------------------------------------------------------------------------------------------------------------------------- Will print the top 5 alignments (based on backbone shifts) for each pairing of chains, as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: score1 [score2] pairings L2ERR {Xbad/Xsig:Xtot} Breaks (score2 is the score from protein2's perspective, not the minimum of the two perspectives as in some earlier printouts.) Recall that "SIMILARITY" refers to similarities over all alignments not just the top ones. ------------------------------------------------------------------------------------------------------------------------- [3751, 281]: Comparing 1lvl and 1b37_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 38 (16 H + 22 S) secondary structure elements in 1b37_A, of which 25 satisfy the size requirements. 1.28584 [ 3.57143] ((16 . 1) (17 . 2) (18 . 3) (19 . 17) (21 . 19) (22 . 20) (24 . 22)) 2.921 {0/9:21} B:0 1.80004 [ 5.00000] ((17 . 2) (19 . 17) (21 . 19) (22 . 20) (24 . 22)) 2.804 {0/5:10} B:0 1.80339 [ 5.00016] ((17 . 15) (19 . 17) (21 . 19) (22 . 20) (24 . 22)) 8.493 {0/5:10} B:0 2.25063 [ 6.25003] ((16 . 19) (18 . 21) (19 . 23) (20 . 24)) 6.574 {0/2:6} B:0 2.25067 [ 6.25003] ((16 . 1) (17 . 2) (18 . 3) (19 . 7)) 6.691 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.7777 [and 1/min{score2}: 0.3155] [3751, 594]: Comparing 1lvl and 1chu_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 36 (19 H + 17 S) secondary structure elements in 1chu_A, of which 15 satisfy the size requirements. 1.15104 [ 1.88080] ((16 . 2) (17 . 3) (18 . 4) (19 . 7) (20 . 8) (21 . 9) (22 . 11) (24 . 29)) 2.814 {1/16:28} B:0 2.25044 [ 3.75010] ((15 . 3) (19 . 7) (20 . 8) (21 . 9)) 6.031 {0/4:6} B:0 2.25096 [ 3.75021] ((17 . 6) (21 . 9) (22 . 11) (24 . 13)) 7.325 {0/4:6} B:0 1.00099 [ 1.66688] ((15 . 32) (16 . 2) (17 . 3) (18 . 4) (19 . 7) (20 . 8) (21 . 9) (22 . 11) (24 . 13)) 4.013 {0/18:36} B:1 3.49448 [ 4.23359] ((15 . 3) (16 . 4) (21 . 9) (22 . 8)) 6.772 {1/3:6} B:1 SIMILARITY (1/min{score1}): 0.9990 [and 1/min{score2}: 0.5999] [3751, 756]: Comparing 1lvl and 1d5t_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 39 (20 H + 19 S) secondary structure elements in 1d5t_A, of which 25 satisfy the size requirements. 2.25006 [ 6.25000] ((19 . 23) (21 . 24) (22 . 25) (24 . 27)) 3.595 {0/3:6} B:0 2.26024 [ 6.25048] ((15 . 2) (16 . 3) (17 . 5) (22 . 12)) 13.247 {0/3:6} B:0 3.49447 [ 6.37279] ((19 . 10) (20 . 12) (21 . 13) (22 . 14)) 6.714 {1/3:6} B:0 3.49589 [ 6.37302] ((15 . 21) (17 . 23) (20 . 25) (22 . 27)) 11.566 {1/3:6} B:0 1.03682 [ 2.77959] ((15 . 39) (16 . 27) (17 . 2) (18 . 1) (19 . 23) (20 . 3) (21 . 24) (22 . 25) (24 . 38)) 3.759 {1/16:36} B:4 SIMILARITY (1/min{score1}): 0.9645 [and 1/min{score2}: 0.3598] [3751, 767]: Comparing 1lvl and 1d7y_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 41 (15 H + 26 S) secondary structure elements in 1d7y_A, of which 15 satisfy the size requirements. 1.28575 [ 2.14286] ((16 . 1) (17 . 2) (18 . 3) (20 . 8) (21 . 9) (22 . 10) (24 . 12)) 2.060 {0/12:21} B:0 1.80015 [ 3.00003] ((15 . 2) (16 . 3) (20 . 8) (21 . 9) (22 . 10)) 3.859 {0/6:10} B:0 2.25000 [ 3.75000] ((16 . 1) (17 . 2) (18 . 3) (20 . 8)) 1.808 {0/1:6} B:0 2.25012 [ 3.75003] ((15 . 2) (16 . 3) (18 . 8) (21 . 11)) 4.375 {0/3:6} B:0 2.25044 [ 3.75010] ((16 . 1) (17 . 2) (18 . 3) (24 . 9)) 6.023 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.8886 [and 1/min{score2}: 0.5333] [3751, 1092]: Comparing 1lvl and 1ebd_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 42 (16 H + 26 S) secondary structure elements in 1ebd_A, of which 10 satisfy the size requirements. 1.00006 [ 1.11116] ((15 . 18) (16 . 19) (17 . 20) (18 . 21) (19 . 22) (20 . 23) (21 . 24) (22 . 25) (24 . 27)) 2.012 {0/18:36} B:0 1.80034 [ 2.00024] ((15 . 20) (16 . 21) (17 . 22) (18 . 23) (21 . 26)) 4.758 {0/4:10} B:0 2.25010 [ 2.50007] ((17 . 18) (18 . 19) (19 . 20) (20 . 21)) 4.172 {0/0:6} B:0 2.25017 [ 2.50012] ((17 . 18) (18 . 19) (19 . 22) (21 . 24)) 4.739 {0/2:6} B:0 2.25051 [ 2.50037] ((17 . 18) (18 . 19) (19 . 20) (22 . 23)) 6.250 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.9999 [and 1/min{score2}: 0.9000] [3751, 1201]: Comparing 1lvl and 1el5_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 36 (13 H + 23 S) secondary structure elements in 1el5_A, of which 21 satisfy the size requirements. 1.12514 [ 2.62501] ((16 . 1) (17 . 2) (18 . 3) (19 . 13) (20 . 14) (21 . 15) (22 . 16) (24 . 18)) 2.686 {0/15:28} B:0 2.25059 [ 5.25005] ((16 . 1) (17 . 2) (18 . 3) (19 . 5)) 6.474 {0/1:6} B:0 2.25098 [ 5.25008] ((16 . 7) (17 . 8) (18 . 9) (19 . 10)) 7.356 {0/1:6} B:0 2.25125 [ 5.25010] ((17 . 5) (18 . 7) (19 . 8) (20 . 9)) 7.815 {0/3:6} B:0 2.25149 [ 5.25012] ((15 . 5) (16 . 7) (17 . 8) (18 . 