------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 319 1b8p_A) ( 42 1a4i_A) 0.5454 0.5999 4.3444 ( 0 5 15) 0 0.6362 0.6998 11 10 ( 319 1b8p_A) ( 265 1b16_A) 0.9979 0.6872 4.8676 ( 0 25 55) 0 0.9979 0.6872 11 16 ( 319 1b8p_A) ( 312 1b7g_O) 0.9068 0.7682 5.5999 ( 0 22 45) 0 0.9068 0.7682 11 13 ( 319 1b8p_A) ( 319 1b8p_A) 1.0000 1.0000 0.0000 ( 0 34 55) 0 1.0000 1.0000 11 11 ( 319 1b8p_A) ( 352 1bdb ) 0.9984 0.6110 4.5024 ( 0 26 55) 0 0.9984 0.6110 11 18 ( 319 1b8p_A) ( 377 1bg6 ) 0.9974 0.6109 3.3363 ( 1 33 55) 0 0.9974 0.6109 11 18 ( 319 1b8p_A) ( 506 1c1d_A) 0.6361 0.5832 5.0447 ( 0 2 21) 0 0.7262 0.6660 11 12 ( 319 1b8p_A) ( 707 1cyd_A) 0.9974 0.6109 5.1146 ( 0 22 55) 0 0.9974 0.6109 11 18 ( 319 1b8p_A) ( 781 1db3_A) 0.9025 0.4543 4.7294 ( 1 23 45) 0 0.9873 0.4996 11 22 ( 319 1b8p_A) ( 847 1dih ) 0.6016 0.7925 5.2327 ( 1 9 21) 0 0.6362 0.9984 11 7 ( 319 1b8p_A) ( 873 1dlj_A) 0.9975 0.6871 3.1878 ( 1 33 55) 0 0.9975 0.6871 11 16 ( 319 1b8p_A) ( 906 1dpg_A) 0.9950 0.8440 4.7735 ( 1 30 55) 0 0.9955 0.8442 11 13 ( 319 1b8p_A) ( 972 1dxy ) 0.5454 0.3750 2.8839 ( 0 6 15) 0 0.9146 0.6719 11 16 ( 319 1b8p_A) ( 1053 1e6u_A) 0.8179 0.4091 3.9132 ( 0 15 36) 0 0.9046 0.4544 11 22 ( 319 1b8p_A) ( 1071 1e7w_A) 0.9972 0.6467 5.2115 ( 0 23 55) 0 0.9972 0.6467 11 17 ( 319 1b8p_A) ( 1094 1ebf_A) 0.4545 0.4166 5.0419 ( 0 1 10) 0 0.7165 0.6783 11 12 ( 319 1b8p_A) ( 1117 1edz_A) 0.6362 0.5832 4.5887 ( 0 7 21) 0 0.8167 0.7490 11 12 ( 319 1b8p_A) ( 1189 1ek6_A) 0.9981 0.4999 4.7266 ( 0 27 55) 0 0.9981 0.4999 11 22 ( 319 1b8p_A) ( 1219 1enp ) 0.9975 0.6109 5.0770 ( 0 29 55) 0 0.9975 0.6109 11 18 ( 319 1b8p_A) ( 1221 1eny ) 0.9943 0.6464 5.1485 ( 1 30 55) 0 0.9961 0.6466 11 17 ( 319 1b8p_A) ( 1242 1eq2_A) 0.9023 0.4543 4.9460 ( 1 23 45) 0 0.9919 0.4997 11 22 ( 319 1b8p_A) ( 1355 1f14_A) 0.9972 0.7327 3.7030 ( 1 33 55) 0 0.9972 0.7327 11 15 ( 319 1b8p_A) ( 1436 1f8f_A) 0.9085 0.7141 3.9318 ( 0 20 45) 0 0.9085 0.7399 11 14 ( 319 1b8p_A) ( 1487 1ff9_A) 0.9951 0.7323 3.8820 ( 1 28 55) 0 0.9978 0.7329 11 15 ( 319 1b8p_A) ( 1531 1fjh_A) 0.8173 0.5624 5.0577 ( 0 10 36) 0 0.9064 0.6246 11 16 ( 319 1b8p_A) ( 1560 1fmc_A) 0.9973 0.6467 5.1796 ( 0 22 55) 0 0.9973 0.6467 11 17 ( 319 1b8p_A) ( 1804 1gdh_A) 