------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 1700 1g2i_A) ( 6 1a04_A) 0.5501 0.6084 4.3361 ( 3 20 36) 0 0.5501 0.6384 14 11 ( 1700 1g2i_A) ( 26 1a2o_A) 0.6128 0.7759 4.6758 ( 2 19 36) 0 0.6129 0.7998 14 10 ( 1700 1g2i_A) ( 90 1a9x_B) 0.7122 0.5550 6.4113 ( 1 27 45) 0 0.7122 0.5550 14 18 ( 1700 1g2i_A) ( 256 1b00_A) 0.6177 0.7922 5.5630 ( 2 20 36) 0 0.6177 0.7998 14 10 ( 1700 1g2i_A) ( 266 1b1c_A) 0.6066 0.7180 4.7876 ( 2 18 36) 0 0.6066 0.7180 14 11 ( 1700 1g2i_A) ( 428 1bmt_A) 0.6179 0.7454 4.6363 ( 2 20 36) 0 0.6179 0.7454 14 11 ( 1700 1g2i_A) ( 477 1bvy_F) 0.6219 0.8600 4.4241 ( 2 21 36) 0 0.6219 0.8727 14 9 ( 1700 1g2i_A) ( 523 1c4k_A) 0.3671 0.3957 5.6293 ( 2 8 21) 0 0.4998 0.8723 14 8 ( 1700 1g2i_A) ( 562 1ccw_A) 0.4918 0.5601 3.5404 ( 3 18 28) 0 0.5212 0.6633 14 10 ( 1700 1g2i_A) ( 745 1d4a_A) 0.4250 0.3975 4.0048 ( 1 10 15) 0 0.6491 0.6180 14 15 ( 1700 1g2i_A) ( 786 1dbw_A) 0.6393 0.8814 5.4362 ( 1 17 36) 0 0.6427 0.8992 14 10 ( 1700 1g2i_A) ( 793 1dcf_A) 0.4788 0.5107 4.7222 ( 4 21 36) 0 0.5662 0.7734 14 10 ( 1700 1g2i_A) ( 971 1dxy ) 0.4285 0.6664 4.7623 ( 0 6 15) 0 0.5714 0.8882 14 9 ( 1700 1g2i_A) ( 980 1dz3_A) 0.5684 0.7842 4.3571 ( 1 15 28) 0 0.6375 0.8726 14 10 ( 1700 1g2i_A) ( 1042 1e5d_A) 0.5661 0.7732 4.6280 ( 1 13 28) 0 0.5661 0.7732 14 10 ( 1700 1g2i_A) ( 1177 1eiw_A) 0.4784 0.5453 4.5044 ( 3 17 28) 0 0.4962 0.7460 14 9 ( 1700 1g2i_A) ( 1252 1es9_A) 0.5713 0.6665 4.3056 ( 0 10 28) 0 0.5722 0.6665 14 12 ( 1700 1g2i_A) ( 1253 1esc ) 0.5713 0.4706 4.3173 ( 0 14 28) 0 0.5713 0.4706 14 17 ( 1700 1g2i_A) ( 1266 1euc_B) 0.4455 0.4668 4.2929 ( 2 10 28) 0 0.6740 0.7550 14 12 ( 1700 1g2i_A) ( 1379 1f2v_A) 0.4281 0.3748 9.4210 ( 0 9 15) 0 0.7117 0.6249 14 16 ( 1700 1g2i_A) ( 1397 1f4p_A) 0.6394 0.9703 4.8273 ( 1 17 36) 0 0.6394 0.9703 14 9 ( 1700 1g2i_A) ( 1443 1f8y_A) 0.5674 0.7142 4.9903 ( 1 14 28) 0 0.5674 0.7142 14 11 ( 1700 1g2i_A) ( 1516 1fjg_B) 0.3158 0.3430 6.8830 ( 1 4 10) 0 0.5714 0.6665 14 12 ( 1700 1g2i_A) ( 1547 1flc_A) 0.3317 0.3085 4.3207 ( 2 7 21) 0 0.6218 0.4937 14 18 ( 1700 1g2i_A) ( 1659 1fye_A) 0.4261 0.3326 4.5060 ( 1 11 15) 0 0.7352 0.5952 14 18 ( 1700 1g2i_A) ( 1662 1fyx_A) 0.4979 0.6892 4.7209 ( 1 14 21) 0 0.4979 0.6892 14 10 ( 1700 1g2i_A) ( 1700 1g2i_A) 1.0000 1.0000 0.0000 ( 0 72 91) 0 1.0000 1.0000 14 14 ( 1700 1g2i_A) ( 1803 1gdh_A) 0.5613 0.7516 4.9912 ( 1 11 28) 0 0.5642 