------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 1189 1ek6_A) ( 42 1a4i_A) 0.2273 0.4999 5.0166 ( 0 1 10) 0 0.3944 0.7993 22 10 ( 1189 1ek6_A) ( 265 1b16_A) 0.5909 0.8124 3.1059 ( 0 42 78) 0 0.5909 0.8124 22 16 ( 1189 1ek6_A) ( 312 1b7g_O) 0.4545 0.7689 4.2426 ( 0 21 45) 0 0.4997 0.8425 22 13 ( 1189 1ek6_A) ( 319 1b8p_A) 0.4999 0.9981 4.7266 ( 0 27 55) 0 0.4999 0.9981 22 11 ( 1189 1ek6_A) ( 352 1bdb ) 0.5909 0.7221 3.4632 ( 0 42 78) 0 0.5909 0.7221 22 18 ( 1189 1ek6_A) ( 377 1bg6 ) 0.4192 0.4422 5.4837 ( 9 42 66) 0 0.4545 0.5555 22 18 ( 1189 1ek6_A) ( 506 1c1d_A) 0.2727 0.4999 5.4107 ( 0 0 15) 0 0.4090 0.7482 22 12 ( 1189 1ek6_A) ( 707 1cyd_A) 0.5908 0.7220 3.9527 ( 0 39 78) 0 0.6100 0.7220 22 18 ( 1189 1ek6_A) ( 781 1db3_A) 0.8175 0.8175 3.4571 ( 3 111 153) 0 0.8591 0.8591 22 22 ( 1189 1ek6_A) ( 847 1dih ) 0.3182 0.9992 3.8652 ( 0 4 21) 0 0.3182 0.9995 22 7 ( 1189 1ek6_A) ( 873 1dlj_A) 0.2273 0.3125 2.8678 ( 0 2 10) 0 0.5283 0.6792 22 16 ( 1189 1ek6_A) ( 906 1dpg_A) 0.5454 0.9224 4.0038 ( 0 35 66) 0 0.5454 0.9224 22 13 ( 1189 1ek6_A) ( 972 1dxy ) 0.3182 0.4374 7.0155 ( 0 7 21) 0 0.5322 0.6934 22 16 ( 1189 1ek6_A) ( 1053 1e6u_A) 0.8678 0.8678 3.5489 ( 11 149 190) 0 0.8678 0.8678 22 22 ( 1189 1ek6_A) ( 1071 1e7w_A) 0.5909 0.7645 3.6113 ( 0 41 78) 0 0.6016 0.7645 22 17 ( 1189 1ek6_A) ( 1094 1ebf_A) 0.2727 0.4999 5.8146 ( 0 4 15) 0 0.4532 0.8074 22 12 ( 1189 1ek6_A) ( 1117 1edz_A) 0.2727 0.4999 4.9220 ( 0 3 15) 0 0.4413 0.7409 22 12 ( 1189 1ek6_A) ( 1189 1ek6_A) 1.0000 1.0000 0.0000 ( 0 189 231) 0 1.0000 1.0000 22 22 ( 1189 1ek6_A) ( 1219 1enp ) 0.6274 0.7544 4.0181 ( 4 52 91) 0 0.6274 0.7544 22 18 ( 1189 1ek6_A) ( 1221 1eny ) 0.6268 0.7909 3.7053 ( 4 51 91) 0 0.6268 0.7909 22 17 ( 1189 1ek6_A) ( 1242 1eq2_A) 0.8347 0.8347 3.4660 ( 9 126 171) 0 0.8599 0.8599 22 22 ( 1189 1ek6_A) ( 1355 1f14_A) 0.2273 0.3333 5.1167 ( 0 1 10) 0 0.4982 0.7213 22 15 ( 1189 1ek6_A) ( 1436 1f8f_A) 0.3636 0.5714 3.3772 ( 0 10 28) 0 0.5357 0.7854 22 14 ( 1189 1ek6_A) ( 1487 1ff9_A) 0.6241 0.8622 4.9806 ( 4 48 91) 0 0.6241 0.8658 22 15 ( 1189 1ek6_A) ( 1531 1fjh_A) 0.5000 0.6874 3.2571 ( 0 25 55) 0 0.5453 0.7493 22 16 ( 1189 1ek6_A) ( 1560 1fmc_A) 0.6222 0.7766 3.9288 ( 4 46 91) 0 0.6222 0.7766 22 17 ( 1189 1ek6_A) ( 1804 