9)) 8.170 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.9769 [and 1/min{score2}: 0.4282] [3751, 1439]: Comparing 1lvl and 1f8r_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 46 (23 H + 23 S) secondary structure elements in 1f8r_A, of which 29 satisfy the size requirements. 2.25002 [ 7.25000] ((19 . 22) (21 . 24) (22 . 25) (24 . 27)) 2.774 {0/3:6} B:0 2.25020 [ 7.25001] ((15 . 2) (16 . 3) (17 . 4) (18 . 5)) 4.972 {0/0:6} B:0 2.25054 [ 7.25002] ((16 . 24) (18 . 26) (19 . 28) (20 . 29)) 6.334 {0/2:6} B:0 2.25250 [ 7.25007] ((18 . 3) (19 . 4) (21 . 6) (22 . 7)) 9.303 {0/2:6} B:0 2.84042 [ 7.27575] ((17 . 20) (19 . 22) (20 . 25) (22 . 27)) 12.729 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.7649 [and 1/min{score2}: 0.3090] [3751, 1465]: Comparing 1lvl and 1fcd_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 35 (10 H + 25 S) secondary structure elements in 1fcd_A, of which 15 satisfy the size requirements. 1.80047 [ 3.00010] ((15 . 2) (16 . 3) (19 . 8) (20 . 9) (22 . 11)) 5.181 {0/5:10} B:0 2.25005 [ 3.75001] ((15 . 2) (16 . 3) (18 . 9) (21 . 12)) 3.477 {0/2:6} B:0 2.25037 [ 3.75008] ((15 . 2) (16 . 3) (19 . 8) (21 . 12)) 5.747 {0/2:6} B:0 2.25100 [ 3.75022] ((15 . 2) (16 . 3) (17 . 8) (20 . 13)) 7.399 {0/1:6} B:0 2.25207 [ 3.75045] ((16 . 1) (17 . 2) (18 . 3) (19 . 5)) 8.869 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.9992 [and 1/min{score2}: 0.5999] [3751, 1466]: Comparing 1lvl and 1fcd_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 35 (10 H + 25 S) secondary structure elements in 1fcd_A, of which 10 satisfy the size requirements. 1.02332 [ 1.12831] ((15 . 15) (16 . 16) (17 . 17) (18 . 18) (19 . 19) (20 . 20) (21 . 21) (22 . 22) (24 . 24)) 3.048 {1/18:36} B:0 1.12512 [ 1.25009] ((16 . 16) (17 . 17) (18 . 18) (19 . 19) (20 . 20) (21 . 21) (22 . 22) (24 . 24)) 2.600 {0/15:28} B:0 1.80035 [ 2.00026] ((15 . 17) (16 . 18) (17 . 19) (18 . 20) (21 . 23)) 4.815 {0/3:10} B:0 2.25007 [ 2.50005] ((17 . 15) (18 . 16) (19 . 17) (20 . 18)) 3.770 {0/1:6} B:0 2.25133 [ 2.50097] ((17 . 15) (18 . 16) (19 . 17) (24 . 20)) 7.935 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.9772 [and 1/min{score2}: 0.8863] [3751, 1478]: Comparing 1lvl and 1fec_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 43 (17 H + 26 S) secondary structure elements in 1fec_A, of which 16 satisfy the size requirements. 2.25037 [ 4.00007] ((16 . 1) (17 . 2) (18 . 3) (19 . 4)) 5.765 {0/1:6} B:0 2.26038 [ 4.00186] ((16 . 1) (17 . 2) (18 . 3) (19 . 5)) 13.292 {0/1:6} B:0 2.83706 [ 4.14489] ((15 . 2) (19 . 9) (22 . 10) (24 . 12)) 8.847 {1/4:6} B:0 3.49611 [ 4.41448] ((17 . 9) (20 . 13) (21 . 14) (22 . 15)) 11.941 {1/3:6} B:0 5.33598 [ 5.35952] ((16 . 1) (17 . 2) (18 . 3) (19 . 9) (20 . 10) (21 . 12) (22 . 13) (24 . 14)) 4.299 {8/15:28} B:0 SIMILARITY (1/min{score1}): 0.9985 [and 1/min{score2}: 0.5624] [3751, 1479]: Comparing 1lvl and 1fec_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 43 (17 H + 26 S) secondary structure elements in 1fec_A, of which 11 satisfy the size requirements. 1.00007 [ 1.22226] ((15 . 17) (16 . 18) (17 . 19) (18 . 20) (19 . 21) (20 . 22) (21 . 23) (22 . 24) (24 . 26)) 2.104 {0/18:36} B:0 1.80034 [ 2.20019] ((15 . 19) (16 . 20) (17 . 21) (18 . 22) (21 . 25)) 4.781 {0/4:10} B:0 1.80235 [ 2.20129] ((15 . 19) (16 . 20) (17 . 21) (18 . 22) (20 . 26)) 7.750 {0/1:10} B:0 2.25012 [ 2.75007] ((17 . 17) (18 . 18) (19 . 19) (20 . 20)) 4.341 {0/0:6} B:0 2.25112 [ 2.75062] ((17 . 17) (18 . 18) (19 . 19) (24 . 22)) 7.612 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.9999 [and 1/min{score2}: 0.8182] [3751, 1544]: Comparing 1lvl and 1fl2_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 28 (8 H + 20 S) secondary structure elements in 1fl2_A, of which 15 satisfy the size requirements. 1.12512 [ 1.87503] ((16 . 1) (17 . 2) (18 . 3) (19 . 7) (20 . 8) (21 . 9) (22 . 10) (24 . 12)) 2.593 {0/14:28} B:0 1.16829 [ 1.88483] ((16 . 1) (17 . 2) (18 . 3) (19 . 7) (20 . 8) (21 . 9) (22 . 10) (24 . 27)) 2.731 {1/14:28} B:0 1.28579 [ 2.14287] ((16 . 1) (17 . 2) (18 . 3) (19 . 7) (20 . 8) (21 . 9) (22 . 10)) 2.576 {0/10:21} B:0 1.28708 [ 2.14315] ((15 . 2) (16 . 3) (19 . 7) (20 . 8) (21 . 9) (22 . 10) (24 . 12)) 5.256 {0/11:21} B:0 1.80030 [ 3.00006] ((15 . 2) (16 . 3) (17 . 7) (18 . 8) (21 . 11)) 4.623 {0/3:10} B:0 SIMILARITY (1/min{score1}): 0.9992 [and 1/min{score2}: 0.5999] [3751, 1545]: Comparing 1lvl and 1fl2_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 28 (8 H + 20 S) secondary structure elements in 1fl2_A, of which 12 satisfy the size requirements. 1.00020 [ 1.33342] ((15 . 15) (16 . 16) (17 . 17) (18 . 18) (19 . 19) (20 . 20) (21 . 21) (22 . 22) (24 . 24)) 2.688 {0/17:36} B:0 1.12505 [ 1.50002] ((16 . 16) (17 . 17) (18 . 18) (19 . 19) (20 . 20) (21 . 21) (22 . 22) (24 . 24)) 2.095 {0/15:28} B:0 1.80020 [ 2.40008] ((15 . 17) (16 . 18) (17 . 19) (18 . 20) (21 . 23)) 4.179 {0/2:10} B:0 1.80090 [ 2.40038] ((16 . 16) (17 . 17) (18 . 18) (19 . 19) (24 . 25)) 6.085 {0/2:10} B:0 2.18246 [ 2.26131] ((16 . 16) (17 . 17) (18 . 