0.7641 14 10 ( 1700 1g2i_A) ( 1901 1gpm_A) 0.7137 0.6247 2.6686 ( 1 30 45) 0 0.7137 0.6247 14 16 ( 1700 1g2i_A) ( 2027 1h05_A) 0.5035 0.5381 3.3053 ( 3 17 36) 0 0.5035 0.5449 14 11 ( 1700 1g2i_A) ( 2427 1i7q_B) 0.7026 0.5521 3.3799 ( 2 28 45) 0 0.7026 0.5521 14 18 ( 1700 1g2i_A) ( 2470 1iex_A) 0.3571 0.4166 6.5016 ( 0 4 10) 0 0.5210 0.5831 14 12 ( 1700 1g2i_A) ( 2714 1j2y_A) 0.4788 0.5048 4.3494 ( 4 21 36) 0 0.5713 0.7268 14 11 ( 1700 1g2i_A) ( 2729 1j4a_A) 0.3571 0.4999 4.6782 ( 0 5 10) 0 0.4455 0.5999 14 10 ( 1700 1g2i_A) ( 2809 1jbe_A) 0.3790 0.3940 3.5909 ( 3 12 28) 0 0.6061 0.7995 14 10 ( 1700 1g2i_A) ( 3034 1jrl_A) 0.4924 0.6630 5.0517 ( 1 10 21) 0 0.4924 0.6630 14 10 ( 1700 1g2i_A) ( 3073 1jvn_A) 0.7064 0.5246 3.1340 ( 2 31 45) 0 0.7064 0.5612 14 19 ( 1700 1g2i_A) ( 3189 1k66_A) 0.5714 0.7272 3.3154 ( 0 13 28) 0 0.6428 0.8179 14 11 ( 1700 1g2i_A) ( 3190 1k68_A) 0.5714 0.7999 2.9768 ( 0 13 28) 0 0.6428 0.8998 14 10 ( 1700 1g2i_A) ( 3199 1k7c_A) 0.3671 0.3591 6.0783 ( 3 12 21) 0 0.4283 0.4061 14 15 ( 1700 1g2i_A) ( 3234 1k9v_F) 0.7136 0.5554 3.0427 ( 1 29 45) 0 0.7136 0.5554 14 18 ( 1700 1g2i_A) ( 3238 1ka9_H) 0.7052 0.6203 4.1112 ( 2 30 45) 0 0.7052 0.6203 14 16 ( 1700 1g2i_A) ( 3295 1kgs_A) 0.4887 0.6472 5.1798 ( 1 9 21) 0 0.6357 0.8644 14 10 ( 1700 1g2i_A) ( 3412 1krw_A) 0.6395 0.8823 4.4553 ( 1 17 36) 0 0.7109 0.9825 14 10 ( 1700 1g2i_A) ( 3462 1kwg_A) 0.6963 0.6155 3.5078 ( 2 25 45) 0 0.6963 0.6155 14 16 ( 1700 1g2i_A) ( 3560 1l7d_A) 0.3571 0.2941 6.1510 ( 0 5 10) 0 0.5035 0.4595 14 17 ( 1700 1g2i_A) ( 3581 1l9x_A) 0.6193 0.4552 4.9179 ( 5 35 55) 0 0.8332 0.5255 14 23 ( 1700 1g2i_A) ( 3632 1li4_A) 0.5458 0.5015 4.3470 ( 6 35 55) 0 0.6826 0.5981 14 18 ( 1700 1g2i_A) ( 3801 1m2e_A) 0.5000 0.7776 3.7593 ( 0 10 21) 0 0.5682 0.8613 14 9 ( 1700 1g2i_A) ( 3896 1mb3_A) 0.6401 0.8855 4.5819 ( 1 18 36) 0 0.6402 0.8861 14 10 ( 1700 1g2i_A) ( 4066 1mx3_A) 0.3571 0.4545 3.7154 ( 0 6 10) 0 0.5570 0.6834 14 11 ( 1700 1g2i_A) ( 4130 1n57_A) 0.7532 0.6012 2.3024 ( 3 36 55) 0 0.7848 0.6108 14 18 ( 1700 1g2i_A) ( 4185 1nat ) 0.6427 0.8991 4.4461 ( 0 14 36) 0 0.6427 0.8991 14 10 ( 1700 1g2i_A) ( 4323 1nni_1) 0.6427 0.8175 4.6362 ( 0 21 36) 0 0.6427 0.8175 14 11 ( 1700 1g2i_A) ( 4433 1ny5_A) 0.5616 0.6467 6.6292 ( 2 14 36) 0 0.6413 0.8918 14 10 ( 1700 1g2i_A) ( 4474 1o1y_A) 0.6691 0.5153 2.9104 ( 3 29 45) 0 0.6691 0.5153 14 19 ( 1700 