1gdh_A) 0.2727 0.4286 3.8385 ( 0 6 15) 0 0.5433 0.8374 22 14 ( 1189 1ek6_A) ( 1807 1gee_A) 0.6320 0.6931 3.7248 ( 3 47 91) 0 0.6320 0.6931 22 20 ( 1189 1ek6_A) ( 1809 1geg_A) 0.5909 0.7645 3.7613 ( 0 42 78) 0 0.6341 0.8155 22 17 ( 1189 1ek6_A) ( 1899 1gpj_A) 0.3182 0.5833 4.2141 ( 0 8 21) 0 0.4998 0.9124 22 12 ( 1189 1ek6_A) ( 1922 1gr0_A) 0.5451 0.8542 4.5567 ( 1 27 66) 0 0.5451 0.8542 22 14 ( 1189 1ek6_A) ( 1948 1gtm_A) 0.2727 0.3750 4.6945 ( 0 3 15) 0 0.4544 0.6245 22 16 ( 1189 1ek6_A) ( 1956 1gu7_A) 0.2727 0.3529 3.7438 ( 0 5 15) 0 0.5888 0.7571 22 17 ( 1189 1ek6_A) ( 2004 1gy8_A) 0.9545 0.9130 1.1915 ( 2 166 210) 0 0.9545 0.9130 22 23 ( 1189 1ek6_A) ( 2016 1gz3_A) 0.3182 0.4117 4.7099 ( 0 5 21) 0 0.4999 0.6468 22 17 ( 1189 1ek6_A) ( 2017 1gz6_A) 0.5908 0.6499 3.8869 ( 0 39 78) 0 0.6271 0.6853 22 20 ( 1189 1ek6_A) ( 2046 1h2b_A) 0.3636 0.5714 3.3319 ( 0 12 28) 0 0.5447 0.8504 22 14 ( 1189 1ek6_A) ( 2090 1h5q_A) 0.6260 0.6837 3.8374 ( 4 50 91) 0 0.6260 0.6837 22 20 ( 1189 1ek6_A) ( 2095 1h6d_A) 0.5085 0.6525 7.3905 ( 4 29 66) 0 0.5085 0.7851 22 14 ( 1189 1ek6_A) ( 2180 1hdc_A) 0.6353 0.8198 3.9379 ( 2 46 91) 0 0.6353 0.8198 22 17 ( 1189 1ek6_A) ( 2189 1hdo_A) 0.6363 0.9330 3.4039 ( 0 60 91) 0 0.6363 0.9330 22 15 ( 1189 1ek6_A) ( 2194 1het_A) 0.3636 0.5333 3.4429 ( 0 9 28) 0 0.5449 0.7964 22 15 ( 1189 1ek6_A) ( 2270 1hrd_A) 0.2727 0.3750 4.1580 ( 0 3 15) 0 0.4530 0.6173 22 16 ( 1189 1ek6_A) ( 2309 1hwx_A) 0.2727 0.3529 4.7007 ( 0 3 15) 0 0.4716 0.5878 22 17 ( 1189 1ek6_A) ( 2316 1hxh_A) 0.6354 0.8703 4.0381 ( 2 47 91) 0 0.6354 0.8703 22 16 ( 1189 1ek6_A) ( 2328 1hye_A) 0.4999 0.9984 4.5442 ( 0 28 55) 0 0.4999 0.9984 22 11 ( 1189 1ek6_A) ( 2330 1hyh_A) 0.4998 0.9943 4.5852 ( 1 28 55) 0 0.4998 0.9943 22 11 ( 1189 1ek6_A) ( 2368 1i24_A) 0.9897 0.8111 3.0406 ( 8 178 231) 0 0.9897 0.8111 22 27 ( 1189 1ek6_A) ( 2376 1i36_A) 0.3410 0.3572 8.2458 ( 8 29 55) 0 0.5423 0.7795 22 15 ( 1189 1ek6_A) ( 2463 1id1_A) 0.5000 0.8458 3.8520 ( 0 28 55) 0 0.5000 0.8458 22 13 ( 1189 1ek6_A) ( 2615 1iuk_A) 0.4081 0.7302 4.6088 ( 1 13 36) 0 0.4545 0.8317 22 12 ( 1189 1ek6_A) ( 2657 1iy8_A) 0.5909 0.7646 3.3239 ( 0 41 78) 0 0.6340 0.8153 22 17 ( 1189 1ek6_A) ( 2674 1iz0_A) 0.3636 0.5333 3.2583 ( 0 11 28) 0 0.5454 0.7993 22 15 ( 1189 