9375 0.8333 1.7251 ( 0 85 105) 0 0.9375 0.8333 16 18 ( 2456 1ic6_A) ( 1944 1gt9_1) 0.9367 0.7141 2.9870 ( 2 83 105) 0 0.9367 0.7141 16 21 ( 2456 1ic6_A) ( 2456 1ic6_A) 1.0000 1.0000 0.0000 ( 0 100 120) 0 1.0000 1.0000 16 16 ( 2456 1ic6_A) ( 5568 1r64_A) 0.8124 0.7222 2.5195 ( 0 57 78) 0 0.8124 0.7222 16 18 -------------------------------------------------------------------------------------------------------------------------