------------------------------------------------------------------------------------------------------------------------- Will print the top 5 alignments (based on backbone shifts) for each pairing of chains, as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: score1 [score2] pairings L2ERR {Xbad/Xsig:Xtot} Breaks (score2 is the score from protein2's perspective, not the minimum of the two perspectives as in some earlier printouts.) Recall that "SIMILARITY" refers to similarities over all alignments not just the top ones. ------------------------------------------------------------------------------------------------------------------------- [2803, 11]: Comparing 1jb7_A and 1a0i, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 29 (8 H + 21 S) secondary structure elements in 1a0i, of which 6 satisfy the size requirements. 2.25071 [ 1.50238] ((16 . 22) (19 . 23) (21 . 24) (22 . 25)) 6.775 {0/5:6} B:0 5.05062 [ 5.01023] ((19 . 22) (20 . 23) (21 . 24) (22 . 25)) 8.219 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.4443 [and 1/min{score2}: 0.6656] [2803, 49]: Comparing 1jb7_A and 1a62, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 10 (5 H + 5 S) secondary structure elements in 1a62, of which 7 satisfy the size requirements. 1.80016 [ 1.40035] ((16 . 4) (17 . 5) (18 . 7) (19 . 9) (21 . 10)) 3.984 {0/9:10} B:0 1.80022 [ 1.40047] ((16 . 4) (17 . 5) (18 . 7) (19 . 9) (20 . 10)) 4.287 {0/10:10} B:0 2.25048 [ 1.75103] ((16 . 5) (17 . 7) (18 . 9) (19 . 10)) 6.162 {0/6:6} B:0 2.25199 [ 1.75423] ((18 . 4) (19 . 5) (20 . 7) (22 . 8)) 8.786 {0/6:6} B:0 4.09712 [ 4.03673] ((18 . 4) (19 . 5) (21 . 9) (22 . 8)) 10.044 {2/5:6} B:1 SIMILARITY (1/min{score1}): 0.5555 [and 1/min{score2}: 0.7141] [2803, 161]: Comparing 1jb7_A and 1an8, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 22 (6 H + 16 S) secondary structure elements in 1an8, of which 9 satisfy the size requirements. 1.50013 [ 1.50013] ((16 . 3) (17 . 4) (18 . 6) (19 . 8) (20 . 9) (21 . 10)) 3.273 {0/12:15} B:0 1.50100 [ 1.50100] ((16 . 2) (17 . 4) (18 . 6) (19 . 8) (20 . 9) (21 . 10)) 5.452 {0/10:15} B:0 1.80037 [ 1.80037] ((16 . 3) (17 . 4) (18 . 6) (19 . 8) (20 . 10)) 4.865 {0/9:10} B:0 2.25023 [ 2.25023] ((17 . 3) (18 . 4) (19 . 6) (20 . 8)) 5.095 {0/5:6} B:0 3.49469 [ 3.49469] ((15 . 7) (16 . 8) (17 . 9) (18 . 10)) 8.154 {2/6:6} B:0 SIMILARITY (1/min{score1}): 0.6666 [and 1/min{score2}: 0.6666] [2803, 285]: Comparing 1jb7_A and 1b3q_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 33 (14 H + 19 S) secondary structure elements in 1b3q_A, of which 13 satisfy the size requirements. 2.25007 [ 3.25002] ((17 . 24) (18 . 25) (19 . 27) (20 . 28)) 3.806 {0/5:6} B:0 2.25013 [ 3.25004] ((17 . 24) (18 . 25) (19 . 27) (21 . 28)) 4.454 {0/5:6} B:0 2.25031 [ 3.25010] ((16 . 22) (18 . 25) (19 . 27) (20 . 28)) 5.521 {0/4:6} B:0 2.25052 [ 3.25017] ((16 . 