------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 781 1db3_A) ( 42 1a4i_A) 0.2727 0.5997 5.5357 ( 0 2 15) 0 0.3636 0.7998 22 10 ( 781 1db3_A) ( 265 1b16_A) 0.5909 0.8124 2.5593 ( 0 42 78) 0 0.5909 0.8124 22 16 ( 781 1db3_A) ( 312 1b7g_O) 0.4091 0.6922 3.6998 ( 0 16 36) 0 0.4998 0.8437 22 13 ( 781 1db3_A) ( 319 1b8p_A) 0.4543 0.9025 4.7294 ( 1 23 45) 0 0.4996 0.9873 22 11 ( 781 1db3_A) ( 352 1bdb ) 0.5908 0.7220 3.3517 ( 1 44 78) 0 0.5908 0.7220 22 18 ( 781 1db3_A) ( 377 1bg6 ) 0.3078 0.3142 4.6879 ( 10 32 55) 0 0.4089 0.4994 22 18 ( 781 1db3_A) ( 506 1c1d_A) 0.2727 0.4998 6.1729 ( 0 6 15) 0 0.3802 0.6659 22 12 ( 781 1db3_A) ( 707 1cyd_A) 0.5909 0.7222 2.7256 ( 0 35 78) 0 0.6243 0.7466 22 18 ( 781 1db3_A) ( 781 1db3_A) 1.0000 1.0000 0.0000 ( 0 185 231) 0 1.0000 1.0000 22 22 ( 781 1db3_A) ( 847 1dih ) 0.3182 0.9990 4.0364 ( 0 6 21) 0 0.3182 0.9990 22 7 ( 781 1db3_A) ( 873 1dlj_A) 0.3317 0.3443 4.7973 ( 10 35 55) 0 0.4885 0.6380 22 16 ( 781 1db3_A) ( 906 1dpg_A) 0.4999 0.8445 4.0907 ( 1 31 55) 0 0.4999 0.8448 22 13 ( 781 1db3_A) ( 972 1dxy ) 0.3169 0.4316 3.6264 ( 1 9 21) 0 0.5452 0.7487 22 16 ( 781 1db3_A) ( 1053 1e6u_A) 0.7673 0.7673 3.7621 ( 5 95 136) 0 0.7718 0.7718 22 22 ( 781 1db3_A) ( 1071 1e7w_A) 0.5909 0.7646 2.7885 ( 0 41 78) 0 0.6287 0.7970 22 17 ( 781 1db3_A) ( 1094 1ebf_A) 0.4536 0.8139 4.7070 ( 1 15 45) 0 0.4537 0.8167 22 12 ( 781 1db3_A) ( 1117 1edz_A) 0.2727 0.5000 4.5173 ( 0 4 15) 0 0.4091 0.7496 22 12 ( 781 1db3_A) ( 1189 1ek6_A) 0.8175 0.8175 3.4571 ( 3 111 153) 0 0.8591 0.8591 22 22 ( 781 1db3_A) ( 1219 1enp ) 0.5908 0.7221 2.8896 ( 1 45 78) 0 0.6226 0.7426 22 18 ( 781 1db3_A) ( 1221 1eny ) 0.5908 0.7645 2.8628 ( 1 45 78) 0 0.6226 0.7779 22 17 ( 781 1db3_A) ( 1242 1eq2_A) 0.7550 0.7550 3.3801 ( 7 97 136) 0 0.7623 0.7623 22 22 ( 781 1db3_A) ( 1355 1f14_A) 0.2838 0.2899 4.2093 ( 12 35 55) 0 0.4544 0.6654 22 15 ( 781 1db3_A) ( 1436 1f8f_A) 0.3182 0.5000 3.2048 ( 0 8 21) 0 0.5000 0.7856 22 14 ( 781 1db3_A) ( 1487 1ff9_A) 0.5907 0.8650 4.9282 ( 1 39 78) 0 0.5907 0.8650 22 15 ( 781 1db3_A) ( 1531 1fjh_A) 0.5000 0.6874 3.3277 ( 0 25 55) 0 0.5702 0.7285 22 16 ( 781 1db3_A) ( 1560 1fmc_A) 0.5908 0.7643 2.7214 ( 1 37 78) 0 0.5908 0.7643 22 17 ( 781 1db3_A) ( 1804 