1ek6_A) ( 2725 1j3v_A) 0.3182 0.4999 5.6708 ( 0 6 21) 0 0.4434 0.6415 22 14 ( 1189 1ek6_A) ( 2736 1j5p_A) 0.4091 0.8994 4.0196 ( 0 12 36) 0 0.4517 0.8994 22 10 ( 1189 1ek6_A) ( 2781 1ja9_A) 0.5909 0.7646 3.1869 ( 0 43 78) 0 0.6163 0.7646 22 17 ( 1189 1ek6_A) ( 2789 1jax_A) 0.2273 0.2500 2.9595 ( 0 2 10) 0 0.4995 0.5492 22 20 ( 1189 1ek6_A) ( 3017 1jqb_A) 0.3636 0.5333 3.0864 ( 0 12 28) 0 0.5000 0.7331 22 15 ( 1189 1ek6_A) ( 3059 1jtv_A) 0.5909 0.7221 3.3842 ( 0 43 78) 0 0.6355 0.7754 22 18 ( 1189 1ek6_A) ( 3072 1jvb_A) 0.2727 0.4613 7.5010 ( 0 3 15) 0 0.4997 0.8427 22 13 ( 1189 1ek6_A) ( 3144 1k2w_A) 0.6355 0.8206 4.0111 ( 2 49 91) 0 0.6355 0.8206 22 17 ( 1189 1ek6_A) ( 3192 1k6j_A) 0.8016 0.7494 4.2563 ( 11 124 171) 0 0.8016 0.7494 22 24 ( 1189 1ek6_A) ( 3257 1kbz_A) 0.8162 0.9433 3.5879 ( 4 108 153) 0 0.8162 0.9433 22 19 ( 1189 1ek6_A) ( 3385 1kol_A) 0.3182 0.4375 4.0956 ( 0 10 21) 0 0.5453 0.7495 22 16 ( 1189 1ek6_A) ( 3414 1ks9_A) 0.2727 0.3529 5.9280 ( 0 2 15) 0 0.3758 0.4110 22 17 ( 1189 1ek6_A) ( 3481 1kyq_A) 0.3613 0.7086 3.2319 ( 1 9 28) 0 0.3613 0.7086 22 10 ( 1189 1ek6_A) ( 3561 1l7d_A) 0.2727 0.4000 5.1346 ( 0 6 15) 0 0.4545 0.6661 22 15 ( 1189 1ek6_A) ( 3593 1lc0_A) 0.4760 0.6722 6.2655 ( 3 22 55) 0 0.5380 0.9062 22 12 ( 1189 1ek6_A) ( 3606 1ldn_A) 0.4998 0.9131 4.4347 ( 1 28 55) 0 0.4998 0.9131 22 12 ( 1189 1ek6_A) ( 3610 1leh_A) 0.2727 0.4614 5.9325 ( 0 1 15) 0 0.4543 0.7657 22 13 ( 1189 1ek6_A) ( 3633 1li4_A) 0.2727 0.4615 5.0316 ( 0 2 15) 0 0.4995 0.8390 22 13 ( 1189 1ek6_A) ( 3637 1lj8_A) 0.4739 0.4981 6.9868 ( 7 41 66) 0 0.4739 0.4993 22 20 ( 1189 1ek6_A) ( 3677 1lnq_A) 0.5440 0.6626 4.2885 ( 2 34 66) 0 0.5440 0.6626 22 18 ( 1189 1ek6_A) ( 3722 1lss_A) 0.5000 0.9161 3.8483 ( 0 28 55) 0 0.5000 0.9161 22 12 ( 1189 1ek6_A) ( 3724 1lsu_A) 0.4998 0.9132 3.6340 ( 1 27 55) 0 0.5000 0.9158 22 12 ( 1189 1ek6_A) ( 3734 1lu9_A) 0.3636 0.5714 3.7102 ( 0 11 28) 0 0.4999 0.7852 22 14 ( 1189 1ek6_A) ( 3854 1m66_A) 0.3252 0.3330 6.1250 ( 11 37 66) 0 0.4997 0.6860 22 16 ( 1189 1ek6_A) ( 4047 1mv8_A) 0.4253 0.4460 5.8628 ( 10 46 78) 0 0.4999 0.6466 22 17 ( 1189 1ek6_A) ( 4067 1mx3_A) 0.2925 0.3670 7.7354 ( 2 8 21) 0 0.5453 0.8561 22 14 ( 1189 1ek6_A) ( 4131 1n5d_A) 0.6354 0.8200 3.3880 ( 2 46 91) 0 0.6354 