23) (17 . 24) (18 . 25) (19 . 27)) 6.270 {0/6:6} B:0 2.25057 [ 3.25019] ((17 . 23) (18 . 24) (19 . 25) (20 . 27)) 6.424 {0/6:6} B:0 SIMILARITY (1/min{score1}): 0.5555 [and 1/min{score2}: 0.3846] [2803, 315]: Comparing 1jb7_A and 1b8a_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 35 (15 H + 20 S) secondary structure elements in 1b8a_A, of which 9 satisfy the size requirements. 1.50049 [ 1.50049] ((16 . 3) (17 . 5) (18 . 6) (19 . 8) (20 . 9) (21 . 10)) 4.552 {0/12:15} B:0 1.80002 [ 1.80002] ((17 . 5) (18 . 6) (19 . 8) (20 . 9) (21 . 10)) 2.446 {0/8:10} B:0 2.25012 [ 2.25012] ((16 . 4) (19 . 8) (20 . 9) (21 . 10)) 4.373 {0/5:6} B:0 2.25033 [ 2.25033] ((16 . 3) (17 . 5) (18 . 6) (21 . 9)) 5.613 {0/5:6} B:0 2.25058 [ 2.25058] ((17 . 4) (18 . 5) (19 . 6) (20 . 8)) 6.440 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.6665 [and 1/min{score2}: 0.6665] [2803, 415]: Comparing 1jb7_A and 1bkb, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 15 (3 H + 12 S) secondary structure elements in 1bkb, of which 6 satisfy the size requirements. 1.80017 [ 1.20059] ((16 . 9) (17 . 10) (18 . 11) (19 . 14) (20 . 15)) 4.043 {0/10:10} B:0 2.25031 [ 1.50103] ((17 . 9) (18 . 10) (19 . 11) (20 . 14)) 5.496 {0/6:6} B:0 2.25049 [ 1.50166] ((16 . 10) (17 . 11) (18 . 14) (19 . 15)) 6.191 {0/6:6} B:0 2.25148 [ 1.50497] ((18 . 9) (19 . 10) (20 . 11) (22 . 13)) 8.151 {0/6:6} B:0 SIMILARITY (1/min{score1}): 0.5555 [and 1/min{score2}: 0.8329] [2803, 452]: Comparing 1jb7_A and 1br9, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 18 (7 H + 11 S) secondary structure elements in 1br9, of which 16 satisfy the size requirements. 1.50032 [ 2.66672] ((16 . 2) (17 . 4) (18 . 5) (19 . 7) (20 . 8) (21 . 9)) 4.109 {0/13:15} B:0 1.80016 [ 3.20003] ((17 . 4) (18 . 5) (19 . 7) (20 . 8) (21 . 9)) 3.975 {0/8:10} B:0 1.80308 [ 3.20055] ((16 . 2) (17 . 7) (18 . 9) (19 . 13) (21 . 17)) 8.288 {0/8:10} B:0 2.25051 [ 4.00009] ((16 . 4) (17 . 5) (18 . 7) (19 . 8)) 6.257 {0/5:6} B:0 2.25065 [ 4.00012] ((17 . 7) (18 . 9) (19 . 13) (21 . 17)) 6.629 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.6665 [and 1/min{score2}: 0.3750] [2803, 475]: Comparing 1jb7_A and 1bvs_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 18 (11 H + 7 S) secondary structure elements in 1bvs_A, of which 7 satisfy the size requirements. 1.80141 [ 1.40298] ((16 . 2) (17 . 3) (18 . 4) (19 . 7) (20 . 8)) 6.811 {0/7:10} B:0 2.25095 [ 1.75201] ((16 . 3) (17 . 4) (18 . 7) (19 . 8)) 7.295 {0/4:6} B:0 1.50238 [ 1.17170] ((16 . 2) (17 . 3) (18 . 4) (19 . 7) (20 . 8) (21 . 1)) 6.778 {0/11:15} B:1 5.05062 [ 5.01878] ((17 . 2) (18 . 3) (20 . 8) (21 . 7)) 8.115 {2/4:6} B:1 SIMILARITY (1/min{score1}): 0.6656 [and 1/min{score2}: 0.8535] [2803, 528]: Comparing 1jb7_A and 1c4q_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 8 (1 H + 7 S) secondary structure elements in 1c4q_A, of which 7 satisfy the size requirements. 