------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 3610 1leh_A) ( 42 1a4i_A) 0.5789 0.6915 5.6994 ( 2 17 28) 0 0.5789 0.6993 13 10 ( 3610 1leh_A) ( 265 1b16_A) 0.5383 0.4374 5.7661 ( 0 10 21) 0 0.6915 0.5622 13 16 ( 3610 1leh_A) ( 312 1b7g_O) 0.3845 0.3845 6.8057 ( 0 0 10) 0 0.6916 0.6916 13 13 ( 3610 1leh_A) ( 319 1b8p_A) 0.5384 0.6362 4.7788 ( 0 4 21) 0 0.6149 0.7262 13 11 ( 3610 1leh_A) ( 352 1bdb ) 0.4614 0.3333 6.0241 ( 0 1 15) 0 0.7120 0.5426 13 18 ( 3610 1leh_A) ( 377 1bg6 ) 0.4615 0.3333 2.5103 ( 0 7 15) 0 0.6131 0.4440 13 18 ( 3610 1leh_A) ( 506 1c1d_A) 0.8926 0.9559 1.6535 ( 3 45 66) 0 0.8926 0.9559 13 12 ( 3610 1leh_A) ( 707 1cyd_A) 0.4614 0.3333 6.0270 ( 0 2 15) 0 0.7121 0.5427 13 18 ( 3610 1leh_A) ( 781 1db3_A) 0.5381 0.3182 6.6599 ( 0 8 21) 0 0.6847 0.4085 13 22 ( 3610 1leh_A) ( 847 1dih ) 0.3846 0.7142 3.4812 ( 0 0 10) 0 0.4615 0.8567 13 7 ( 3610 1leh_A) ( 873 1dlj_A) 0.4615 0.3750 4.5487 ( 0 7 15) 0 0.6500 0.5462 13 16 ( 3610 1leh_A) ( 906 1dpg_A) 0.3846 0.3846 4.8204 ( 0 2 10) 0 0.6145 0.6145 13 13 ( 3610 1leh_A) ( 972 1dxy ) 0.6098 0.4980 1.7329 ( 1 14 28) 0 0.6418 0.5427 13 16 ( 3610 1leh_A) ( 1053 1e6u_A) 0.4613 0.2727 7.0004 ( 0 7 15) 0 0.6568 0.4062 13 22 ( 3610 1leh_A) ( 1071 1e7w_A) 0.6142 0.4703 7.7837 ( 0 11 28) 0 0.7627 0.5865 13 17 ( 3610 1leh_A) ( 1094 1ebf_A) 0.3077 0.3333 5.4299 ( 0 2 6) 0 0.5383 0.5831 13 12 ( 3610 1leh_A) ( 1117 1edz_A) 0.5788 0.6148 5.9748 ( 2 17 28) 0 0.5788 0.6148 13 12 ( 3610 1leh_A) ( 1189 1ek6_A) 0.4614 0.2727 6.0327 ( 0 2 15) 0 0.7657 0.4543 13 22 ( 3610 1leh_A) ( 1219 1enp ) 0.3846 0.2778 5.1554 ( 0 2 10) 0 0.6914 0.4998 13 18 ( 3610 1leh_A) ( 1221 1eny ) 0.4614 0.3529 6.1038 ( 0 3 15) 0 0.6912 0.5291 13 17 ( 3610 1leh_A) ( 1242 1eq2_A) 0.5138 0.3162 5.3330 ( 1 8 21) 0 0.7667 0.4544 13 22 ( 3610 1leh_A) ( 1355 1f14_A) 0.4419 0.3900 5.4414 ( 1 7 15) 0 0.6146 0.5329 13 15 ( 3610 1leh_A) ( 1436 1f8f_A) 0.4023 0.3845 9.6396 ( 1 5 15) 0 0.6898 0.6411 13 14 ( 3610 1leh_A) ( 1487 1ff9_A) 0.4995 0.4461 3.1777 ( 1 7 21) 0 0.6148 0.5330 13 15 ( 3610 1leh_A) ( 1531 1fjh_A) 0.4613 0.3749 7.6749 ( 0 1 15) 0 0.6801 0.5581 13 16 ( 3610 1leh_A) ( 1560 1fmc_A) 0.4614 0.3529 6.9073 ( 0 0 15) 0 0.7632 0.5866 13 17 ( 3610 1leh_A) ( 1804 1gdh_A) 