1gdh_A) 0.2727 0.4286 3.7652 ( 0 5 15) 0 0.5432 0.8368 22 14 ( 781 1db3_A) ( 1807 1gee_A) 0.5908 0.6499 2.4560 ( 1 41 78) 0 0.5908 0.6499 22 20 ( 781 1db3_A) ( 1809 1geg_A) 0.5909 0.7646 2.7454 ( 0 39 78) 0 0.6352 0.8192 22 17 ( 781 1db3_A) ( 1899 1gpj_A) 0.2727 0.4998 6.2401 ( 0 4 15) 0 0.4545 0.8329 22 12 ( 781 1db3_A) ( 1922 1gr0_A) 0.5000 0.7852 4.4974 ( 0 24 55) 0 0.5000 0.7852 22 14 ( 781 1db3_A) ( 1948 1gtm_A) 0.3480 0.4388 7.6515 ( 2 11 28) 0 0.4824 0.6246 22 16 ( 781 1db3_A) ( 1956 1gu7_A) 0.3182 0.4117 6.6040 ( 0 5 21) 0 0.4998 0.6462 22 17 ( 781 1db3_A) ( 2004 1gy8_A) 0.8164 0.7812 3.5305 ( 4 111 153) 0 0.8164 0.7829 22 23 ( 781 1db3_A) ( 2016 1gz3_A) 0.2273 0.2941 4.4219 ( 0 3 10) 0 0.4999 0.6466 22 17 ( 781 1db3_A) ( 2017 1gz6_A) 0.6785 0.7447 3.7813 ( 3 55 105) 0 0.6785 0.7447 22 20 ( 781 1db3_A) ( 2046 1h2b_A) 0.3182 0.5000 3.2199 ( 0 8 21) 0 0.5448 0.8512 22 14 ( 781 1db3_A) ( 2090 1h5q_A) 0.5908 0.6499 2.6377 ( 1 41 78) 0 0.6184 0.6720 22 20 ( 781 1db3_A) ( 2095 1h6d_A) 0.2727 0.4284 6.9760 ( 0 6 15) 0 0.4995 0.7811 22 14 ( 781 1db3_A) ( 2180 1hdc_A) 0.6210 0.7729 3.9674 ( 4 45 91) 0 0.6315 0.8064 22 17 ( 781 1db3_A) ( 2189 1hdo_A) 0.5454 0.7999 3.0081 ( 0 36 66) 0 0.5454 0.7999 22 15 ( 781 1db3_A) ( 2194 1het_A) 0.3182 0.4667 2.7336 ( 0 7 21) 0 0.5000 0.7332 22 15 ( 781 1db3_A) ( 2270 1hrd_A) 0.3098 0.4020 8.6025 ( 2 11 21) 0 0.4992 0.6838 22 16 ( 781 1db3_A) ( 2309 1hwx_A) 0.2597 0.3134 9.9336 ( 2 8 15) 0 0.4105 0.5293 22 17 ( 781 1db3_A) ( 2316 1hxh_A) 0.6362 0.8742 3.9272 ( 1 44 91) 0 0.6362 0.8742 22 16 ( 781 1db3_A) ( 2328 1hye_A) 0.4545 0.9079 4.7368 ( 0 21 45) 0 0.4545 0.9079 22 11 ( 781 1db3_A) ( 2330 1hyh_A) 0.4522 0.8456 4.9544 ( 2 24 45) 0 0.4542 0.8982 22 11 ( 781 1db3_A) ( 2368 1i24_A) 0.8175 0.6664 3.3069 ( 3 108 153) 0 0.8603 0.7025 22 27 ( 781 1db3_A) ( 2376 1i36_A) 0.4516 0.6480 6.9930 ( 2 23 45) 0 0.4544 0.6656 22 15 ( 781 1db3_A) ( 2463 1id1_A) 0.4997 0.8426 3.6896 ( 1 24 55) 0 0.4997 0.8426 22 13 ( 781 1db3_A) ( 2615 1iuk_A) 0.4091 0.7498 3.6111 ( 0 10 36) 0 0.4488 0.7498 22 12 ( 781 1db3_A) ( 2657 1iy8_A) 0.5909 0.7647 2.4883 ( 0 37 78) 0 0.5909 0.7647 22 17 ( 781 1db3_A) ( 2674 1iz0_A) 0.3182 0.4667 3.3286 ( 0 7 21) 0 0.5449 0.7964 22 15 ( 781 1db3_A) ( 2725 1j3v_A) 0.4090 0.6424 5.8374 ( 0 17 36) 0 0.4090 0.6424 22 14 ( 781 1db3_A) ( 2736 1j5p_A) 0.4518 0.8919 4.8554 ( 2 23 45) 0 0.4544 0.9907 22 10 ( 781 1db3_A) ( 2781 1ja9_A) 0.5000 0.6470 3.1679 ( 0 29 55) 0 0.6361 0.8227 22 17 ( 781 1db3_A) ( 2789 1jax_A) 0.2273 0.2500 4.7894 ( 0 4 10) 0 0.5296 0.5753 22 20 ( 781 1db3_A) ( 3017 1jqb_A) 0.3182 0.4667 3.0081 ( 0 9 21) 0 0.5000 0.7332 22 15 ( 781 1db3_A) ( 3059 1jtv_A) 0.6203 0.7369 6.1839 ( 5 56 91) 0 0.6203 0.7369 22 18 ( 781 1db3_A) ( 3072 1jvb_A) 0.3182 0.5384 3.3373 ( 0 8 21) 0 0.4996 0.8403 22 13 ( 781 1db3_A) ( 3144 1k2w_A) 0.5909 0.7647 2.6463 ( 0 43 78) 0 0.6360 0.8224 22 17 ( 781 1db3_A) ( 3192 1k6j_A) 0.7705 0.7069 4.0627 ( 4 97 136) 0 0.7705 0.7069 22 24 ( 781 1db3_A) ( 3257 1kbz_A) 0.8172 0.9453 3.5105 ( 3 98 153) 0 0.8172 0.9453 22 19 ( 781 1db3_A) ( 3385 1kol_A) 0.2727 0.3749 7.2035 ( 0 7 15) 0 0.5451 0.7485 22 16 ( 781 1db3_A) ( 3414 1ks9_A) 0.2273 0.2941 2.3050 ( 0 3 10) 0 0.3895 0.4703 22 17 ( 781 1db3_A) ( 3481 1kyq_A) 0.3182 0.6999 3.0619 ( 0 6 21) 0 0.3636 0.7998 22 10 ( 781 1db3_A) ( 3561 1l7d_A) 0.3182 0.4665 7.0229 ( 0 5 21) 0 0.4434 0.6040 22 15 ( 781 1db3_A) ( 3593 1lc0_A) 0.4759 0.6720 6.6749 ( 3 22 55) 0 0.4993 0.9033 22 12 ( 781 1db3_A) ( 3606 1ldn_A) 0.4543 0.8291 4.5859 ( 1 23 45) 0 0.4995 0.9070 22 12 ( 781 1db3_A) ( 3610 1leh_A) 0.3182 0.5381 6.9273 ( 0 8 21) 0 0.4085 0.6847 22 13 ( 781 1db3_A) ( 3633 1li4_A) 0.2670 0.4025 7.4680 ( 1 5 15) 0 0.4994 0.8378 22 13 ( 781 1db3_A) ( 3637 1lj8_A) 0.4544 0.4998 4.7163 ( 1 28 45) 0 0.4545 0.4999 22 20 ( 781 1db3_A) ( 3677 1lnq_A) 0.4999 0.6109 5.3200 ( 0 34 55) 0 0.4999 0.6109 22 18 ( 781 1db3_A) ( 3722 1lss_A) 0.4545 0.8332 3.2468 ( 0 22 45) 0 0.4999 0.9149 22 12 ( 781 1db3_A) ( 3724 1lsu_A) 0.4997 0.9102 4.2088 ( 1 23 55) 0 0.4997 0.9102 22 12 ( 781 1db3_A) ( 3734 1lu9_A) 0.3182 0.4999 5.7228 ( 0 6 21) 0 0.4998 0.7836 22 14 ( 781 1db3_A) ( 3854 1m66_A) 0.4525 0.6154 4.9605 ( 2 25 45) 0 0.4525 0.6154 22 16 ( 781 1db3_A) ( 4047 1mv8_A) 0.4091 0.5293 4.8042 ( 0 22 36) 0 0.4994 0.6451 22 17 ( 781 1db3_A) ( 4067 1mx3_A) 0.2727 0.4286 3.0917 ( 0 5 15) 0 0.5404 0.8138 22 14 ( 781 1db3_A) ( 4131 1n5d_A) 0.6363 0.8233 2.9276 ( 1 52 91) 0 0.6363 