0.8200 22 17 ( 1189 1ek6_A) ( 4341 1np3_A) 0.2727 0.3529 3.5010 ( 0 6 15) 0 0.4545 0.5880 22 17 ( 1189 1ek6_A) ( 4351 1npy_A) 0.3636 0.6152 4.8660 ( 0 13 28) 0 0.4998 0.8434 22 13 ( 1189 1ek6_A) ( 4404 1nvm_B) 0.4545 0.8328 4.2156 ( 0 19 45) 0 0.5000 0.9159 22 12 ( 1189 1ek6_A) ( 4409 1nvt_A) 0.3636 0.6664 4.7062 ( 0 12 28) 0 0.4972 0.8659 22 12 ( 1189 1ek6_A) ( 4417 1nwc_A) 0.2727 0.5454 4.2724 ( 0 2 15) 0 0.4999 0.9984 22 11 ( 1189 1ek6_A) ( 4430 1nxq_A) 0.6355 0.7755 4.0420 ( 2 49 91) 0 0.6355 0.7755 22 18 ( 1189 1ek6_A) ( 4447 1nyt_A) 0.3182 0.5384 4.3253 ( 0 9 21) 0 0.5432 0.8944 22 13 ( 1189 1ek6_A) ( 4499 1o5i_A) 0.6349 0.8181 4.5588 ( 2 42 91) 0 0.6349 0.8181 22 17 ( 1189 1ek6_A) ( 4520 1o6z_A) 0.4998 0.9942 4.6754 ( 1 28 55) 0 0.4998 0.9942 22 11 ( 1189 1ek6_A) ( 4549 1o89_A) 0.3182 0.5384 3.2720 ( 0 10 21) 0 0.5338 0.8451 22 13 ( 1189 1ek6_A) ( 4573 1oaa ) 0.5909 0.8123 3.5194 ( 0 37 78) 0 0.6569 0.8742 22 16 ( 1189 1ek6_A) ( 4585 1obb_A) 0.5408 0.8669 4.1511 ( 3 38 66) 0 0.5408 0.8669 22 13 ( 1189 1ek6_A) ( 4588 1obf_O) 0.4545 0.8327 4.5259 ( 0 24 45) 0 0.4804 0.8327 22 12 ( 1189 1ek6_A) ( 4668 1oi7_A) 0.4545 0.9995 3.4515 ( 0 22 45) 0 0.4545 0.9995 22 10 ( 1189 1ek6_A) ( 4730 1ono_A) 0.4091 0.7498 3.9336 ( 0 13 36) 0 0.4996 0.9087 22 12 ( 1189 1ek6_A) ( 4739 1ooe_A) 0.5780 0.8307 4.5287 ( 4 43 78) 0 0.5816 0.8567 22 14 ( 1189 1ek6_A) ( 4765 1orr_A) 0.9533 0.8072 3.0458 ( 4 151 210) 0 0.9533 0.8072 22 26 ( 1189 1ek6_A) ( 4863 1p1j_A) 0.4999 0.4400 4.8084 ( 0 26 55) 0 0.4999 0.4400 22 25 ( 1189 1ek6_A) ( 4943 1p9l_A) 0.5000 0.9992 3.8194 ( 0 28 55) 0 0.5000 0.9992 22 11 ( 1189 1ek6_A) ( 5029 1pjq_A) 0.4081 0.8544 3.5479 ( 1 13 36) 0 0.4081 0.8544 22 10 ( 1189 1ek6_A) ( 5045 1pl7_A) 0.3636 0.6153 3.3549 ( 0 11 28) 0 0.5453 0.9208 22 13 ( 1189 1ek6_A) ( 5082 1pqw_A) 0.3636 0.5000 3.7975 ( 0 9 28) 0 0.5482 0.7493 22 16 ( 1189 1ek6_A) ( 5097 1psd_A) 0.3182 0.5831 5.2198 ( 0 8 21) 0 0.4999 0.9150 22 12 ( 1189 1ek6_A) ( 5140 1px0_A) 0.4320 0.4576 5.6992 ( 10 47 78) 0 0.5452 0.7489 22 16 ( 1189 1ek6_A) ( 5227 1q7c_A) 0.5914 0.6752 4.1587 ( 6 50 91) 0 0.6161 0.7273 22 18 ( 1189 1ek6_A) ( 5362 1qki_A) 0.4998 0.9116 4.4339 ( 1 25 55) 0 0.4998 0.9116 22 12 ( 1189 1ek6_A) ( 5387 1qmg_A) 0.3181 0.3683 7.8358 ( 