0.6743 0.6303 2.1299 ( 1 12 36) 0 0.6783 0.6331 13 14 ( 3610 1leh_A) ( 1807 1gee_A) 0.5702 0.4291 7.3819 ( 3 20 36) 0 0.7653 0.4995 13 20 ( 3610 1leh_A) ( 1809 1geg_A) 0.4615 0.3529 5.4343 ( 0 1 15) 0 0.7270 0.5761 13 17 ( 3610 1leh_A) ( 1899 1gpj_A) 0.7668 0.8297 4.4800 ( 1 24 45) 0 0.7668 0.8297 13 12 ( 3610 1leh_A) ( 1922 1gr0_A) 0.3845 0.3571 7.7789 ( 0 1 10) 0 0.6798 0.6341 13 14 ( 3610 1leh_A) ( 1948 1gtm_A) 0.8456 0.6873 2.1051 ( 1 38 55) 0 0.8456 0.6873 13 16 ( 3610 1leh_A) ( 1956 1gu7_A) 0.3895 0.3727 5.2227 ( 5 20 36) 0 0.6618 0.5208 13 17 ( 3610 1leh_A) ( 2004 1gy8_A) 0.4612 0.2609 7.8077 ( 0 7 15) 0 0.6887 0.3911 13 23 ( 3610 1leh_A) ( 2016 1gz3_A) 0.7434 0.5811 4.9016 ( 2 25 45) 0 0.7656 0.5873 13 17 ( 3610 1leh_A) ( 2017 1gz6_A) 0.3846 0.2500 4.2509 ( 0 2 10) 0 0.6153 0.4000 13 20 ( 3610 1leh_A) ( 2046 1h2b_A) 0.3846 0.3571 5.1333 ( 0 0 10) 0 0.6153 0.5714 13 14 ( 3610 1leh_A) ( 2090 1h5q_A) 0.4749 0.3405 7.6391 ( 1 6 21) 0 0.7199 0.4935 13 20 ( 3610 1leh_A) ( 2095 1h6d_A) 0.6151 0.5712 5.3799 ( 0 8 28) 0 0.6840 0.6371 13 14 ( 3610 1leh_A) ( 2180 1hdc_A) 0.4614 0.3529 5.8452 ( 0 2 15) 0 0.6914 0.5292 13 17 ( 3610 1leh_A) ( 2189 1hdo_A) 0.3846 0.3333 4.7698 ( 0 2 10) 0 0.6152 0.5332 13 15 ( 3610 1leh_A) ( 2194 1het_A) 0.4615 0.4000 4.4108 ( 0 3 15) 0 0.6845 0.5962 13 15 ( 3610 1leh_A) ( 2270 1hrd_A) 0.8334 0.6829 3.5812 ( 2 34 55) 0 0.8334 0.6829 13 16 ( 3610 1leh_A) ( 2309 1hwx_A) 0.7682 0.5880 2.7783 ( 1 29 45) 0 0.7682 0.5880 13 17 ( 3610 1leh_A) ( 2316 1hxh_A) 0.5363 0.4874 5.7344 ( 2 12 36) 0 0.7204 0.6061 13 16 ( 3610 1leh_A) ( 2328 1hye_A) 0.4614 0.5451 6.3953 ( 0 5 15) 0 0.6148 0.7259 13 11 ( 3610 1leh_A) ( 2330 1hyh_A) 0.6150 0.7264 5.7440 ( 0 11 28) 0 0.6150 0.7264 13 11 ( 3610 1leh_A) ( 2368 1i24_A) 0.3846 0.1852 4.5330 ( 0 1 10) 0 0.6917 0.3333 13 27 ( 3610 1leh_A) ( 2376 1i36_A) 0.6919 0.5998 5.1870 ( 0 17 36) 0 0.7682 0.6662 13 15 ( 3610 1leh_A) ( 2463 1id1_A) 0.6869 0.6869 5.9566 ( 1 17 36) 0 0.6869 0.6869 13 13 ( 3610 1leh_A) ( 2615 1iuk_A) 0.5384 0.5833 3.9244 ( 0 4 21) 0 0.6144 0.6652 13 12 ( 3610 1leh_A) ( 2657 1iy8_A) 0.4614 0.3529 5.7861 ( 0 2 15) 0 0.7673 0.5877 13 17 ( 3610 1leh_A) ( 2674 1iz0_A) 0.7134 0.6371 4.3451 ( 2 20 45) 0 0.7134 0.6371 13 15 ( 3610 