0.6243 0.4963 4.0052 ( 1 12 21) 0 0.9243 0.7602 11 14 ( 319 1b8p_A) ( 1807 1gee_A) 0.9975 0.5499 5.0771 ( 0 26 55) 0 0.9975 0.5499 11 20 ( 319 1b8p_A) ( 1809 1geg_A) 0.9927 0.6462 5.1776 ( 1 27 55) 0 0.9935 0.6463 11 17 ( 319 1b8p_A) ( 1899 1gpj_A) 0.9052 0.8308 4.5055 ( 1 27 45) 0 0.9075 0.8323 11 12 ( 319 1b8p_A) ( 1922 1gr0_A) 0.8179 0.6428 3.7386 ( 0 15 36) 0 0.8179 0.6562 11 14 ( 319 1b8p_A) ( 1948 1gtm_A) 0.5586 0.4222 4.6062 ( 1 7 21) 0 0.7996 0.5772 11 16 ( 319 1b8p_A) ( 1956 1gu7_A) 0.9032 0.5876 4.8507 ( 1 24 45) 0 0.9080 0.6092 11 17 ( 319 1b8p_A) ( 2004 1gy8_A) 0.9971 0.4782 5.2389 ( 0 27 55) 0 0.9971 0.4782 11 23 ( 319 1b8p_A) ( 2016 1gz3_A) 0.8172 0.5293 5.1645 ( 0 13 36) 0 0.9040 0.5877 11 17 ( 319 1b8p_A) ( 2017 1gz6_A) 0.9973 0.5499 5.1427 ( 0 20 55) 0 0.9973 0.5499 11 20 ( 319 1b8p_A) ( 2046 1h2b_A) 0.9087 0.7142 3.6804 ( 0 21 45) 0 0.9087 0.7142 11 14 ( 319 1b8p_A) ( 2090 1h5q_A) 0.9975 0.5499 5.0750 ( 0 26 55) 0 0.9975 0.5499 11 20 ( 319 1b8p_A) ( 2095 1h6d_A) 0.9087 0.7142 3.6350 ( 0 18 45) 0 0.9087 0.7142 11 14 ( 319 1b8p_A) ( 2180 1hdc_A) 0.9977 0.6468 4.9687 ( 0 24 55) 0 0.9977 0.6468 11 17 ( 319 1b8p_A) ( 2189 1hdo_A) 0.9082 0.6665 4.3945 ( 0 21 45) 0 0.9943 0.7321 11 15 ( 319 1b8p_A) ( 2194 1het_A) 0.9086 0.6666 3.7058 ( 0 20 45) 0 0.9947 0.7322 11 15 ( 319 1b8p_A) ( 2270 1hrd_A) 0.7636 0.5529 6.4239 ( 1 11 36) 0 0.7636 0.5529 11 16 ( 319 1b8p_A) ( 2309 1hwx_A) 0.5454 0.3529 4.8357 ( 0 3 15) 0 0.8039 0.5277 11 17 ( 319 1b8p_A) ( 2316 1hxh_A) 0.9917 0.6862 4.8036 ( 1 25 55) 0 0.9959 0.6869 11 16 ( 319 1b8p_A) ( 2328 1hye_A) 0.9998 0.9998 2.5496 ( 0 33 55) 0 0.9998 0.9998 11 11 ( 319 1b8p_A) ( 2330 1hyh_A) 0.9978 0.9978 2.3272 ( 1 33 55) 0 0.9978 0.9978 11 11 ( 319 1b8p_A) ( 2368 1i24_A) 0.9990 0.4074 3.9866 ( 0 28 55) 0 0.9990 0.4074 11 27 ( 319 1b8p_A) ( 2376 1i36_A) 0.9034 0.6654 3.1195 ( 1 23 45) 0 0.9086 0.6666 11 15 ( 319 1b8p_A) ( 2463 1id1_A) 0.9960 0.8444 3.9617 ( 1 30 55) 0 0.9960 0.8444 11 13 ( 319 1b8p_A) ( 2615 1iuk_A) 0.8068 0.7426 4.9147 ( 1 17 36) 0 0.9000 0.8274 11 12 ( 319 1b8p_A) ( 2657 1iy8_A) 0.9973 0.6468 5.1540 ( 0 23 55) 0 0.9973 0.6468 11 17 ( 319 1b8p_A) ( 2674 1iz0_A) 0.9084 0.6665 4.1654 ( 0 21 45) 0 0.9144 0.7121 11 15 ( 319 