18) (19 . 19) (20 . 20) (21 . 21) (22 . 23) (24 . 24)) 2.718 {3/14:28} B:0 SIMILARITY (1/min{score1}): 0.9998 [and 1/min{score2}: 0.7500] [3751, 1896]: Comparing 1lvl and 1gpe_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 52 (26 H + 26 S) secondary structure elements in 1gpe_A, of which 23 satisfy the size requirements. 2.25038 [ 5.75002] ((19 . 21) (20 . 22) (21 . 23) (22 . 24)) 5.822 {0/4:6} B:0 2.25186 [ 5.75011] ((17 . 21) (18 . 22) (20 . 26) (21 . 27)) 8.640 {0/3:6} B:0 2.25221 [ 5.75013] ((15 . 12) (16 . 14) (18 . 17) (22 . 19)) 9.017 {0/2:6} B:0 2.28711 [ 5.75228] ((15 . 18) (16 . 19) (21 . 25) (22 . 26)) 18.358 {0/4:6} B:0 2.33970 [ 3.13574] ((16 . 3) (17 . 4) (18 . 5) (19 . 21) (20 . 22) (21 . 23) (22 . 26) (24 . 27)) 4.217 {3/13:28} B:0 SIMILARITY (1/min{score1}): 0.6103 [and 1/min{score2}: 0.3613] [3751, 2112]: Comparing 1lvl and 1h6v_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 40 (18 H + 22 S) secondary structure elements in 1h6v_A, of which 15 satisfy the size requirements. 1.12547 [ 1.87510] ((16 . 1) (17 . 2) (18 . 3) (19 . 6) (20 . 7) (21 . 8) (22 . 9) (24 . 11)) 3.648 {0/14:28} B:0 2.25061 [ 3.75013] ((16 . 3) (19 . 6) (22 . 7) (24 . 9)) 6.543 {0/2:6} B:0 2.25127 [ 3.75027] ((15 . 2) (16 . 3) (17 . 4) (24 . 7)) 7.848 {0/0:6} B:0 2.25221 [ 3.75048] ((15 . 2) (16 . 3) (17 . 4) (19 . 6)) 9.018 {0/0:6} B:0 2.25837 [ 3.75182] ((16 . 1) (17 . 2) (18 . 3) (19 . 5)) 12.591 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.8885 [and 1/min{score2}: 0.5333] [3751, 2113]: Comparing 1lvl and 1h6v_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 40 (18 H + 22 S) secondary structure elements in 1h6v_A, of which 11 satisfy the size requirements. 1.00016 [ 1.22231] ((15 . 14) (16 . 15) (17 . 16) (18 . 17) (19 . 18) (20 . 19) (21 . 20) (22 . 21) (24 . 23)) 2.540 {0/18:36} B:0 1.12510 [ 1.37505] ((15 . 14) (16 . 15) (17 . 16) (18 . 17) (19 . 18) (20 . 19) (21 . 20) (22 . 21)) 2.460 {0/14:28} B:0 1.80025 [ 2.20014] ((15 . 16) (16 . 17) (17 . 18) (18 . 19) (21 . 22)) 4.427 {0/3:10} B:0 1.80041 [ 2.20022] ((15 . 13) (16 . 15) (17 . 16) (18 . 17) (19 . 18)) 5.000 {0/2:10} B:0 1.80129 [ 2.20070] ((15 . 13) (17 . 14) (18 . 15) (19 . 18) (21 . 20)) 6.660 {0/3:10} B:0 SIMILARITY (1/min{score1}): 0.9998 [and 1/min{score2}: 0.8181] [3751, 2128]: Comparing 1lvl and 1h7w_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 81 (45 H + 36 S) secondary structure elements in 1h7w_A, of which 13 satisfy the size requirements. 1.12559 [ 1.62520] ((15 . 25) (16 . 26) (17 . 27) (18 . 28) (19 . 30) (20 . 31) (21 . 32) (22 . 33)) 3.857 {0/14:28} B:0 1.71838 [ 1.86401] ((15 . 25) (16 . 26) (17 . 27) (18 . 28) (19 . 30) (20 . 31) (21 . 32) (22 . 35) (24 . 36)) 3.773 {3/18:36} B:0 1.80021 [ 2.60007] ((15 . 27) (16 . 28) (17 . 30) (18 . 31) (21 . 35)) 4.221 {0/2:10} B:0 2.18263 [ 2.30167] ((16 . 26) (17 . 27) (18 . 28) (19 . 30) (20 . 31) (21 . 34) (22 . 35) (24 . 36)) 4.726 {3/14:28} B:0 2.25006 [ 3.25002] ((16 . 28) (17 . 30) (18 . 31) (24 . 36)) 3.641 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.9810 [and 1/min{score2}: 0.6892] [3751, 2837]: Comparing 1lvl and 1jeh_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 40 (15 H + 25 S) secondary structure elements in 1jeh_A, of which 10 satisfy the size requirements. 1.00004 [ 1.11114] ((15 . 16) (16 . 17) (17 . 18) (18 . 19) (19 . 20) (20 . 21) (21 . 22) (22 . 23) (24 . 25)) 1.816 {0/19:36} B:0 1.12503 [ 1.25002] ((15 . 16) (16 . 17) (17 . 18) (18 . 19) (19 . 20) (20 . 21) (21 . 22) (22 . 23)) 1.801 {0/14:28} B:0 1.80033 [ 2.00024] ((15 . 18) (16 . 19) (17 . 20) (18 . 21) (21 . 24)) 4.753 {0/4:10} B:0 2.25011 [ 2.50008] ((17 . 16) (18 . 17) (19 . 18) (20 . 19)) 4.246 {0/0:6} B:0 2.25017 [ 2.50012] ((17 . 16) (18 . 17) (19 . 20) (21 . 22)) 4.742 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.9999 [and 1/min{score2}: 0.9000] [3751, 2994]: Comparing 1lvl and 1jnr_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 46 (25 H + 21 S) secondary structure elements in 1jnr_A, of which 19 satisfy the size requirements. 1.28585 [ 2.71430] ((16 . 3) (17 . 4) (18 . 5) (19 . 10) (21 . 13) (22 . 14) (24 . 16)) 2.941 {0/10:21} B:0 2.25113 [ 4.75012] ((17 . 8) (19 . 10) (21 . 13) (22 . 14)) 7.631 {0/3:6} B:0 2.25150 [ 4.75016] ((15 . 8) (19 . 10) (22 . 14) (24 . 16)) 8.183 {0/5:6} B:0 2.25218 [ 4.75023] ((15 . 10) (16 . 13) (18 . 15) (19 . 18)) 8.984 {0/2:6} B:0 2.25393 [ 4.75042] ((15 . 4) (16 . 5) (18 . 6) (19 . 8)) 10.416 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.8558 [and 1/min{score2}: 0.4202] [3751, 3060]: Comparing 1lvl and 1ju2_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 44 (17 H + 27 S) secondary structure elements in 1ju2_A, of which 25 satisfy the size requirements. 1.16839 [ 3.12714] ((16 . 5) (17 . 6) (18 . 7) (19 . 20) (20 . 21) (21 . 22) (22 . 23) (24 . 42)) 3.121 {1/14:28} B:0 2.25058 [ 6.25003] ((19 . 1) (20 . 2) (21 . 