------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 1484 1feu_A) ( 827 1dfu_P) 0.5333 0.8887 2.8546 ( 0 22 28) 0 0.5333 0.8887 15 9 ( 1484 1feu_A) ( 1484 1feu_A) 1.0000 1.0000 0.0000 ( 0 88 105) 0 1.0000 1.0000 15 15 ( 1484 1feu_A) ( 1950 1gtr_A) 0.4658 0.5366 5.2769 ( 1 16 21) 0 0.4658 0.5366 15 13 -------------------------------------------------------------------------------------------------------------------------