1b8p_A) ( 2725 1j3v_A) 0.9042 0.7128 3.2005 ( 1 24 45) 0 0.9082 0.7140 11 14 ( 319 1b8p_A) ( 2736 1j5p_A) 0.7271 0.7998 3.7174 ( 0 10 28) 0 0.8175 0.8990 11 10 ( 319 1b8p_A) ( 2781 1ja9_A) 0.9979 0.6468 4.8635 ( 0 25 55) 0 0.9979 0.6468 11 17 ( 319 1b8p_A) ( 2789 1jax_A) 0.9970 0.5498 3.0453 ( 1 31 55) 0 0.9970 0.5498 11 20 ( 319 1b8p_A) ( 3017 1jqb_A) 0.9085 0.6665 4.0330 ( 0 20 45) 0 0.9869 0.7305 11 15 ( 319 1b8p_A) ( 3059 1jtv_A) 0.9972 0.6109 5.2037 ( 0 27 55) 0 0.9972 0.6109 11 18 ( 319 1b8p_A) ( 3072 1jvb_A) 0.8180 0.6922 3.1249 ( 0 18 36) 0 0.9066 0.7681 11 13 ( 319 1b8p_A) ( 3144 1k2w_A) 0.9978 0.6468 4.9233 ( 0 28 55) 0 0.9978 0.6468 11 17 ( 319 1b8p_A) ( 3192 1k6j_A) 0.9988 0.4583 4.1955 ( 0 23 55) 0 0.9988 0.4583 11 24 ( 319 1b8p_A) ( 3257 1kbz_A) 0.5454 0.3158 4.3992 ( 0 6 15) 0 0.9844 0.5779 11 19 ( 319 1b8p_A) ( 3385 1kol_A) 0.9031 0.6241 3.8240 ( 1 23 45) 0 0.9918 0.6862 11 16 ( 319 1b8p_A) ( 3414 1ks9_A) 0.8175 0.5293 4.7145 ( 0 18 36) 0 0.8175 0.5293 11 17 ( 319 1b8p_A) ( 3481 1kyq_A) 0.6653 0.7084 4.4179 ( 1 9 28) 0 0.6653 0.7084 11 10 ( 319 1b8p_A) ( 3561 1l7d_A) 0.7102 0.5296 4.5783 ( 1 13 28) 0 0.8170 0.5998 11 15 ( 319 1b8p_A) ( 3593 1lc0_A) 0.7887 0.7304 3.7549 ( 1 13 36) 0 0.7887 0.7409 11 12 ( 319 1b8p_A) ( 3606 1ldn_A) 0.9972 0.9149 2.1693 ( 1 31 55) 0 0.9972 0.9149 11 12 ( 319 1b8p_A) ( 3610 1leh_A) 0.6362 0.5384 4.7788 ( 0 4 21) 0 0.7262 0.6149 11 13 ( 319 1b8p_A) ( 3633 1li4_A) 0.5453 0.4615 5.6567 ( 0 4 15) 0 0.8175 0.6920 11 13 ( 319 1b8p_A) ( 3637 1lj8_A) 0.9080 0.4999 4.6781 ( 0 26 45) 0 0.9080 0.4999 11 20 ( 319 1b8p_A) ( 3677 1lnq_A) 0.9958 0.6107 3.6995 ( 1 29 55) 0 0.9958 0.6107 11 18 ( 319 1b8p_A) ( 3722 1lss_A) 0.9956 0.9138 3.9539 ( 1 29 55) 0 0.9956 0.9138 11 12 ( 319 1b8p_A) ( 3724 1lsu_A) 0.9952 0.9136 3.7667 ( 1 28 55) 0 0.9952 0.9136 11 12 ( 319 1b8p_A) ( 3734 1lu9_A) 0.9078 0.7139 4.8305 ( 0 21 45) 0 0.9084 0.7141 11 14 ( 319 1b8p_A) ( 3854 1m66_A) 0.9973 0.6871 3.5984 ( 1 33 55) 0 0.9973 0.6871 11 16 ( 319 1b8p_A) ( 4047 1mv8_A) 0.9996 0.6470 3.2905 ( 0 32 55) 0 0.9996 0.6470 11 17 ( 319 1b8p_A) ( 4067 1mx3_A) 0.8177 0.6427 4.2283 ( 0 17 36) 0 0.9850 0.7811 11 14 ( 319 1b8p_A) ( 4131 1n5d_A) 0.9986 0.6469 4.3543 ( 0 23 55) 0 0.9986 0.6469 