4) (24 . 7)) 6.438 {0/3:6} B:0 2.25174 [ 6.25008] ((17 . 20) (18 . 21) (20 . 24) (21 . 25)) 8.496 {0/3:6} B:0 2.25220 [ 6.25010] ((16 . 5) (17 . 6) (18 . 7) (20 . 12)) 9.005 {0/0:6} B:0 2.27007 [ 6.25095] ((15 . 16) (16 . 18) (17 . 20) (18 . 21)) 15.699 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.9988 [and 1/min{score2}: 0.3600] [3751, 3113]: Comparing 1lvl and 1k0i_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 38 (17 H + 21 S) secondary structure elements in 1k0i_A, of which 22 satisfy the size requirements. 1.80076 [ 4.40005] ((16 . 1) (17 . 2) (18 . 3) (19 . 6) (20 . 14)) 5.836 {0/3:10} B:0 2.25028 [ 5.50002] ((16 . 1) (17 . 2) (18 . 3) (19 . 6)) 5.387 {0/1:6} B:0 2.25109 [ 5.50007] ((15 . 2) (16 . 3) (17 . 6) (22 . 14)) 7.556 {0/1:6} B:0 2.25167 [ 5.50011] ((15 . 2) (16 . 3) (17 . 6) (24 . 14)) 8.410 {0/0:6} B:0 2.26269 [ 5.50088] ((15 . 6) (16 . 8) (22 . 16) (24 . 18)) 13.981 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.9768 [and 1/min{score2}: 0.4088] [3751, 3270]: Comparing 1lvl and 1kdg_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 46 (27 H + 19 S) secondary structure elements in 1kdg_A, of which 20 satisfy the size requirements. 2.25206 [ 5.00019] ((16 . 1) (17 . 2) (18 . 3) (19 . 5)) 8.855 {0/0:6} B:0 2.33967 [ 2.86554] ((16 . 1) (17 . 2) (18 . 3) (19 . 18) (20 . 19) (21 . 20) (22 . 23) (24 . 24)) 3.800 {3/13:28} B:0 2.83726 [ 5.07657] ((17 . 18) (20 . 21) (21 . 23) (22 . 24)) 9.259 {1/4:6} B:0 5.38718 [ 5.44611] ((16 . 1) (17 . 2) (18 . 3) (19 . 18) (20 . 19) (21 . 21) (22 . 23) (24 . 24)) 3.495 {7/13:28} B:0 10.00642 [10.15274] ((16 . 1) (17 . 2) (18 . 3) (19 . 6)) 8.521 {1/1:6} B:0 SIMILARITY (1/min{score1}): 0.8887 [and 1/min{score2}: 0.4000] [3751, 3702]: Comparing 1lvl and 1lqt_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 39 (19 H + 20 S) secondary structure elements in 1lqt_A, of which 19 satisfy the size requirements. 1.80349 [ 3.80037] ((15 . 19) (19 . 23) (20 . 24) (21 . 25) (22 . 26)) 8.556 {0/6:10} B:0 1.91194 [ 2.38260] ((15 . 11) (16 . 13) (17 . 14) (18 . 17) (19 . 19) (20 . 24) (21 . 25) (22 . 28) (24 . 29)) 3.797 {3/16:36} B:0 2.25016 [ 4.75002] ((15 . 12) (16 . 13) (17 . 14) (20 . 17)) 4.703 {0/0:6} B:0 2.25040 [ 4.75004] ((18 . 17) (19 . 19) (20 . 20) (24 . 24)) 5.885 {0/1:6} B:0 2.25041 [ 4.75004] ((15 . 19) (16 . 20) (17 . 23) (18 . 24)) 5.910 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.7917 [and 1/min{score2}: 0.4649] [3751, 3728]: Comparing 1lvl and 1ltx_R, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 42 (20 H + 22 S) secondary structure elements in 1ltx_R, of which 26 satisfy the size requirements. 1.16841 [ 3.25191] ((16 . 1) (17 . 2) (18 . 3) (19 . 25) (20 . 26) (21 . 27) (22 . 28) (24 . 30)) 3.194 {1/14:28} B:0 2.25014 [ 6.50001] ((18 . 1) (19 . 2) (20 . 3) (24 . 8)) 4.531 {0/1:6} B:0 2.25201 [ 6.50008] ((17 . 25) (18 . 26) (20 . 29) (21 . 30)) 8.803 {0/3:6} B:0 2.83769 [ 6.53541] ((17 . 25) (20 . 28) (21 . 29) (22 . 30)) 9.968 {1/4:6} B:0 10.00641 [10.41918] ((16 . 1) (17 . 2) (18 . 3) (19 . 6)) 7.741 {1/1:6} B:0 SIMILARITY (1/min{score1}): 0.9645 [and 1/min{score2}: 0.3460] [3751, 3751]: Comparing 1lvl and 1lvl, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. 1.00000 [ 1.00000] ((15 . 15) (16 . 16) (17 . 17) (18 . 18) (19 . 19) (20 . 20) (21 . 21) (22 . 22) (24 . 24)) 0.000 {0/20:36} B:0 2.25012 [ 2.25012] ((17 . 15) (18 . 16) (19 . 17) (20 . 18)) 4.314 {0/0:6} B:0 2.25012 [ 2.25012] ((15 . 17) (16 . 18) (17 . 19) (18 . 20)) 4.314 {0/0:6} B:0 2.25016 [ 2.25016] ((15 . 17) (16 . 18) (19 . 19) (21 . 21)) 4.646 {0/2:6} B:0 2.25016 [ 2.25016] ((17 . 15) (18 . 16) (19 . 19) (21 . 21)) 4.646 {0/2:6} B:0 SIMILARITY (1/min{score1}): 1.0000 [and 1/min{score2}: 1.0000] [3751, 3859]: Comparing 1lvl and 1m6i_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 46 (17 H + 29 S) secondary structure elements in 1m6i_A, of which 20 satisfy the size requirements. 1.56955 [ 3.34010] ((15 . 2) (16 . 3) (20 . 9) (21 . 10) (22 . 12) (24 . 14)) 4.501 {1/10:15} B:0 2.25090 [ 5.00008] ((16 . 1) (17 . 2) (18 . 3) (19 . 5)) 7.195 {0/1:6} B:0 2.25120 [ 5.00011] ((16 . 1) (17 . 2) (18 . 3) (19 . 4)) 7.732 {0/1:6} B:0 2.25159 [ 5.00014] ((17 . 2) (18 . 3) (19 . 5) (24 . 9)) 8.298 {0/1:6} B:0 2.25244 [ 5.00022] ((15 . 2) (16 . 3) (22 . 9) (24 . 12)) 9.239 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.8886 [and 1/min{score2}: 0.4000] [3751, 3860]: Comparing 1lvl and 1m6i_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 46 (17 H + 29 S) secondary structure elements in 1m6i_A, of which 15 satisfy the size requirements. 1.18203 [ 1.88815] ((16 . 20) (17 . 21) (18 . 22) (19 . 23) (20 . 24) (21 . 25) (22 . 26) (24 . 28)) 1.935 {1/13:28} B:0 1.30682 [ 1.76171] ((15 . 19) (16 . 20) (17 . 21) (18 . 22) (19 . 23) (20 . 24) (21 . 25) (22 . 26) (24 . 28)) 2.713 {2/17:36} B:0 1.80025 [ 3.00005] ((16 . 18) (17 . 19) (18 . 20) (19 . 21) (20 . 