------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 5087 1prt_B) ( 11 1a0i ) 0.7495 0.9977 4.9391 ( 0 11 15) 0 0.7495 0.9977 8 6 ( 5087 1prt_B) ( 49 1a62 ) 0.4998 0.5711 6.3344 ( 0 4 6) 0 0.4999 0.5713 8 7 ( 5087 1prt_B) ( 161 1an8 ) 0.6731 0.6416 4.5281 ( 2 15 21) 0 0.6731 0.6416 8 9 ( 5087 1prt_B) ( 285 1b3q_A) 0.4998 0.3077 6.6234 ( 0 2 6) 0 0.4998 0.3077 8 13 ( 5087 1prt_B) ( 315 1b8a_A) 0.8441 0.7601 3.7948 ( 1 14 21) 0 0.8441 0.7601 8 9 ( 5087 1prt_B) ( 415 1bkb ) 0.4529 0.5283 7.9900 ( 1 6 6) 0 0.4529 0.5283 8 6 ( 5087 1prt_B) ( 452 1br9 ) 0.6245 0.3125 6.2127 ( 0 5 10) 0 0.6245 0.3125 8 16 ( 5087 1prt_B) ( 475 1bvs_A) 0.8546 0.9617 5.7436 ( 1 16 21) 0 0.8546 0.9617 8 7 ( 5087 1prt_B) ( 528 1c4q_A) 0.7237 0.8088 3.3351 ( 1 12 15) 0 0.7237 0.8088 8 7 ( 5087 1prt_B) ( 620 1ckm_A) 0.3670 0.3790 7.5585 ( 1 4 6) 0 0.4999 0.5713 8 7 ( 5087 1prt_B) ( 683 1cuk ) 0.7495 0.9981 4.7315 ( 0 11 15) 0 0.7495 0.9981 8 6 ( 5087 1prt_B) ( 766 1d7q_A) 0.4999 0.6664 4.9086 ( 0 4 6) 0 0.4999 0.6664 8 6 ( 5087 1prt_B) ( 833 1dgs_A) 0.2394 0.2396 7.1640 ( 5 12 15) 1 0.2394 0.2396 8 7 ( 5087 1prt_B) ( 1002 1e1o_A) 0.8440 0.6296 4.0531 ( 1 14 21) 0 0.8440 0.6296 8 11 ( 5087 1prt_B) ( 1081 1e9g_A) 0.7230 0.3328 5.6950 ( 1 12 15) 0 0.7230 0.3328 8 18 ( 5087 1prt_B) ( 1217 1enf_A) 0.5774 0.5774 4.1654 ( 1 8 10) 0 0.5774 0.5774 8 8 ( 5087 1prt_B) ( 1228 1eov_A) 0.8440 0.7600 4.2056 ( 1 14 21) 0 0.8440 0.7600 8 9 ( 5087 1prt_B) ( 1256 1et9_A) 0.6999 0.6999 4.4895 ( 1 10 15) 0 0.6999 0.6999 8 8 ( 5087 1prt_B) ( 1262 1eu3_A) 0.4996 0.5707 7.3820 ( 0 4 6) 0 0.4999 0.5713 8 7 ( 5087 1prt_B) ( 1285 1ewi_A) 0.6246 0.8318 5.6146 ( 0 7 10) 0 0.6246 0.8318 8 6 ( 5087 1prt_B) ( 1499 1fgu_A) 0.4999 0.4444 5.7969 ( 0 4 6) 0 0.4999 0.4444 8 9 ( 5087 1prt_B) ( 1500 1fgu_A) 0.8734 0.6360 5.3570 ( 0 13 21) 0 0.8734 0.6360 8 11 ( 5087 1prt_B) ( 1527 1fjg_Q) 0.6247 0.8322 5.1966 ( 0 7 10) 0 0.6247 0.8322 8 6 ( 5087 1prt_B) ( 1542 1fl0_A) 0.6794 0.5284 5.0177 ( 1 9 15) 0 0.6794 0.5284 8 11 ( 5087 1prt_B) ( 1610 1fr3_A) 0.3848 0.3948 5.3692 ( 2 8 10) 0 0.3848 0.3948 8 6 ( 5087 1prt_B) ( 1638 1fvi_A) 0.7135 0.7914 5.5294 ( 1 11 15) 0 0.7135 0.7914 8 7 ( 5087 1prt_B) ( 1696 1g29_1) 0.4997 0.6653 7.1921 ( 0 4 6) 0 0.5773 0.6857 8 6 ( 5087 1prt_B) ( 1800 1gd7_A) 0.6496 0.5599 5.6466 ( 1 8 15) 0 0.6496 0.5599 8 10 ( 5087 1prt_B) ( 1870 1gm5_A) 0.8439 0.6296 4.3175 ( 1 14 21) 0 0.8439 0.6296 8 11 ( 5087 1prt_B) ( 1886 1go3_E) 0.6248 0.6248 4.9677 ( 0 7 10) 0 0.6248 0.6248 8 8 ( 5087 1prt_B) ( 1895 1gpc ) 0.8177 0.4638 7.5046 ( 1 12 21) 0 0.8177 0.4638 8 15 ( 5087 1prt_B) ( 1958 1gug_A) 0.3671 0.3880 4.8066 ( 1 4 6) 0 0.3671 0.3880 8 6 ( 5087 1prt_B) ( 1978 1gvp ) 0.4995 0.4995 8.1741 ( 0 4 6) 0 0.4995 0.4995 8 8 ( 5087 1prt_B) ( 2149 1h9k_A) 0.3670 0.3790 7.0864 ( 1 4 6) 0 0.3670 0.3790 8 7 ( 5087 1prt_B) ( 2150 1h9s_A) 0.3671 0.3790 5.9173 ( 1 4 6) 0 0.3671 0.3790 8 7 ( 5087 1prt_B) ( 2212 1hh2_P) 0.6244 0.8306 6.5019 ( 0 7 10) 0 0.6244 0.8306 8 6 ( 5087 1prt_B) ( 2382 1i40_A) 0.4998 0.3636 6.3201 ( 0 4 6) 0 0.4998 0.3856 8 11 ( 5087 1prt_B) ( 2384 1i4g_A) 0.5773 0.5272 4.4595 ( 1 8 10) 0 0.5773 0.5272 8 9 ( 5087 1prt_B) ( 2396 1i50_H) 0.4999 0.4444 5.5913 ( 0 5 6) 0 0.4999 0.4444 8 9 ( 5087 1prt_B) ( 2652 1ixr_A) 0.7494 0.9974 5.1287 ( 0 10 15) 0 0.7494 0.9974 8 6 ( 5087 1prt_B) ( 2664 1iyj_B) 0.7487 0.6660 6.1100 ( 0 10 15) 0 0.7487 0.6660 8 9 ( 5087 1prt_B) ( 2665 1iyj_B) 0.5000 0.6665 4.0144 ( 0 4 6) 0 0.5000 0.6665 8 6 ( 5087 1prt_B) ( 2667 1iyj_B) 0.7001 0.5820 3.4334 ( 1 10 15) 0 0.7001 0.5820 8 10 ( 5087 1prt_B) ( 2801 1jb3_A) 0.5526 0.4719 4.8686 ( 1 7 10) 0 0.5526 0.4719 8 10 ( 5087 1prt_B) ( 2802 1jb7_A) 0.7497 0.6665 4.2307 ( 0 12 15) 0 0.7497 0.6665 8 9 ( 5087 1prt_B) ( 2803 1jb7_A) 0.6248 0.5554 4.8083 ( 0 7 10) 0 0.6248 0.5554 8 9 ( 5087 1prt_B) ( 2804 1jb7_A) 0.7487 0.4285 6.1739 ( 0 10 15) 0 0.7487 0.4285 8 14 ( 5087 1prt_B) ( 2805 1jb7_B) 0.6248 0.3846 4.9077 ( 0 7 10) 0 0.6248 0.3846 8 13 ( 5087 1prt_B) ( 2835 1je5_A) 0.4995 0.3998 7.9319 ( 0 4 6) 0 0.4995 0.3998 8 10 ( 5087 1prt_B) ( 2927 1jjc_B) 0.5000 0.5714 4.0436 ( 0 3 6) 0 0.5000 0.5714 8 7 ( 5087 1prt_B) ( 2935 1jjg_A) 0.4999 0.6662 5.4003 ( 0 2 6) 0 0.4999 0.6662 8 6 ( 5087 1prt_B) ( 3054 1jt8_A) 0.7494 0.8561 4.9744 ( 0 10 15) 0 0.7494 0.8561 8 7 ( 5087 1prt_B) ( 3118 1k0r_A) nil ( 5087 1prt_B) ( 3121 1k0s_A) 0.4991 0.3332 9.3201 ( 0 3 6) 0 0.4994 0.3671 8 12 ( 5087 1prt_B) ( 3341 1kl9_A) 0.4201 0.3418 8.9733 ( 1 5 6) 0 0.4201 0.3418 8 11 ( 5087 1prt_B) ( 3509 1l0w_A) 0.8558 0.7669 4.3985 ( 1 16 21) 0 0.8558 0.7669 8 9 ( 5087 1prt_B) ( 3515 1l1o_C) 0.8506 0.4655 4.5302 ( 1 15 21) 0 0.8506 0.4655 8 15 ( 5087 1prt_B) ( 3726 1ltl_A) 0.5773 0.2494 5.0787 ( 1 8 10) 0 0.5773 0.2494 8 20 ( 5087 1prt_B) ( 3742 1luz_A) 0.7138 0.8768 4.9762 ( 1 11 15) 0 0.7138 0.8768 8 6 ( 5087 