11 17 ( 319 1b8p_A) ( 4341 1np3_A) 0.9681 0.6432 3.9578 ( 2 33 55) 0 0.9959 0.6466 11 17 ( 319 1b8p_A) ( 4351 1npy_A) 0.6363 0.5384 3.2743 ( 0 9 21) 0 0.9922 0.8427 11 13 ( 319 1b8p_A) ( 4404 1nvm_B) 0.8180 0.7499 3.2566 ( 0 14 36) 0 0.9059 0.8312 11 12 ( 319 1b8p_A) ( 4409 1nvt_A) 0.8181 0.7499 2.8124 ( 0 20 36) 0 0.9051 0.8308 11 12 ( 319 1b8p_A) ( 4417 1nwc_A) 0.7272 0.7272 3.1832 ( 0 12 28) 0 0.9886 0.9886 11 11 ( 319 1b8p_A) ( 4430 1nxq_A) 0.9930 0.6105 4.9960 ( 1 27 55) 0 0.9935 0.6106 11 18 ( 319 1b8p_A) ( 4447 1nyt_A) 0.9090 0.7692 2.7679 ( 0 22 45) 0 0.9090 0.7692 11 13 ( 319 1b8p_A) ( 4499 1o5i_A) 0.9973 0.6467 5.1725 ( 0 21 55) 0 0.9973 0.6467 11 17 ( 319 1b8p_A) ( 4520 1o6z_A) 0.9978 0.9978 2.4132 ( 1 33 55) 0 0.9978 0.9978 11 11 ( 319 1b8p_A) ( 4549 1o89_A) 0.8179 0.6922 3.7834 ( 0 18 36) 0 0.9887 0.8412 11 13 ( 319 1b8p_A) ( 4573 1oaa ) 0.9982 0.6872 4.6350 ( 0 19 55) 0 0.9982 0.6872 11 16 ( 319 1b8p_A) ( 4585 1obb_A) 0.9971 0.8449 2.8734 ( 1 31 55) 0 0.9971 0.8449 11 13 ( 319 1b8p_A) ( 4588 1obf_O) 0.8179 0.7498 3.8878 ( 0 20 36) 0 0.9074 0.8323 11 12 ( 319 1b8p_A) ( 4668 1oi7_A) 0.9088 0.9996 3.2441 ( 0 22 45) 0 0.9088 0.9996 11 10 ( 319 1b8p_A) ( 4730 1ono_A) 0.7455 0.6999 4.4194 ( 1 10 36) 0 0.9834 0.9058 11 12 ( 319 1b8p_A) ( 4739 1ooe_A) 0.9080 0.7140 4.6045 ( 0 21 45) 0 0.9938 0.7838 11 14 ( 319 1b8p_A) ( 4765 1orr_A) 0.9903 0.4229 4.0550 ( 1 23 55) 0 0.9903 0.4229 11 26 ( 319 1b8p_A) ( 4863 1p1j_A) 0.8150 0.3599 6.9389 ( 0 17 36) 0 0.8160 0.3600 11 25 ( 319 1b8p_A) ( 4943 1p9l_A) 0.8180 0.8180 3.2078 ( 0 14 36) 0 0.9920 0.9920 11 11 ( 319 1b8p_A) ( 5029 1pjq_A) 0.7271 0.7997 3.7946 ( 0 11 28) 0 0.7271 0.7997 11 10 ( 319 1b8p_A) ( 5045 1pl7_A) 0.9039 0.7670 3.9612 ( 1 24 45) 0 0.9058 0.7678 11 13 ( 319 1b8p_A) ( 5082 1pqw_A) 0.9980 0.6872 4.7877 ( 0 24 55) 0 0.9980 0.6872 11 16 ( 319 1b8p_A) ( 5097 1psd_A) 0.6125 0.5675 4.3930 ( 1 10 21) 0 0.9854 0.9071 11 12 ( 319 1b8p_A) ( 5140 1px0_A) 0.9032 0.6241 4.8563 ( 1 24 45) 0 0.9943 0.6866 11 16 ( 319 1b8p_A) ( 5227 1q7c_A) 0.9973 0.6109 5.1546 ( 0 25 55) 0 0.9973 0.6109 11 18 ( 319 1b8p_A) ( 5362 1qki_A) 0.9079 0.8326 4.7037 ( 0 20 45) 0 0.9079 0.8326 11 12 ( 319 1b8p_A) ( 5387 1qmg_A) 0.9955 0.5787 4.6776 ( 1 