22)) 4.423 {0/2:10} B:0 1.80050 [ 3.00011] ((15 . 21) (16 . 22) (17 . 23) (18 . 24) (21 . 27)) 5.269 {0/4:10} B:0 2.25078 [ 3.75017] ((15 . 21) (16 . 22) (17 . 23) (20 . 27)) 6.943 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.8552 [and 1/min{score2}: 0.5676] [3751, 3989]: Comparing 1lvl and 1mo9_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 42 (17 H + 25 S) secondary structure elements in 1mo9_A, of which 17 satisfy the size requirements. 1.12578 [ 2.12512] ((16 . 4) (17 . 5) (18 . 6) (19 . 9) (20 . 10) (21 . 11) (22 . 12) (24 . 14)) 4.134 {0/12:28} B:0 2.25035 [ 4.25005] ((16 . 1) (17 . 2) (18 . 3) (19 . 5)) 5.688 {0/0:6} B:0 2.25046 [ 4.25007] ((18 . 1) (19 . 2) (20 . 3) (22 . 4)) 6.104 {0/2:6} B:0 2.25058 [ 4.25009] ((16 . 1) (17 . 2) (18 . 3) (22 . 6)) 6.447 {0/2:6} B:0 2.25066 [ 4.25010] ((15 . 5) (16 . 6) (19 . 9) (22 . 10)) 6.671 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.8883 [and 1/min{score2}: 0.4706] [3751, 3990]: Comparing 1lvl and 1mo9_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 42 (17 H + 25 S) secondary structure elements in 1mo9_A, of which 11 satisfy the size requirements. 1.00007 [ 1.22226] ((15 . 17) (16 . 18) (17 . 19) (18 . 20) (19 . 21) (20 . 22) (21 . 23) (22 . 24) (24 . 26)) 2.061 {0/17:36} B:0 1.12506 [ 1.37503] ((15 . 17) (16 . 18) (17 . 19) (18 . 20) (19 . 21) (20 . 22) (21 . 23) (22 . 24)) 2.167 {0/12:28} B:0 1.80040 [ 2.20022] ((15 . 19) (16 . 20) (17 . 21) (18 . 22) (21 . 25)) 4.986 {0/4:10} B:0 2.25114 [ 2.75063] ((15 . 21) (16 . 22) (18 . 24) (20 . 26)) 7.646 {0/1:6} B:0 2.37192 [ 2.39466] ((15 . 17) (16 . 18) (17 . 19) (18 . 20) (19 . 21) (20 . 22) (21 . 23) (22 . 25) (24 . 26)) 2.700 {4/17:36} B:0 SIMILARITY (1/min{score1}): 0.9999 [and 1/min{score2}: 0.8182] [3751, 4127]: Comparing 1lvl and 1n4w_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 35 (16 H + 19 S) secondary structure elements in 1n4w_A, of which 23 satisfy the size requirements. 1.12525 [ 2.87501] ((16 . 1) (17 . 2) (18 . 3) (19 . 17) (20 . 18) (21 . 19) (22 . 20) (24 . 22)) 3.108 {0/16:28} B:0 2.25154 [ 5.75009] ((15 . 17) (16 . 19) (18 . 21) (19 . 23)) 8.238 {0/2:6} B:0 2.25190 [ 5.75011] ((16 . 1) (17 . 2) (18 . 3) (24 . 7)) 8.682 {0/1:6} B:0 2.25465 [ 5.75028] ((15 . 11) (17 . 13) (18 . 14) (19 . 15)) 10.861 {0/2:6} B:0 2.28227 [ 5.75197] ((15 . 13) (16 . 14) (21 . 20) (22 . 21)) 17.714 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.9990 [and 1/min{score2}: 0.3913] [3751, 4213]: Comparing 1lvl and 1nek_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 47 (21 H + 26 S) secondary structure elements in 1nek_A, of which 23 satisfy the size requirements. 1.12529 [ 2.87502] ((16 . 2) (17 . 3) (18 . 4) (19 . 13) (20 . 14) (21 . 15) (22 . 16) (24 . 18)) 3.225 {0/16:28} B:0 2.25534 [ 5.75032] ((15 . 3) (16 . 4) (19 . 9) (22 . 11)) 11.248 {0/4:6} B:0 3.49466 [ 5.90597] ((17 . 8) (19 . 10) (21 . 11) (22 . 12)) 8.041 {1/3:6} B:0 3.49505 [ 5.90605] ((17 . 13) (20 . 16) (21 . 17) (22 . 18)) 9.611 {1/3:6} B:0 1.00173 [ 2.55566] ((15 . 38) (16 . 2) (17 . 3) (18 . 4) (19 . 13) (20 . 14) (21 . 15) (22 . 16) (24 . 18)) 4.617 {0/18:36} B:1 SIMILARITY (1/min{score1}): 0.9983 [and 1/min{score2}: 0.3913] [3751, 4237]: Comparing 1lvl and 1ng4_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 31 (13 H + 18 S) secondary structure elements in 1ng4_A, of which 21 satisfy the size requirements. 2.25078 [ 5.25006] ((16 . 8) (17 . 9) (18 . 10) (19 . 11)) 6.946 {0/1:6} B:0 2.25090 [ 5.25007] ((16 . 1) (17 . 2) (18 . 3) (19 . 6)) 7.196 {0/1:6} B:0 2.25229 [ 5.25018] ((15 . 13) (16 . 15) (18 . 18) (19 . 19)) 9.102 {0/2:6} B:0 2.25632 [ 5.25050] ((15 . 7) (16 . 8) (17 . 9) (18 . 10)) 11.732 {0/0:6} B:0 2.26618 [ 5.25129] ((16 . 8) (17 . 9) (18 . 10) (22 . 14)) 14.865 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.8632 [and 1/min{score2}: 0.3847] [3751, 4257]: Comparing 1lvl and 1nhp, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 40 (15 H + 25 S) secondary structure elements in 1nhp, of which 11 satisfy the size requirements. 1.16826 [ 1.39944] ((16 . 1) (17 . 2) (18 . 3) (19 . 6) (20 . 7) (21 . 8) (22 . 9) (24 . 11)) 2.556 {1/14:28} B:0 1.39001 [ 1.63226] ((16 . 1) (17 . 2) (18 . 3) (19 . 6) (20 . 7) (21 . 8) (22 . 9)) 2.340 {1/10:21} B:0 1.60210 [ 1.89232] ((16 . 3) (19 . 6) (20 . 7) (21 . 8) (22 . 9) (24 . 11)) 3.147 {1/9:15} B:0 1.80170 [ 2.20093] ((16 . 1) (17 . 2) (18 . 3) (19 . 6) (21 . 7)) 7.144 {0/1:10} B:0 1.80664 [ 2.20365] ((15 . 2) (16 . 3) (18 . 7) (21 . 10) (22 . 12)) 10.051 {0/3:10} B:0 SIMILARITY (1/min{score1}): 0.8560 [and 1/min{score2}: 0.7146] [3751, 4258]: Comparing 1lvl and 1nhp, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 40 (15 H + 25 S) secondary structure elements in 1nhp, of which 10 satisfy the size requirements. 1.01541 [ 1.12243] ((15 . 14) (16 . 15) (17 . 16) (18 . 17) (19 . 18) (20 . 19) (21 . 20) (22 . 21) (24 . 23)) 2.484 {1/20:36} B:0 1.12502 [ 1.25002] ((16 . 