1.80030 [ 1.40063] ((16 . 2) (17 . 3) (18 . 4) (19 . 6) (21 . 8)) 4.610 {0/8:10} B:0 2.25012 [ 1.75026] ((16 . 2) (17 . 3) (18 . 4) (19 . 6)) 4.365 {0/5:6} B:0 2.25030 [ 1.75063] ((16 . 1) (17 . 3) (18 . 4) (19 . 6)) 5.450 {0/5:6} B:0 2.25030 [ 1.75063] ((17 . 2) (18 . 3) (19 . 4) (20 . 6)) 5.465 {0/5:6} B:0 2.25060 [ 1.75127] ((16 . 3) (17 . 4) (18 . 6) (19 . 8)) 6.507 {0/5:6} B:0 SIMILARITY (1/min{score1}): 0.5555 [and 1/min{score2}: 0.7140] [2803, 620]: Comparing 1jb7_A and 1ckm_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 27 (7 H + 20 S) secondary structure elements in 1ckm_A, of which 7 satisfy the size requirements. 1.80126 [ 1.40267] ((16 . 21) (17 . 22) (18 . 23) (19 . 24) (20 . 25)) 6.622 {0/10:10} B:0 5.05078 [ 5.01895] ((16 . 21) (17 . 22) (18 . 23) (22 . 27)) 9.991 {3/6:6} B:0 6.68825 [ 6.67463] ((18 . 21) (20 . 24) (21 . 25) (23 . 27)) 8.395 {4/6:6} B:0 1.86243 [ 1.52267] ((15 . 26) (16 . 21) (17 . 22) (19 . 24) (20 . 25)) 5.026 {1/9:10} B:1 6.01228 [ 6.00461] ((16 . 22) (18 . 21) (19 . 25) (20 . 24) (23 . 27)) 9.823 {6/10:10} B:2 SIMILARITY (1/min{score1}): 0.5552 [and 1/min{score2}: 0.7129] [2803, 683]: Comparing 1jb7_A and 1cuk, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 14 (9 H + 5 S) secondary structure elements in 1cuk, of which 6 satisfy the size requirements. 1.80012 [ 1.20042] ((16 . 1) (17 . 2) (18 . 3) (19 . 5) (20 . 6)) 3.711 {0/10:10} B:0 2.25028 [ 1.50094] ((17 . 1) (18 . 2) (19 . 3) (20 . 5)) 5.375 {0/6:6} B:0 2.25049 [ 1.50164] ((16 . 2) (17 . 3) (18 . 5) (19 . 6)) 6.177 {0/6:6} B:0 SIMILARITY (1/min{score1}): 0.5555 [and 1/min{score2}: 0.8330] [2803, 766]: Comparing 1jb7_A and 1d7q_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 7 (2 H + 5 S) secondary structure elements in 1d7q_A, of which 6 satisfy the size requirements. 1.80025 [ 1.20085] ((16 . 1) (17 . 2) (18 . 3) (19 . 5) (20 . 6)) 4.435 {0/10:10} B:0 2.25039 [ 1.50132] ((16 . 2) (17 . 3) (18 . 5) (19 . 6)) 5.850 {0/6:6} B:0 SIMILARITY (1/min{score1}): 0.5555 [and 1/min{score2}: 0.8327] [2803, 833]: Comparing 1jb7_A and 1dgs_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 44 (25 H + 19 S) secondary structure elements in 1dgs_A, of which 7 satisfy the size requirements. 1.80030 [ 1.40064] ((16 . 24) (17 . 26) (18 . 27) (19 . 29) (20 . 30)) 4.634 {0/9:10} B:0 2.25014 [ 1.75030] ((16 . 24) (17 . 26) (18 . 27) (21 . 30)) 4.530 {0/5:6} B:0 2.25028 [ 1.75059] ((16 . 26) (17 . 27) (18 . 29) (19 . 30)) 5.358 {0/5:6} B:0 2.25050 [ 1.75107] ((18 . 24) (19 . 26) (20 . 27) (22 . 28)) 6.224 {0/5:6} B:0 2.25098 [ 1.75207] ((16 . 25) (17 . 26) (18 . 27) (19 . 29)) 7.348 {0/5:6} B:0 SIMILARITY (1/min{score1}): 0.5555 [and 1/min{score2}: 0.7140] [2803, 1002]: Comparing 1jb7_A and 1e1o_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 39 (18 H + 21 S) secondary structure elements in 1e1o_A, of which 11 satisfy the size requirements. 