31 55) 0 0.9978 0.5788 11 19 ( 319 1b8p_A) ( 5406 1qor_A) 0.9987 0.8456 4.2944 ( 0 32 55) 0 0.9987 0.8456 11 13 ( 319 1b8p_A) ( 5409 1qp8_A) 0.6363 0.5384 3.0694 ( 0 10 21) 0 0.9079 0.7687 11 13 ( 319 1b8p_A) ( 5444 1qsg_A) 0.9919 0.6104 5.2105 ( 1 26 55) 0 0.9922 0.6104 11 18 ( 319 1b8p_A) ( 5493 1qyc_A) 0.9984 0.4583 4.5159 ( 0 28 55) 0 0.9984 0.4583 11 24 ( 319 1b8p_A) ( 5571 1r6d_A) 0.9943 0.4582 4.0662 ( 1 27 55) 0 0.9943 0.4582 11 24 ( 319 1b8p_A) ( 5654 1rjw_A) 0.9086 0.6666 3.7013 ( 0 22 45) 0 0.9086 0.6666 11 15 ( 319 1b8p_A) ( 5665 1rkx_A) 0.9949 0.5236 4.1163 ( 1 28 55) 0 0.9949 0.5236 11 21 ( 319 1b8p_A) ( 5786 1say_A) 0.9014 0.8284 4.7326 ( 1 22 45) 0 0.9070 0.8481 11 12 ( 319 1b8p_A) ( 5838 1spx_A) 0.9974 0.6468 5.1264 ( 0 23 55) 0 0.9974 0.6468 11 17 ( 319 1b8p_A) ( 5877 1t2d_A) 0.9967 0.9967 2.8727 ( 1 30 55) 0 0.9967 0.9967 11 11 ( 319 1b8p_A) ( 5942 1u8x_X) 0.9999 0.9166 2.3043 ( 0 30 55) 0 0.9999 0.9166 11 12 ( 319 1b8p_A) ( 5954 1uay_A) 0.9075 0.6248 5.0745 ( 0 19 45) 0 0.9913 0.6861 11 16 ( 319 1b8p_A) ( 6085 1ur5_A) 0.9978 0.9152 2.3814 ( 1 33 55) 0 0.9978 0.9152 11 12 ( 319 1b8p_A) ( 6114 1uuf_A) 0.8460 0.6932 4.4364 ( 2 24 45) 0 0.9896 0.7826 11 14 ( 319 1b8p_A) ( 6257 1vi2_A) 0.9043 0.7672 2.7905 ( 1 24 45) 0 0.9047 0.7673 11 13 ( 319 1b8p_A) ( 6274 1vj0_A) 0.9085 0.6249 3.9401 ( 0 22 45) 0 0.9085 0.6249 11 16 ( 319 1b8p_A) ( 6276 1vj1_A) 0.9029 0.7124 4.1841 ( 1 23 45) 0 0.9029 0.7124 11 14 ( 319 1b8p_A) ( 6292 1vjp_A) 0.8090 0.6401 4.6848 ( 1 18 36) 0 0.8160 0.6422 11 14 ( 319 1b8p_A) ( 6341 1xcb_A) 0.6363 0.8748 3.2032 ( 0 9 21) 0 0.6363 0.8748 11 8 ( 319 1b8p_A) ( 6388 2ae1 ) 0.9974 0.6468 5.1411 ( 0 23 55) 0 0.9974 0.6468 11 17 ( 319 1b8p_A) ( 6420 2cmd ) 0.9975 0.9150 2.4222 ( 1 32 55) 0 0.9975 0.9150 11 12 ( 319 1b8p_A) ( 6426 2dap ) 0.9086 0.9992 3.8460 ( 0 20 45) 0 0.9086 0.9992 11 10 ( 319 1b8p_A) ( 6497 2nac_A) 0.7992 0.6838 6.1695 ( 1 15 36) 0 0.8939 0.7625 11 13 ( 319 1b8p_A) ( 6505 2pgd ) 0.9086 0.7141 3.8482 ( 0 24 45) 0 0.9086 0.7141 11 14 ( 319 1b8p_A) ( 6627 6ldh ) 0.9996 0.8460 3.1000 ( 0 32 55) 0 0.9996 0.8460 11 13 -------------------------------------------------------------------------------------------------------------------------