15) (17 . 16) (18 . 17) (19 . 18) (20 . 19) (21 . 20) (22 . 21) (24 . 23)) 1.677 {0/16:28} B:0 2.25009 [ 2.50006] ((17 . 14) (18 . 15) (19 . 16) (20 . 17)) 4.039 {0/1:6} B:0 2.25024 [ 2.50018] ((15 . 16) (16 . 17) (19 . 18) (21 . 22)) 5.188 {0/2:6} B:0 4.67060 [ 4.67266] ((16 . 15) (17 . 16) (18 . 17) (19 . 18) (20 . 19) (21 . 21) (22 . 22) (24 . 23)) 2.930 {7/15:28} B:0 SIMILARITY (1/min{score1}): 0.9848 [and 1/min{score2}: 0.8909] [3751, 4559]: Comparing 1lvl and 1o94_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 56 (28 H + 28 S) secondary structure elements in 1o94_A, of which 13 satisfy the size requirements. 1.00005 [ 1.44446] ((15 . 40) (16 . 41) (17 . 42) (18 . 43) (19 . 45) (20 . 46) (21 . 47) (22 . 48) (24 . 50)) 1.886 {0/20:36} B:0 1.12503 [ 1.62501] ((15 . 40) (16 . 41) (17 . 42) (18 . 43) (19 . 45) (20 . 46) (21 . 47) (22 . 48)) 1.819 {0/15:28} B:0 1.80027 [ 2.60009] ((15 . 42) (16 . 43) (17 . 45) (18 . 46) (21 . 49)) 4.496 {0/3:10} B:0 2.25021 [ 3.25007] ((17 . 40) (18 . 41) (19 . 42) (20 . 43)) 5.021 {0/0:6} B:0 2.25034 [ 3.25011] ((15 . 42) (16 . 43) (19 . 45) (21 . 47)) 5.639 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.9999 [and 1/min{score2}: 0.6923] [3751, 4680]: Comparing 1lvl and 1ojt, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 42 (17 H + 25 S) secondary structure elements in 1ojt, of which 12 satisfy the size requirements. 1.02302 [ 1.34328] ((15 . 16) (16 . 17) (17 . 18) (18 . 19) (19 . 20) (20 . 21) (21 . 22) (22 . 23) (24 . 25)) 1.464 {1/18:36} B:0 1.80035 [ 2.40015] ((15 . 18) (16 . 19) (17 . 20) (18 . 21) (21 . 24)) 4.813 {0/4:10} B:0 1.80205 [ 2.40087] ((15 . 18) (16 . 19) (17 . 20) (18 . 21) (20 . 25)) 7.486 {0/1:10} B:0 2.25012 [ 3.00005] ((17 . 16) (18 . 17) (19 . 18) (20 . 19)) 4.337 {0/0:6} B:0 2.25018 [ 3.00007] ((17 . 16) (18 . 17) (19 . 20) (21 . 22)) 4.786 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.9775 [and 1/min{score2}: 0.7444] [3751, 4728]: Comparing 1lvl and 1onf_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 36 (16 H + 20 S) secondary structure elements in 1onf_A, of which 11 satisfy the size requirements. 1.00002 [ 1.22223] ((15 . 11) (16 . 12) (17 . 13) (18 . 14) (19 . 15) (20 . 16) (21 . 17) (22 . 18) (24 . 20)) 1.452 {0/18:36} B:0 1.12501 [ 1.37500] ((16 . 12) (17 . 13) (18 . 14) (19 . 15) (20 . 16) (21 . 17) (22 . 18) (24 . 20)) 1.297 {0/16:28} B:0 1.80029 [ 2.20016] ((15 . 13) (16 . 14) (17 . 15) (18 . 16) (21 . 19)) 4.601 {0/4:10} B:0 1.80055 [ 2.20030] ((15 . 9) (16 . 12) (17 . 13) (18 . 14) (19 . 15)) 5.375 {0/2:10} B:0 1.80075 [ 2.20041] ((16 . 12) (17 . 13) (18 . 14) (19 . 15) (24 . 19)) 5.814 {0/2:10} B:0 SIMILARITY (1/min{score1}): 0.9999 [and 1/min{score2}: 0.8182] [3751, 5024]: Comparing 1lvl and 1pj5_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 74 (31 H + 43 S) secondary structure elements in 1pj5_A, of which 21 satisfy the size requirements. 1.12519 [ 2.62502] ((16 . 1) (17 . 2) (18 . 3) (19 . 17) (20 . 18) (21 . 19) (22 . 20) (24 . 22)) 2.915 {0/15:28} B:0 1.15847 [ 2.62775] ((16 . 1) (17 . 2) (18 . 3) (19 . 17) (20 . 18) (21 . 19) (22 . 20) (24 . 37)) 3.293 {1/15:28} B:0 2.25057 [ 5.25004] ((18 . 10) (19 . 11) (20 . 12) (24 . 16)) 6.411 {0/3:6} B:0 2.25060 [ 5.25005] ((16 . 1) (17 . 2) (18 . 3) (19 . 6)) 6.508 {0/1:6} B:0 2.25107 [ 5.25008] ((16 . 10) (17 . 11) (19 . 13) (21 . 16)) 7.513 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.8887 [and 1/min{score2}: 0.4178] [3751, 5057]: Comparing 1lvl and 1pn0_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 49 (20 H + 29 S) secondary structure elements in 1pn0_A, of which 22 satisfy the size requirements. 2.25041 [ 5.50003] ((16 . 2) (17 . 3) (18 . 4) (19 . 6)) 5.900 {0/1:6} B:0 2.25102 [ 5.50007] ((16 . 2) (17 . 3) (18 . 4) (19 . 7)) 7.433 {0/0:6} B:0 2.25229 [ 5.50016] ((15 . 14) (16 . 15) (21 . 18) (22 . 19)) 9.101 {0/3:6} B:0 2.25232 [ 5.50016] ((17 . 14) (18 . 15) (21 . 18) (22 . 19)) 9.130 {0/2:6} B:0 2.25240 [ 5.50016] ((15 . 3) (16 . 4) (17 . 6) (19 . 7)) 9.202 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.7775 [and 1/min{score2}: 0.3729] [3751, 5095]: Comparing 1lvl and 1ps9_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 52 (25 H + 27 S) secondary structure elements in 1ps9_A, of which 14 satisfy the size requirements. 1.01875 [ 1.56065] ((15 . 35) (16 . 36) (17 . 37) (18 . 41) (19 . 42) (20 . 43) (21 . 44) (22 . 45) (24 . 47)) 2.275 {1/19:36} B:0 2.25038 [ 3.50010] ((15 . 37) (18 . 41) (19 . 42) (21 . 44)) 5.789 {0/4:6} B:0 2.25045 [ 3.50012] ((15 . 35) (16 . 36) (17 . 37) (24 . 43)) 6.063 {0/0:6} B:0 2.25059 [ 3.50016] ((16 . 41) (18 . 43) (20 . 46) (21 . 47)) 6.478 {0/4:6} B:0 2.25086 [ 3.50023] ((17 . 35) (18 . 36) (19 . 37) (24 . 41)) 7.124 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.9816 [and 1/min{score2}: 0.6408] [3751, 5181]: Comparing 1lvl and 1q1r_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 41 (15 H + 26 S) secondary structure elements in 1q1r_A, of which 17 satisfy the size requirements. 