1.30397 [ 1.58155] ((15 . 2) (16 . 4) (17 . 7) (18 . 8) (19 . 10) (20 . 11) (21 . 12)) 4.448 {1/16:21} B:0 2.25025 [ 2.75014] ((16 . 6) (19 . 10) (20 . 11) (21 . 12)) 5.232 {0/5:6} B:0 2.25034 [ 2.75018] ((16 . 7) (17 . 8) (18 . 10) (19 . 11)) 5.627 {0/5:6} B:0 2.40375 [ 2.83884] ((15 . 9) (16 . 10) (17 . 11) (18 . 12)) 7.168 {1/6:6} B:0 2.83622 [ 3.13237] ((15 . 3) (17 . 7) (18 . 8) (19 . 10)) 5.740 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.7669 [and 1/min{score2}: 0.6323] [2803, 1081]: Comparing 1jb7_A and 1e9g_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 29 (8 H + 21 S) secondary structure elements in 1e9g_A, of which 18 satisfy the size requirements. 1.80097 [ 3.60012] ((16 . 5) (17 . 6) (18 . 7) (19 . 11) (21 . 14)) 6.205 {0/8:10} B:0 2.25003 [ 4.50000] ((16 . 5) (17 . 11) (18 . 14) (19 . 15)) 3.177 {0/5:6} B:0 2.25072 [ 4.50009] ((16 . 11) (17 . 14) (18 . 15) (22 . 21)) 6.808 {0/5:6} B:0 2.25114 [ 4.50014] ((16 . 6) (17 . 7) (18 . 11) (21 . 15)) 7.643 {0/5:6} B:0 2.54257 [ 4.54370] ((16 . 4) (17 . 5) (18 . 6) (20 . 11)) 10.161 {1/5:6} B:0 SIMILARITY (1/min{score1}): 0.5553 [and 1/min{score2}: 0.2778] [2803, 1217]: Comparing 1jb7_A and 1enf_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 24 (7 H + 17 S) secondary structure elements in 1enf_A, of which 8 satisfy the size requirements. 1.50041 [ 1.33392] ((16 . 3) (17 . 5) (18 . 7) (19 . 9) (20 . 11) (21 . 12)) 4.375 {0/11:15} B:0 2.25059 [ 2.00084] ((16 . 5) (17 . 7) (18 . 9) (19 . 11)) 6.475 {0/4:6} B:0 2.25092 [ 2.00131] ((17 . 3) (18 . 5) (19 . 7) (20 . 9)) 7.238 {0/4:6} B:0 3.49486 [ 3.43705] ((15 . 8) (16 . 9) (17 . 11) (18 . 12)) 8.951 {2/6:6} B:0 5.72841 [ 5.72316] ((16 . 7) (17 . 5) (18 . 3) (19 . 11) (20 . 9)) 8.601 {4/7:10} B:3 SIMILARITY (1/min{score1}): 0.6665 [and 1/min{score2}: 0.7497] [2803, 1228]: Comparing 1jb7_A and 1eov_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 36 (17 H + 19 S) secondary structure elements in 1eov_A, of which 9 satisfy the size requirements. 1.50045 [ 1.50045] ((16 . 4) (17 . 6) (18 . 7) (19 . 9) (20 . 10) (21 . 11)) 4.469 {0/13:15} B:0 2.25024 [ 2.25024] ((16 . 5) (17 . 6) (18 . 7) (19 . 9)) 5.156 {0/3:6} B:0 2.25064 [ 2.25064] ((16 . 4) (17 . 6) (18 . 7) (21 . 10)) 6.623 {0/5:6} B:0 2.40408 [ 2.40408] ((15 . 8) (16 . 9) (17 . 10) (18 . 11)) 7.886 {1/6:6} B:0 3.49501 [ 3.49501] ((18 . 1) (20 . 4) (21 . 5) (23 . 8)) 9.457 {2/6:6} B:0 SIMILARITY (1/min{score1}): 0.6665 [and 1/min{score2}: 0.6665] [2803, 1256]: Comparing 1jb7_A and 1et9_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 19 (5 H + 14 S) secondary structure elements in 1et9_A, of which 8 satisfy the size requirements. 1.80025 [ 1.60036] ((16 . 3) (17 . 4) (18 . 