0.8233 22 17 ( 781 1db3_A) ( 4341 1np3_A) 0.2727 0.3529 4.8417 ( 0 5 15) 0 0.4983 0.6409 22 17 ( 781 1db3_A) ( 4351 1npy_A) 0.3174 0.5277 4.1848 ( 1 10 21) 0 0.4887 0.7655 22 13 ( 781 1db3_A) ( 4404 1nvm_B) 0.4091 0.7498 3.8503 ( 0 15 36) 0 0.4998 0.9120 22 12 ( 781 1db3_A) ( 4409 1nvt_A) 0.3182 0.5833 3.9886 ( 0 10 21) 0 0.4884 0.8329 22 12 ( 781 1db3_A) ( 4417 1nwc_A) 0.2727 0.5454 3.3924 ( 0 6 15) 0 0.4996 0.9889 22 11 ( 781 1db3_A) ( 4430 1nxq_A) 0.5909 0.7222 2.7347 ( 0 40 78) 0 0.6281 0.7561 22 18 ( 781 1db3_A) ( 4447 1nyt_A) 0.3636 0.6150 5.9100 ( 0 13 28) 0 0.4999 0.8447 22 13 ( 781 1db3_A) ( 4499 1o5i_A) 0.5909 0.7646 2.7978 ( 0 35 78) 0 0.5909 0.7646 22 17 ( 781 1db3_A) ( 4520 1o6z_A) 0.4543 0.9025 4.7501 ( 1 23 45) 0 0.4544 0.9034 22 11 ( 781 1db3_A) ( 4549 1o89_A) 0.2727 0.4615 2.9016 ( 0 7 15) 0 0.4545 0.7691 22 13 ( 781 1db3_A) ( 4573 1oaa ) 0.5908 0.8117 3.3507 ( 1 35 78) 0 0.6776 0.9174 22 16 ( 781 1db3_A) ( 4585 1obb_A) 0.4976 0.8153 5.2182 ( 2 27 55) 0 0.5191 0.8153 22 13 ( 781 1db3_A) ( 4588 1obf_O) 0.4091 0.7499 3.4447 ( 0 19 36) 0 0.4491 0.7499 22 12 ( 781 1db3_A) ( 4668 1oi7_A) 0.4545 0.9991 3.9318 ( 0 24 45) 0 0.4545 0.9991 22 10 ( 781 1db3_A) ( 4730 1ono_A) 0.4005 0.6306 4.0387 ( 2 15 36) 0 0.4886 0.8284 22 12 ( 781 1db3_A) ( 4739 1ooe_A) 0.5865 0.8902 5.0717 ( 3 43 78) 0 0.5865 0.8902 22 14 ( 781 1db3_A) ( 4765 1orr_A) 0.8573 0.7280 3.4413 ( 6 126 171) 0 0.8573 0.7280 22 26 ( 781 1db3_A) ( 4863 1p1j_A) 0.4998 0.4399 4.5307 ( 1 26 55) 0 0.4998 0.4399 22 25 ( 781 1db3_A) ( 4943 1p9l_A) 0.5000 0.9984 4.4966 ( 0 28 55) 0 0.5000 0.9984 22 11 ( 781 1db3_A) ( 5029 1pjq_A) 0.3636 0.7994 4.5837 ( 0 10 28) 0 0.4005 0.7997 22 10 ( 781 1db3_A) ( 5045 1pl7_A) 0.3182 0.5384 2.9299 ( 0 8 21) 0 0.5448 0.9143 22 13 ( 781 1db3_A) ( 5082 1pqw_A) 0.3182 0.4375 3.3881 ( 0 7 21) 0 0.5338 0.6993 22 16 ( 781 1db3_A) ( 5097 1psd_A) 0.2727 0.5000 3.3494 ( 0 5 15) 0 0.5000 0.9157 22 12 ( 781 1db3_A) ( 5140 1px0_A) 0.4371 0.4645 3.6317 ( 9 43 78) 0 0.5423 0.7351 22 16 ( 781 1db3_A) ( 5227 1q7c_A) 0.6363 0.7776 2.7794 ( 1 51 91) 0 0.6363 0.7776 22 18 ( 781 1db3_A) ( 5362 1qki_A) 0.4543 0.8288 3.8912 ( 1 22 45) 0 0.4545 0.8320 22 12 ( 781 1db3_A) ( 5387 1qmg_A) 0.2727 0.3158 7.2844 ( 0 6 15) 0 0.4997 0.5783 22 19 ( 781 1db3_A) ( 5406 1qor_A) 0.3182 0.5384 3.5733 ( 0 8 21) 0 0.5443 0.9073 22 13 ( 781 1db3_A) ( 5409 1qp8_A) 0.3182 0.5383 5.2762 ( 0 5 21) 0 0.5000 0.8458 22 13 ( 781 1db3_A) ( 5444 1qsg_A) 0.5908 0.7220 3.0858 ( 1 45 78) 0 0.6226 0.7426 22 18 ( 781 1db3_A) ( 5493 1qyc_A) 0.7263 0.6661 4.1741 ( 3 87 120) 0 0.7525 0.6950 22 24 ( 781 1db3_A) ( 5571 1r6d_A) 0.8163 0.7488 3.4372 ( 4 109 153) 0 0.8163 0.7488 22 24 ( 781 1db3_A) ( 5654 1rjw_A) 0.3182 0.4667 3.0932 ( 0 8 21) 0 0.5000 0.7332 22 15 ( 781 1db3_A) ( 5665 1rkx_A) 0.7272 0.7618 3.3991 ( 1 83 120) 0 0.7272 0.7618 22 21 ( 781 1db3_A) ( 5786 1say_A) 0.2727 0.4999 5.2656 ( 0 5 15) 0 0.4680 0.8330 22 12 ( 781 1db3_A) ( 5838 1spx_A) 0.5909 0.7647 2.6540 ( 0 35 78) 0 0.5909 0.7647 22 17 ( 781 1db3_A) ( 5877 1t2d_A) 0.4522 0.8459 4.5408 ( 2 24 45) 0 0.4586 0.8459 22 11 ( 781 1db3_A) ( 5942 1u8x_X) 0.4996 0.9093 6.0753 ( 1 25 55) 0 0.4996 0.9093 22 12 ( 781 1db3_A) ( 5954 1uay_A) 0.6363 0.8749 2.7874 ( 0 55 91) 0 0.6363 0.8749 22 16 ( 781 1db3_A) ( 6085 1ur5_A) 0.4543 0.8291 4.6412 ( 1 23 45) 0 0.4543 0.8291 22 12 ( 781 1db3_A) ( 6114 1uuf_A) 0.2273 0.3571 6.0960 ( 0 2 10) 0 0.5450 0.8532 22 14 ( 781 1db3_A) ( 6257 1vi2_A) 0.2727 0.4615 3.2652 ( 0 7 15) 0 0.4999 0.8453 22 13 ( 781 1db3_A) ( 6274 1vj0_A) 0.3182 0.4375 3.1608 ( 0 8 21) 0 0.5000 0.6874 22 16 ( 781 1db3_A) ( 6276 1vj1_A) 0.3182 0.5000 3.3016 ( 0 9 21) 0 0.5446 0.8492 22 14 ( 781 1db3_A) ( 6292 1vjp_A) 0.5000 0.7853 4.3407 ( 0 25 55) 0 0.5000 0.7853 22 14 ( 781 1db3_A) ( 6341 1xcb_A) 0.3182 0.8739 4.8205 ( 0 9 21) 0 0.3634 0.9679 22 8 ( 781 1db3_A) ( 6388 2ae1 ) 0.5908 0.7643 2.6433 ( 1 38 78) 0 0.5908 0.7643 22 17 ( 781 1db3_A) ( 6420 2cmd ) 0.4522 0.7905 4.2188 ( 2 24 45) 0 0.4885 0.8280 22 12 ( 781 1db3_A) ( 6426 2dap ) 0.4545 0.9981 4.7307 ( 0 19 45) 0 0.4545 0.9981 22 10 ( 781 1db3_A) ( 6497 2nac_A) 0.2727 0.4613 7.6654 ( 0 4 15) 0 0.4545 0.7688 22 13 ( 781 1db3_A) ( 6505 2pgd ) 0.2727 0.4285 6.7307 ( 0 7 15) 0 0.4542 0.7113 22 14 ( 781 1db3_A) ( 6627 6ldh ) 0.4968 0.8064 4.0216 ( 2 25 55) 0 0.4968 0.8064 22 13 -------------------------------------------------------------------------------------------------------------------------