1leh_A) ( 2725 1j3v_A) 0.5384 0.5000 3.1238 ( 0 9 21) 0 0.6895 0.6409 13 14 ( 3610 1leh_A) ( 2736 1j5p_A) 0.4615 0.6000 3.5251 ( 0 2 15) 0 0.5384 0.6999 13 10 ( 3610 1leh_A) ( 2781 1ja9_A) 0.4615 0.3529 5.6150 ( 0 2 15) 0 0.7120 0.5713 13 17 ( 3610 1leh_A) ( 2789 1jax_A) 0.5310 0.3868 4.5719 ( 2 13 28) 0 0.6146 0.3999 13 20 ( 3610 1leh_A) ( 3017 1jqb_A) 0.5384 0.4667 3.2696 ( 0 7 21) 0 0.6892 0.5985 13 15 ( 3610 1leh_A) ( 3059 1jtv_A) 0.5163 0.4441 6.0574 ( 3 17 36) 0 0.6915 0.4998 13 18 ( 3610 1leh_A) ( 3072 1jvb_A) 0.5385 0.5385 2.4093 ( 0 7 21) 0 0.6152 0.6152 13 13 ( 3610 1leh_A) ( 3144 1k2w_A) 0.4614 0.3529 6.0529 ( 0 3 15) 0 0.6914 0.5292 13 17 ( 3610 1leh_A) ( 3192 1k6j_A) 0.6855 0.3747 6.2070 ( 1 16 36) 0 0.8209 0.4571 13 24 ( 3610 1leh_A) ( 3257 1kbz_A) 0.4599 0.3155 11.9717 ( 0 8 15) 0 0.6817 0.4720 13 19 ( 3610 1leh_A) ( 3385 1kol_A) 0.3846 0.3125 3.8151 ( 0 2 10) 0 0.6189 0.5323 13 16 ( 3610 1leh_A) ( 3414 1ks9_A) 0.4574 0.3846 5.4359 ( 2 11 21) 0 0.4990 0.4001 13 17 ( 3610 1leh_A) ( 3481 1kyq_A) 0.4615 0.6000 3.5752 ( 0 2 15) 0 0.4615 0.6000 13 10 ( 3610 1leh_A) ( 3561 1l7d_A) 0.6897 0.5987 4.0052 ( 1 20 36) 0 0.6897 0.5987 13 15 ( 3610 1leh_A) ( 3593 1lc0_A) 0.3845 0.4165 7.8279 ( 0 4 10) 0 0.6846 0.7386 13 12 ( 3610 1leh_A) ( 3606 1ldn_A) 0.6076 0.6552 5.2985 ( 1 13 28) 0 0.6869 0.7420 13 12 ( 3610 1leh_A) ( 3610 1leh_A) 1.0000 1.0000 0.0000 ( 0 59 78) 0 1.0000 1.0000 13 13 ( 3610 1leh_A) ( 3633 1li4_A) 0.5951 0.5951 2.0770 ( 1 10 28) 0 0.6152 0.6152 13 13 ( 3610 1leh_A) ( 3637 1lj8_A) 0.3077 0.2000 6.6269 ( 0 2 6) 0 0.6006 0.3982 13 20 ( 3610 1leh_A) ( 3677 1lnq_A) 0.6050 0.4423 5.1003 ( 1 12 28) 0 0.6864 0.4988 13 18 ( 3610 1leh_A) ( 3722 1lss_A) 0.6010 0.6457 4.7647 ( 1 11 28) 0 0.6414 0.6786 13 12 ( 3610 1leh_A) ( 3724 1lsu_A) 0.5384 0.5833 3.4910 ( 0 3 21) 0 0.6182 0.6664 13 12 ( 3610 1leh_A) ( 3734 1lu9_A) 0.6006 0.5828 5.0477 ( 4 27 45) 0 0.6905 0.6565 13 14 ( 3610 1leh_A) ( 3854 1m66_A) 0.6092 0.4978 6.3733 ( 1 14 28) 0 0.6106 0.4983 13 16 ( 3610 1leh_A) ( 4047 1mv8_A) 0.5309 0.4097 5.2500 ( 1 11 21) 0 0.6417 0.5145 13 17 ( 3610 1leh_A) ( 4067 1mx3_A) 0.4453 0.4389 1.8760 ( 3 14 36) 0 0.6914 0.6422 13 14 ( 3610 1leh_A) ( 4131 1n5d_A) 0.4614 0.3529 6.5091 ( 0 3 15) 0 