0 10 21) 1 0.4528 0.4948 22 19 ( 1189 1ek6_A) ( 5406 1qor_A) 0.3636 0.6153 3.7839 ( 0 12 28) 0 0.5903 0.9912 22 13 ( 1189 1ek6_A) ( 5409 1qp8_A) 0.2727 0.4615 5.3513 ( 0 3 15) 0 0.5450 0.9173 22 13 ( 1189 1ek6_A) ( 5444 1qsg_A) 0.5909 0.7221 3.6792 ( 0 44 78) 0 0.6333 0.7695 22 18 ( 1189 1ek6_A) ( 5493 1qyc_A) 0.8157 0.7484 5.1185 ( 4 112 153) 0 0.8157 0.7484 22 24 ( 1189 1ek6_A) ( 5571 1r6d_A) 0.9967 0.9145 2.1707 ( 6 178 231) 0 0.9967 0.9145 22 24 ( 1189 1ek6_A) ( 5654 1rjw_A) 0.3636 0.5333 3.5898 ( 0 12 28) 0 0.5453 0.7988 22 15 ( 1189 1ek6_A) ( 5665 1rkx_A) 0.8143 0.8522 2.5820 ( 5 110 153) 0 0.8175 0.8563 22 21 ( 1189 1ek6_A) ( 5786 1say_A) 0.3182 0.5833 4.0064 ( 0 9 21) 0 0.4998 0.9116 22 12 ( 1189 1ek6_A) ( 5838 1spx_A) 0.5909 0.7646 3.3559 ( 0 39 78) 0 0.6075 0.7646 22 17 ( 1189 1ek6_A) ( 5877 1t2d_A) 0.4998 0.9951 3.9128 ( 1 28 55) 0 0.4998 0.9951 22 11 ( 1189 1ek6_A) ( 5942 1u8x_X) 0.5443 0.9778 4.8668 ( 2 37 66) 0 0.5443 0.9778 22 12 ( 1189 1ek6_A) ( 5954 1uay_A) 0.5908 0.8118 4.2322 ( 1 41 78) 0 0.5908 0.8118 22 16 ( 1189 1ek6_A) ( 6085 1ur5_A) 0.4998 0.9132 4.3205 ( 1 28 55) 0 0.4998 0.9132 22 12 ( 1189 1ek6_A) ( 6114 1uuf_A) 0.3182 0.4999 5.3559 ( 0 5 21) 0 0.5451 0.8536 22 14 ( 1189 1ek6_A) ( 6257 1vi2_A) 0.3636 0.6152 4.6916 ( 0 12 28) 0 0.5364 0.8451 22 13 ( 1189 1ek6_A) ( 6274 1vj0_A) 0.3636 0.5000 3.2211 ( 0 12 28) 0 0.5125 0.6874 22 16 ( 1189 1ek6_A) ( 6276 1vj1_A) 0.3636 0.5714 3.9528 ( 0 12 28) 0 0.5452 0.8550 22 14 ( 1189 1ek6_A) ( 6292 1vjp_A) 0.5454 0.8562 4.7970 ( 0 30 66) 0 0.5454 0.8562 22 14 ( 1189 1ek6_A) ( 6341 1xcb_A) 0.3182 0.8741 4.6523 ( 0 8 21) 0 0.3543 0.8742 22 8 ( 1189 1ek6_A) ( 6388 2ae1 ) 0.5909 0.7646 3.5164 ( 0 39 78) 0 0.6123 0.7646 22 17 ( 1189 1ek6_A) ( 6420 2cmd ) 0.5169 0.7205 4.8235 ( 5 39 66) 0 0.5169 0.9130 22 12 ( 1189 1ek6_A) ( 6426 2dap ) 0.4545 0.9988 4.2475 ( 0 21 45) 0 0.4545 0.9988 22 10 ( 1189 1ek6_A) ( 6497 2nac_A) 0.3182 0.5384 3.9795 ( 0 8 21) 0 0.4995 0.8395 22 13 ( 1189 1ek6_A) ( 6505 2pgd ) 0.2727 0.4285 5.6799 ( 0 2 15) 0 0.4543 0.7119 22 14 ( 1189 1ek6_A) ( 6627 6ldh ) 0.4999 0.8454 4.6959 ( 0 27 55) 0 0.4999 0.8454 22 13 -------------------------------------------------------------------------------------------------------------------------