1.12506 [ 2.12501] ((16 . 1) (17 . 2) (18 . 3) (19 . 6) (20 . 7) (21 . 8) (22 . 9) (24 . 11)) 2.204 {0/15:28} B:0 1.32579 [ 2.43478] ((15 . 2) (16 . 3) (19 . 6) (20 . 7) (21 . 8) (22 . 9) (24 . 11)) 4.605 {1/13:21} B:0 2.25040 [ 4.25006] ((15 . 2) (16 . 3) (17 . 6) (20 . 10)) 5.891 {0/2:6} B:0 2.25147 [ 4.25022] ((16 . 1) (17 . 2) (18 . 3) (19 . 4)) 8.135 {0/1:6} B:0 2.83630 [ 4.37194] ((19 . 27) (20 . 29) (21 . 31) (22 . 32)) 6.312 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.9996 [and 1/min{score2}: 0.5294] [3751, 5182]: Comparing 1lvl and 1q1r_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 41 (15 H + 26 S) secondary structure elements in 1q1r_A, of which 11 satisfy the size requirements. 1.02308 [ 1.23510] ((15 . 16) (16 . 17) (17 . 18) (18 . 19) (19 . 20) (20 . 21) (21 . 22) (22 . 23) (24 . 25)) 2.087 {1/18:36} B:0 1.12502 [ 1.37501] ((16 . 17) (17 . 18) (18 . 19) (19 . 20) (20 . 21) (21 . 22) (22 . 23) (24 . 25)) 1.562 {0/14:28} B:0 3.49446 [ 3.66628] ((18 . 15) (19 . 16) (20 . 17) (22 . 19)) 6.592 {1/3:6} B:0 5.71643 [ 5.71907] ((16 . 17) (17 . 18) (18 . 19) (19 . 20) (20 . 21) (21 . 23) (22 . 24) (24 . 25)) 2.525 {8/14:28} B:0 6.11221 [ 6.11356] ((15 . 16) (16 . 17) (17 . 18) (18 . 19) (19 . 20) (20 . 21) (21 . 23) (22 . 24) (24 . 25)) 2.941 {11/18:36} B:0 SIMILARITY (1/min{score1}): 0.9774 [and 1/min{score2}: 0.8097] [3751, 5262]: Comparing 1lvl and 1q9i_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 47 (25 H + 22 S) secondary structure elements in 1q9i_A, of which 25 satisfy the size requirements. 1.12517 [ 3.12501] ((16 . 10) (17 . 11) (18 . 12) (19 . 20) (20 . 21) (21 . 22) (22 . 23) (24 . 25)) 2.830 {0/15:28} B:0 1.15840 [ 3.12663] ((16 . 10) (17 . 11) (18 . 12) (19 . 20) (20 . 21) (21 . 22) (22 . 23) (24 . 45)) 3.046 {1/15:28} B:0 2.18249 [ 3.28503] ((16 . 10) (17 . 11) (18 . 12) (19 . 20) (20 . 21) (21 . 22) (22 . 24) (24 . 25)) 3.374 {3/14:28} B:0 2.25049 [ 6.25002] ((16 . 10) (17 . 11) (18 . 12) (19 . 13)) 6.197 {0/1:6} B:0 2.25076 [ 6.25004] ((17 . 16) (19 . 17) (21 . 18) (22 . 19)) 6.901 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.8888 [and 1/min{score2}: 0.3200] [3751, 5370]: Comparing 1lvl and 1qla_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 51 (25 H + 26 S) secondary structure elements in 1qla_A, of which 21 satisfy the size requirements. 1.80012 [ 4.20001] ((19 . 15) (20 . 16) (21 . 17) (22 . 18) (24 . 20)) 3.656 {0/7:10} B:0 2.25031 [ 5.25002] ((16 . 1) (18 . 2) (19 . 3) (20 . 4)) 5.531 {0/1:6} B:0 2.25249 [ 5.25020] ((15 . 15) (16 . 17) (18 . 20) (19 . 22)) 9.290 {0/2:6} B:0 2.52528 [ 3.05008] ((16 . 2) (17 . 3) (18 . 4) (19 . 15) (20 . 16) (21 . 17) (22 . 19) (24 . 20)) 3.384 {4/16:28} B:0 2.83617 [ 5.31624] ((17 . 15) (21 . 17) (22 . 19) (24 . 20)) 5.342 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.8880 [and 1/min{score2}: 0.3809] [3751, 5760]: Comparing 1lvl and 1s3e_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 44 (23 H + 21 S) secondary structure elements in 1s3e_A, of which 27 satisfy the size requirements. 1.80002 [ 5.40000] ((16 . 1) (17 . 2) (18 . 3) (19 . 19) (24 . 24)) 2.304 {0/2:10} B:0 2.25002 [ 6.75000] ((19 . 19) (21 . 21) (22 . 22) (24 . 24)) 2.844 {0/3:6} B:0 2.25020 [ 6.75001] ((16 . 1) (17 . 2) (18 . 3) (19 . 7)) 4.937 {0/1:6} B:0 2.83657 [ 6.78157] ((19 . 7) (20 . 8) (21 . 9) (22 . 10)) 7.515 {1/4:6} B:0 2.84147 [ 6.78193] ((17 . 17) (19 . 19) (20 . 22) (22 . 24)) 13.435 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.5819 [and 1/min{score2}: 0.3258] [3751, 5803]: Comparing 1lvl and 1sez_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 43 (22 H + 21 S) secondary structure elements in 1sez_A, of which 24 satisfy the size requirements. 1.80001 [ 4.80000] ((16 . 1) (17 . 2) (18 . 3) (19 . 21) (24 . 26)) 1.955 {0/2:10} B:0 1.81717 [ 4.80092] ((17 . 19) (19 . 21) (21 . 23) (22 . 24) (24 . 26)) 12.774 {0/5:10} B:0 2.25027 [ 6.00001] ((16 . 1) (17 . 2) (18 . 3) (19 . 6)) 5.322 {0/1:6} B:0 2.25032 [ 6.00002] ((19 . 21) (21 . 23) (22 . 26) (24 . 42)) 5.546 {0/1:6} B:0 2.25272 [ 6.00014] ((18 . 1) (19 . 2) (21 . 4) (22 . 5)) 9.501 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.6452 [and 1/min{score2}: 0.3292] [3751, 5930]: Comparing 1lvl and 1trb, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 31 (10 H + 21 S) secondary structure elements in 1trb, of which 12 satisfy the size requirements. 1.12514 [ 1.50006] ((16 . 2) (17 . 3) (18 . 4) (19 . 6) (20 . 7) (21 . 8) (22 . 9) (24 . 11)) 2.685 {0/16:28} B:0 1.34027 [ 1.73830] ((15 . 3) (16 . 4) (19 . 6) (20 . 7) (21 . 8) (22 . 9) (24 . 11)) 5.283 {1/12:21} B:0 1.80146 [ 2.40062] ((16 . 2) (17 . 3) (18 . 4) (19 . 6) (21 . 7)) 6.874 {0/3:10} B:0 1.92259 [ 2.10319] ((16 . 2) (17 . 3) (18 . 4) (19 . 6) (20 . 7) (21 . 10) (24 . 