0.6917 0.5292 13 17 ( 3610 1leh_A) ( 4341 1np3_A) 0.5385 0.4118 2.7400 ( 0 8 21) 0 0.6051 0.4929 13 17 ( 3610 1leh_A) ( 4351 1npy_A) 0.6111 0.6111 3.3380 ( 1 15 28) 0 0.6152 0.6152 13 13 ( 3610 1leh_A) ( 4404 1nvm_B) 0.4615 0.4999 5.6455 ( 0 3 15) 0 0.6917 0.7491 13 12 ( 3610 1leh_A) ( 4409 1nvt_A) 0.6110 0.6602 3.9877 ( 1 15 28) 0 0.6150 0.6661 13 12 ( 3610 1leh_A) ( 4417 1nwc_A) 0.3846 0.4544 6.6030 ( 0 3 10) 0 0.6150 0.7264 13 11 ( 3610 1leh_A) ( 4430 1nxq_A) 0.6838 0.4983 6.2396 ( 1 15 36) 0 0.7642 0.5546 13 18 ( 3610 1leh_A) ( 4447 1nyt_A) 0.6897 0.6897 4.0119 ( 1 20 36) 0 0.6897 0.6897 13 13 ( 3610 1leh_A) ( 4499 1o5i_A) 0.4613 0.3529 7.2260 ( 0 0 15) 0 0.7580 0.5852 13 17 ( 3610 1leh_A) ( 4520 1o6z_A) 0.6151 0.7265 5.6132 ( 0 11 28) 0 0.6151 0.7265 13 11 ( 3610 1leh_A) ( 4549 1o89_A) 0.6153 0.6153 3.6592 ( 0 7 28) 0 0.6183 0.6183 13 13 ( 3610 1leh_A) ( 4573 1oaa ) 0.3846 0.3125 5.4675 ( 0 1 10) 0 0.7640 0.6231 13 16 ( 3610 1leh_A) ( 4585 1obb_A) 0.6153 0.6153 4.1110 ( 0 8 28) 0 0.6153 0.6153 13 13 ( 3610 1leh_A) ( 4588 1obf_O) 0.3846 0.4166 5.7926 ( 0 3 10) 0 0.5384 0.5833 13 12 ( 3610 1leh_A) ( 4668 1oi7_A) 0.4615 0.6000 3.4873 ( 0 2 15) 0 0.5384 0.6997 13 10 ( 3610 1leh_A) ( 4730 1ono_A) 0.5473 0.5737 4.5193 ( 1 7 28) 0 0.6869 0.7420 13 12 ( 3610 1leh_A) ( 4739 1ooe_A) 0.6300 0.5974 8.4605 ( 2 17 36) 0 0.6300 0.5974 13 14 ( 3610 1leh_A) ( 4765 1orr_A) 0.4615 0.2308 5.3896 ( 0 0 15) 0 0.6920 0.3461 13 26 ( 3610 1leh_A) ( 4863 1p1j_A) 0.3077 0.1600 7.5605 ( 0 3 6) 0 0.6489 0.3581 13 25 ( 3610 1leh_A) ( 4943 1p9l_A) 0.4614 0.5452 5.8038 ( 0 2 15) 0 0.6152 0.7268 13 11 ( 3610 1leh_A) ( 5029 1pjq_A) 0.3845 0.4997 6.9370 ( 0 0 10) 0 0.4615 0.6000 13 10 ( 3610 1leh_A) ( 5045 1pl7_A) 0.6153 0.6153 4.2679 ( 0 8 28) 0 0.6153 0.6153 13 13 ( 3610 1leh_A) ( 5082 1pqw_A) 0.6421 0.5428 4.5435 ( 1 9 36) 0 0.6911 0.5621 13 16 ( 3610 1leh_A) ( 5097 1psd_A) 0.6079 0.6556 1.8391 ( 1 13 28) 0 0.6079 0.6556 13 12 ( 3610 1leh_A) ( 5140 1px0_A) 0.3077 0.2500 5.4826 ( 0 2 6) 0 0.6884 0.5611 13 16 ( 3610 1leh_A) ( 5227 1q7c_A) 0.4615 0.3333 5.7600 ( 0 2 15) 0 0.7211 0.5449 13 18 ( 3610 1leh_A) ( 5362 1qki_A) 0.3846 0.4166 6.6575 ( 0 3 10) 0 0.6141 0.6648 13 12 ( 3610 1leh_A) ( 5387 1qmg_A) 0.5385 0.3684 2.3841 ( 0 8 21) 0 0.6115 0.4205 13 19 ( 3610 1leh_A) ( 5406 1qor_A) 0.6152 0.6152 4.5084 ( 0 10 28) 0 0.6911 0.6911 13 13 ( 3610 1leh_A) ( 5409 1qp8_A) 0.5385 0.5385 2.1561 ( 0 5 21) 0 0.6153 0.6153 13 13 ( 3610 1leh_A) ( 5444 1qsg_A) 0.6149 0.4443 6.2285 ( 0 11 28) 0 0.6912 0.4998 13 18 ( 3610 1leh_A) ( 5493 1qyc_A) 0.4614 0.2500 6.5589 ( 0 5 15) 0 0.6911 0.4080 13 24 ( 3610 1leh_A) ( 5571 1r6d_A) 0.4615 0.2500 5.7372 ( 0 6 15) 0 0.7649 0.4165 13 24 ( 3610 1leh_A) ( 5654 1rjw_A) 0.4615 0.4000 4.4890 ( 0 5 15) 0 0.6905 0.5991 13 15 ( 3610 1leh_A) ( 5665 1rkx_A) 0.4613 0.2857 7.4937 ( 0 7 15) 0 0.7375 0.4730 13 21 ( 3610 1leh_A) ( 5786 1say_A) 0.6079 0.6556 2.4991 ( 1 13 28) 0 0.6153 0.6665 13 12 ( 3610 1leh_A) ( 5838 1spx_A) 0.6783 0.5256 6.1684 ( 1 13 36) 0 0.7018 0.5678 13 17 ( 3610 1leh_A) ( 5877 1t2d_A) 0.6151 0.7267 5.2746 ( 0 9 28) 0 0.6151 0.7267 13 11 ( 3610 1leh_A) ( 5942 1u8x_X) 0.5384 0.5832 4.9118 ( 0 4 21) 0 0.5602 0.5902 13 12 ( 3610 1leh_A) ( 5954 1uay_A) 0.3846 0.3125 6.0952 ( 0 1 10) 0 0.6151 0.4999 13 16 ( 3610 1leh_A) ( 6085 1ur5_A) 0.5384 0.5832 4.6653 ( 0 8 21) 0 0.6149 0.6659 13 12 ( 3610 1leh_A) ( 6114 1uuf_A) 0.6079 0.5662 2.9911 ( 1 13 28) 0 0.7413 0.6946 13 14 ( 3610 1leh_A) ( 6257 1vi2_A) 0.6111 0.6111 3.4861 ( 1 15 28) 0 0.6916 0.6916 13 13 ( 3610 1leh_A) ( 6274 1vj0_A) 0.5857 0.4887 3.8145 ( 1 9 28) 0 0.6903 0.5618 13 16 ( 3610 1leh_A) ( 6276 1vj1_A) 0.4024 0.3845 9.1619 ( 1 5 15) 0 0.6841 0.6371 13 14 ( 3610 1leh_A) ( 6292 1vjp_A) 0.3296 0.3158 5.6103 ( 1 4 10) 0 0.6897 0.6411 13 14 ( 3610 1leh_A) ( 6341 1xcb_A) 0.4615 0.7493 5.2522 ( 0 6 15) 0 0.4615 0.7493 13 8 ( 3610 1leh_A) ( 6388 2ae1 ) 0.6141 0.4702 7.9259 ( 0 10 28) 0 0.7118 0.5712 13 17 ( 3610 1leh_A) ( 6420 2cmd ) 0.6152 0.6664 4.6511 ( 0 11 28) 0 0.6152 0.6664 13 12 ( 3610 1leh_A) ( 6426 2dap ) 0.4614 0.5995 6.4083 ( 0 3 15) 0 0.5382 0.6989 13 10 ( 3610 1leh_A) ( 6497 2nac_A) 0.6675 0.6675 2.2946 ( 1 11 36) 0 0.6675 0.6675 13 13 ( 3610 1leh_A) ( 6505 2pgd ) 0.4608 0.4281 9.8027 ( 0 8 15) 0 0.6315 0.5985 13 14 ( 3610 1leh_A) ( 6627 6ldh ) 0.5382 0.5382 6.3691 ( 0 4 21) 0 0.6152 0.6152 13 13 -------------------------------------------------------------------------------------------------------------------------