1prt_B) ( 3836 1m4v_A) 0.8509 0.7641 3.9576 ( 1 15 21) 0 0.8509 0.7641 8 9 ( 5087 1prt_B) ( 4180 1n9w_A) 0.7001 0.7001 3.5820 ( 1 10 15) 0 0.7001 0.7001 8 8 ( 5087 1prt_B) ( 4330 1nnx_A) 0.7000 0.7000 4.2519 ( 1 10 15) 0 0.7000 0.7000 8 8 ( 5087 1prt_B) ( 4539 1o7i_A) 0.9818 0.8786 5.4849 ( 1 20 28) 0 0.9818 0.8786 8 9 ( 5087 1prt_B) ( 4738 1oo9_B) 0.6246 0.5553 5.8057 ( 0 7 10) 0 0.6246 0.5553 8 9 ( 5087 1prt_B) ( 4821 1oxx_K) 0.4997 0.3636 6.9131 ( 0 5 6) 0 0.7140 0.5375 8 11 ( 5087 1prt_B) ( 4859 1p16_A) 0.7139 0.5873 4.6407 ( 1 11 15) 0 0.7139 0.5873 8 10 ( 5087 1prt_B) ( 4996 1pfs_A) 0.7132 0.8753 6.0612 ( 1 11 15) 0 0.7132 0.8753 8 6 ( 5087 1prt_B) ( 5087 1prt_B) 1.0000 1.0000 0.0000 ( 0 23 28) 0 1.0000 1.0000 8 8 ( 5087 1prt_B) ( 5088 1prt_D) 0.8919 0.8919 4.8579 ( 2 23 28) 0 0.8919 0.8919 8 8 ( 5087 1prt_B) ( 5089 1prt_F) 0.8564 0.9649 2.7729 ( 1 16 21) 0 0.8564 0.9649 8 7 ( 5087 1prt_B) ( 5144 1pxf_A) 0.5525 0.5525 5.3682 ( 1 7 10) 0 0.5525 0.5525 8 8 ( 5087 1prt_B) ( 5148 1pyb_A) 0.7490 0.7490 5.7799 ( 0 7 15) 0 0.7490 0.7490 8 8 ( 5087 1prt_B) ( 5171 1q12_A) 0.4999 0.4444 4.8090 ( 0 4 6) 0 0.4999 0.4444 8 9 ( 5087 1prt_B) ( 5276 1qb5_D) 0.8564 0.8564 2.5796 ( 1 16 21) 0 0.8564 0.8564 8 8 ( 5087 1prt_B) ( 5460 1quq_A) 0.7001 0.5340 3.1959 ( 1 10 15) 0 0.7001 0.5340 8 11 ( 5087 1prt_B) ( 5461 1quq_B) 0.5160 0.5160 5.7342 ( 2 11 15) 0 0.5160 0.5160 8 8 ( 5087 1prt_B) ( 5468 1qvc_A) 0.8337 0.8337 5.4691 ( 1 13 21) 0 0.8337 0.8337 8 8 ( 5087 1prt_B) ( 5505 1qzg_A) 0.8507 0.5362 4.4680 ( 1 15 21) 0 0.8507 0.5362 8 13 ( 5087 1prt_B) ( 5765 1s40_A) 0.7001 0.6372 3.5950 ( 1 10 15) 0 0.7001 0.6372 8 9 ( 5087 1prt_B) ( 5844 1sr3_A) 0.2910 0.2970 5.1792 ( 1 3 6) 0 0.2910 0.2970 8 6 ( 5087 1prt_B) ( 5854 1sty ) 0.5160 0.5000 5.4301 ( 2 11 15) 0 0.5160 0.5000 8 9 ( 5087 1prt_B) ( 5951 1uap_A) 0.6247 0.5554 5.5588 ( 0 7 10) 0 0.6247 0.5554 8 9 ( 5087 1prt_B) ( 5982 1ue1_A) 0.8441 0.6893 3.8850 ( 1 14 21) 0 0.8441 0.6893 8 10 ( 5087 1prt_B) ( 6560 3chb_D) 0.8563 0.8563 3.0384 ( 1 16 21) 0 0.8563 0.8563 8 8 ( 5087 1prt_B) ( 6596 3seb ) 0.7140 0.7140 4.1077 ( 1 11 15) 0 0.7140 0.7140 8 8 ( 5087 1prt_B) ( 6601 3tss ) 0.5527 0.5527 3.0668 ( 1 7 10) 0 0.5527 0.5527 8 8 ( 5087 1prt_B) ( 6603 3ull_A) 0.8718 0.8718 6.3862 ( 0 13 21) 0 0.8718 0.8718 8 8 -------------------------------------------------------------------------------------------------------------------------