1g2i_A) ( 4590 1obo_A) 0.6179 0.7930 4.2151 ( 2 20 36) 0 0.6179 0.7930 14 10 ( 1700 1g2i_A) ( 4669 1oi7_A) 0.3571 0.4545 5.1511 ( 0 2 10) 0 0.6385 0.8040 14 11 ( 1700 1g2i_A) ( 4787 1ou0_A) 0.3467 0.2900 7.5148 ( 1 6 10) 0 0.5434 0.5093 14 17 ( 1700 1g2i_A) ( 4813 1oxb_B) 0.5000 0.7000 2.5545 ( 0 10 21) 0 0.6065 0.7998 14 10 ( 1700 1g2i_A) ( 4871 1p2f_A) 0.5314 0.6499 3.6780 ( 2 15 28) 0 0.5989 0.7341 14 10 ( 1700 1g2i_A) ( 4905 1p5f_A) 0.8338 0.8338 1.6857 ( 3 44 66) 0 0.8338 0.8338 14 14 ( 1700 1g2i_A) ( 4916 1p6u_A) 0.6413 0.8919 5.4752 ( 1 22 36) 0 0.6427 0.8990 14 10 ( 1700 1g2i_A) ( 4926 1p80_A) 0.8542 0.9188 2.0853 ( 2 50 66) 0 0.8542 0.9188 14 13 ( 1700 1g2i_A) ( 5096 1psd_A) 0.4999 0.7765 5.8406 ( 0 4 21) 0 0.4999 0.7772 14 9 ( 1700 1g2i_A) ( 5234 1q7r_A) 0.6632 0.5393 4.9044 ( 3 28 45) 0 0.6632 0.5393 14 18 ( 1700 1g2i_A) ( 5289 1qcz_A) 0.5000 0.6998 4.0051 ( 0 10 21) 0 0.6395 0.8824 14 10 ( 1700 1g2i_A) ( 5297 1qdl_B) 0.6988 0.5822 2.9120 ( 2 26 45) 0 0.6988 0.5822 14 17 ( 1700 1g2i_A) ( 5364 1qkk_A) 0.5032 0.5459 7.1497 ( 3 17 36) 0 0.5781 0.7957 14 10 ( 1700 1g2i_A) ( 5397 1qo0_D) 0.4980 0.5790 11.4501 ( 0 10 21) 0 0.5196 0.5790 14 12 ( 1700 1g2i_A) ( 5470 1qvz_A) 0.8338 0.7377 2.2847 ( 3 44 66) 0 0.8338 0.7377 14 16 ( 1700 1g2i_A) ( 5673 1rli_A) 0.7129 0.8304 5.4493 ( 1 28 45) 0 0.7129 0.8304 14 12 ( 1700 1g2i_A) ( 5752 1s2d_A) 0.4204 0.4806 4.6889 ( 2 10 21) 0 0.5212 0.6956 14 9 ( 1700 1g2i_A) ( 5785 1say_A) 0.3571 0.2632 5.1806 ( 0 6 10) 0 0.6633 0.5137 14 19 ( 1700 1g2i_A) ( 5842 1sqs_A) 0.4962 0.4962 4.9858 ( 1 12 21) 0 0.6408 0.6408 14 14 ( 1700 1g2i_A) ( 5920 1tmy ) 0.6401 0.8855 4.5850 ( 1 18 36) 0 0.6402 0.8860 14 10 ( 1700 1g2i_A) ( 6242 1vhq_A) 0.8530 0.8530 1.9010 ( 2 46 66) 0 0.8530 0.8530 14 14 ( 1700 1g2i_A) ( 6258 1vi6_A) 0.4710 0.4861 4.5852 ( 2 11 28) 0 0.4710 0.4861 14 13 ( 1700 1g2i_A) ( 6283 1vjg_A) 0.4999 0.5832 4.6453 ( 0 11 21) 0 0.5888 0.6662 14 12 ( 1700 1g2i_A) ( 6496 2nac_A) 0.3570 0.3843 9.6523 ( 0 0 10) 0 0.6356 0.6819 14 13 ( 1700 1g2i_A) ( 6624 5nul ) 0.6392 0.8813 5.5115 ( 1 17 36) 0 0.6392 0.8813 14 10 ( 1700 1g2i_A) ( 6640 7req_A) 0.3571 0.4167 3.7655 ( 0 5 10) 0 0.5714 0.6665 14 12 ( 1700 1g2i_A) ( 6642 7req_B) 0.3571 0.3846 4.2259 ( 0 3 10) 0 0.4204 0.4351 14 13 -------------------------------------------------------------------------------------------------------------------------