11)) 3.421 {2/11:21} B:0 2.25053 [ 3.00022] ((15 . 3) (16 . 4) (19 . 6) (21 . 10)) 6.309 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.8888 [and 1/min{score2}: 0.6666] [3751, 5931]: Comparing 1lvl and 1trb, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 31 (10 H + 21 S) secondary structure elements in 1trb, of which 11 satisfy the size requirements. 1.00056 [ 1.22253] ((15 . 15) (16 . 16) (17 . 17) (18 . 18) (19 . 19) (20 . 20) (21 . 21) (22 . 22) (24 . 24)) 3.488 {0/18:36} B:0 1.12507 [ 1.37504] ((16 . 16) (17 . 17) (18 . 18) (19 . 19) (20 . 20) (21 . 21) (22 . 22) (24 . 24)) 2.256 {0/16:28} B:0 1.80040 [ 2.20022] ((15 . 13) (16 . 16) (17 . 17) (18 . 18) (19 . 19)) 4.974 {0/2:10} B:0 2.04832 [ 2.10344] ((16 . 16) (17 . 17) (18 . 18) (19 . 19) (20 . 20) (21 . 21) (22 . 23) (24 . 24)) 3.014 {3/15:28} B:0 2.25005 [ 2.75003] ((17 . 15) (18 . 16) (19 . 17) (20 . 18)) 3.568 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.9994 [and 1/min{score2}: 0.8180] [3751, 6209]: Comparing 1lvl and 1vdc, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 31 (10 H + 21 S) secondary structure elements in 1vdc, of which 11 satisfy the size requirements. 1.00016 [ 1.22231] ((15 . 16) (16 . 18) (17 . 19) (18 . 20) (19 . 21) (20 . 22) (21 . 23) (22 . 24) (24 . 26)) 2.560 {0/17:36} B:0 1.12507 [ 1.37504] ((16 . 18) (17 . 19) (18 . 20) (19 . 21) (20 . 22) (21 . 23) (22 . 24) (24 . 26)) 2.282 {0/16:28} B:0 1.28577 [ 1.57146] ((16 . 18) (17 . 19) (18 . 20) (19 . 21) (20 . 22) (21 . 23) (22 . 24)) 2.311 {0/12:21} B:0 1.91186 [ 1.95448] ((15 . 16) (16 . 18) (17 . 19) (18 . 20) (19 . 21) (20 . 22) (21 . 23) (22 . 25) (24 . 26)) 2.892 {3/16:36} B:0 2.25009 [ 2.75005] ((17 . 16) (18 . 18) (19 . 19) (20 . 20)) 4.024 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.9998 [and 1/min{score2}: 0.8181] [3751, 6572]: Comparing 1lvl and 3grs, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 41 (18 H + 23 S) secondary structure elements in 3grs, of which 11 satisfy the size requirements. 2.25015 [ 2.75008] ((19 . 8) (20 . 9) (22 . 11) (24 . 13)) 4.587 {0/5:6} B:0 2.25037 [ 2.75020] ((16 . 2) (17 . 3) (18 . 4) (19 . 5)) 5.753 {0/1:6} B:0 2.25065 [ 2.75036] ((19 . 8) (20 . 9) (22 . 11) (24 . 14)) 6.643 {0/5:6} B:0 2.25154 [ 2.75085] ((15 . 3) (16 . 4) (19 . 8) (24 . 11)) 8.243 {0/1:6} B:0 2.25526 [ 2.75289] ((19 . 8) (21 . 9) (22 . 11) (24 . 12)) 11.207 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.6767 [and 1/min{score2}: 0.6206] [3751, 6573]: Comparing 1lvl and 3grs, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 41 (18 H + 23 S) secondary structure elements in 3grs, of which 11 satisfy the size requirements. 1.00003 [ 1.22224] ((15 . 16) (16 . 17) (17 . 18) (18 . 19) (19 . 20) (20 . 21) (21 . 22) (22 . 23) (24 . 25)) 1.626 {0/19:36} B:0 1.12502 [ 1.37501] ((16 . 17) (17 . 18) (18 . 19) (19 . 20) (20 . 21) (21 . 22) (22 . 23) (24 . 25)) 1.563 {0/15:28} B:0 1.12502 [ 1.37501] ((15 . 16) (16 . 17) (17 . 18) (18 . 19) (19 . 20) (20 . 21) (21 . 22) (22 . 23)) 1.656 {0/14:28} B:0 1.80034 [ 2.20018] ((15 . 18) (16 . 19) (17 . 20) (18 . 21) (21 . 24)) 4.763 {0/4:10} B:0 1.80038 [ 2.20021] ((15 . 18) (16 . 19) (17 . 20) (18 . 21) (24 . 25)) 4.922 {0/1:10} B:0 SIMILARITY (1/min{score1}): 0.9999 [and 1/min{score2}: 0.8182] [3751, 6576]: Comparing 1lvl and 3lad_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 41 (16 H + 25 S) secondary structure elements in 3lad_A, of which 15 satisfy the size requirements. 1.12562 [ 1.87513] ((16 . 1) (17 . 2) (18 . 3) (19 . 9) (20 . 10) (21 . 11) (22 . 12) (24 . 14)) 3.903 {0/15:28} B:0 2.25033 [ 3.75007] ((16 . 1) (17 . 2) (18 . 3) (19 . 4)) 5.623 {0/1:6} B:0 2.25144 [ 3.75031] ((15 . 2) (16 . 3) (19 . 9) (24 . 12)) 8.096 {0/1:6} B:0 2.25220 [ 3.75048] ((15 . 2) (16 . 3) (17 . 4) (19 . 9)) 9.007 {0/0:6} B:0 2.25557 [ 3.75121] ((16 . 1) (17 . 2) (18 . 3) (19 . 5)) 11.365 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.9985 [and 1/min{score2}: 0.5999] [3751, 6577]: Comparing 1lvl and 3lad_A, based on their crossing files. There are 42 (16 H + 26 S) secondary structure elements in 1lvl, of which 9 satisfy the size requirements. There are 41 (16 H + 25 S) secondary structure elements in 3lad_A, of which 11 satisfy the size requirements. 1.00002 [ 1.22223] ((15 . 17) (16 . 18) (17 . 19) (18 . 20) (19 . 21) (20 . 22) (21 . 23) (22 . 24) (24 . 26)) 1.557 {0/20:36} B:0 1.80037 [ 2.20020] ((15 . 19) (16 . 20) (17 . 21) (18 . 22) (21 . 25)) 4.865 {0/3:10} B:0 1.80061 [ 2.20033] ((16 . 16) (17 . 17) (18 . 18) (19 . 21) (21 . 23)) 5.521 {0/3:10} B:0 1.80137 [ 2.20075] ((15 . 17) (17 . 19) (18 . 20) (19 . 21) (21 . 22)) 6.767 {0/3:10} B:0 2.25012 [ 2.75007] ((17 . 17) (18 . 18) (19 . 19) (20 . 20)) 4.385 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.9999 [and 1/min{score2}: 0.8182] -------------------------------------------------------------------------------------------------------------------------