5) (19 . 7) (20 . 8)) 4.429 {0/7:10} B:0 2.25017 [ 2.00024] ((16 . 3) (17 . 4) (18 . 5) (19 . 7)) 4.713 {0/4:6} B:0 2.25036 [ 2.00052] ((16 . 4) (17 . 5) (18 . 7) (19 . 8)) 5.737 {0/4:6} B:0 2.25096 [ 2.00137] ((16 . 4) (17 . 5) (18 . 7) (19 . 9)) 7.320 {0/4:6} B:0 2.25104 [ 2.00148] ((17 . 3) (18 . 4) (19 . 5) (20 . 7)) 7.466 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.5555 [and 1/min{score2}: 0.6249] [2803, 1262]: Comparing 1jb7_A and 1eu3_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 23 (5 H + 18 S) secondary structure elements in 1eu3_A, of which 7 satisfy the size requirements. 1.80108 [ 1.40229] ((17 . 5) (18 . 6) (19 . 8) (20 . 10) (21 . 11)) 6.375 {0/6:10} B:0 2.25009 [ 1.75019] ((18 . 6) (19 . 8) (20 . 10) (21 . 11)) 4.034 {0/4:6} B:0 2.25035 [ 1.75074] ((18 . 5) (19 . 6) (20 . 8) (21 . 9)) 5.682 {0/4:6} B:0 2.25264 [ 1.75558] ((16 . 5) (17 . 6) (18 . 8) (19 . 10)) 9.422 {0/4:6} B:0 4.31876 [ 4.29796] ((16 . 6) (18 . 5) (19 . 10) (20 . 8) (21 . 9)) 6.625 {3/7:10} B:2 SIMILARITY (1/min{score1}): 0.5552 [and 1/min{score2}: 0.7131] [2803, 1285]: Comparing 1jb7_A and 1ewi_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 8 (3 H + 5 S) secondary structure elements in 1ewi_A, of which 6 satisfy the size requirements. 1.95753 [ 1.58175] ((15 . 1) (16 . 2) (17 . 3) (19 . 7) (20 . 8)) 6.097 {1/7:10} B:0 2.25042 [ 1.50143] ((16 . 2) (17 . 3) (19 . 7) (20 . 8)) 5.969 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.5108 [and 1/min{score2}: 0.6660] [2803, 1499]: Comparing 1jb7_A and 1fgu_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 22 (6 H + 16 S) secondary structure elements in 1fgu_A, of which 9 satisfy the size requirements. 1.50069 [ 1.50069] ((16 . 2) (17 . 4) (18 . 5) (19 . 7) (20 . 10) (21 . 11)) 4.967 {0/13:15} B:0 1.80034 [ 1.80034] ((17 . 4) (18 . 5) (19 . 7) (20 . 10) (21 . 11)) 4.787 {0/8:10} B:0 2.25133 [ 2.25133] ((18 . 4) (19 . 5) (20 . 7) (21 . 8)) 7.947 {0/4:6} B:0 2.25278 [ 2.25278] ((16 . 3) (17 . 4) (18 . 5) (19 . 7)) 9.546 {0/5:6} B:0 2.54118 [ 2.54118] ((15 . 6) (16 . 8) (17 . 10) (18 . 11)) 8.275 {1/5:6} B:0 SIMILARITY (1/min{score1}): 0.6664 [and 1/min{score2}: 0.6664] [2803, 1500]: Comparing 1jb7_A and 1fgu_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 22 (6 H + 16 S) secondary structure elements in 1fgu_A, of which 11 satisfy the size requirements. 1.13322 [ 1.37953] ((15 . 12) (16 . 13) (17 . 15) (18 . 16) (19 . 18) (20 . 20) (21 . 21) (22 . 22)) 4.177 {1/22:28} B:0 2.25089 [ 2.75049] ((18 . 15) (19 . 16) (20 . 18) (21 . 19)) 7.178 {0/4:6} B:0 2.25112 [ 2.75062] ((15 . 12) (19 . 15) (20 . 16) (23 . 22)) 7.612 {0/4:6} B:0 2.25177 [ 2.75097] ((18 . 13) (19 . 15) (20 . 16) (23 . 22)) 8.523 {0/5:6} B:0 3.49503 [ 3.66678] ((19 . 13) (20 . 15) (21 . 16) (22 . 17)) 9.552 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.8824 [and 1/min{score2}: 0.7249] [2803, 1527]: Comparing 1jb7_A and 1fjg_Q, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 6 (1 H + 5 S) secondary structure elements in 1fjg_Q, of which 6 satisfy the size requirements. 1.53346 [ 1.10055] ((16 . 1) (17 . 2) (18 . 3) (19 . 4) (21 . 5) (22 . 6)) 9.355 {1/13:15} B:0 2.25155 [ 1.50521] ((16 . 2) (17 . 3) (18 . 4) (19 . 5)) 8.252 {0/4:6} B:0 4.09683 [ 4.01991] ((16 . 2) (17 . 1) (18 . 4) (21 . 3)) 8.337 {2/5:6} B:2 SIMILARITY (1/min{score1}): 0.6521 [and 1/min{score2}: 0.9086] [2803, 1542]: Comparing 1jb7_A and 1fl0_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 19 (3 H + 16 S) secondary structure elements in 1fl0_A, of which 11 satisfy the size requirements. 1.95821 [ 2.29273] ((16 . 3) (17 . 4) (18 . 5) (19 . 7) (20 . 12)) 7.225 {1/7:10} B:0 2.25005 [ 2.75003] ((16 . 2) (17 . 4) (18 . 5) (19 . 7)) 3.547 {0/5:6} B:0 2.25012 [ 2.75007] ((17 . 11) (18 . 12) (19 . 14) (21 . 15)) 4.346 {0/4:6} B:0 2.25043 [ 2.75023] ((17 . 3) (18 . 4) (19 . 5) (20 . 7)) 5.981 {0/5:6} B:0 2.25058 [ 2.75032] ((16 . 4) (17 . 5) (18 . 7) (20 . 11)) 6.447 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.5107 [and 1/min{score2}: 0.4362] [2803, 1610]: Comparing 1jb7_A and 1fr3_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 7 (2 H + 5 S) secondary structure elements in 1fr3_A, of which 6 satisfy the size requirements. 2.25042 [ 1.50140] ((17 . 1) (18 . 2) (19 . 3) (20 . 5)) 5.935 {0/5:6} B:0 6.02946 [ 6.00587] ((16 . 2) (18 . 1) (19 . 3) (20 . 5)) 5.763 {3/5:6} B:1 SIMILARITY (1/min{score1}): 0.4444 [and 1/min{score2}: 0.6660] [2803, 1638]: Comparing 1jb7_A and 1fvi_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 23 (8 H + 15 S) secondary structure elements in 1fvi_A, of which 7 satisfy the size requirements. 1.80016 [ 1.40034] ((16 . 17) (17 . 18) (18 . 19) (19 . 22) (21 . 23)) 3.953 {0/9:10} B:0 1.80020 [ 1.40042] ((16 . 17) (17 . 18) (18 . 19) (19 . 22) (20 . 23)) 4.177 {0/10:10} B:0 2.25007 [ 1.75015] ((16 . 17) (17 . 18) (18 . 19) (21 . 23)) 3.794 {0/6:6} B:0 2.25052 [ 1.75110] ((16 . 18) (17 . 19) (18 . 22) (19 . 23)) 6.268 {0/6:6} B:0 2.25104 [ 1.75220] ((17 . 17) (18 . 18) (19 . 19) (21 . 22)) 7.462 {0/5:6} B:0 SIMILARITY (1/min{score1}): 0.5555 [and 1/min{score2}: 0.7141] [2803, 1696]: Comparing 1jb7_A and 1g29_1, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 38 (15 H + 23 S) secondary structure elements in 1g29_1, of which 6 satisfy the size requirements. 2.25015 [ 1.50050] ((16 . 26) (17 . 27) (18 . 28) (19 . 30)) 4.580 {0/5:6} B:0 2.25039 [ 1.50130] ((17 . 26) (19 . 28) (20 . 30) (21 . 32)) 5.825 {0/5:6} B:0 2.25043 [ 1.50143] ((16 . 26) (19 . 27) (21 . 28) (22 . 29)) 5.970 {0/5:6} B:0 5.05058 [ 5.01019] ((19 . 26) (20 . 27) (21 . 28) (22 . 29)) 7.421 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.4444 [and 1/min{score2}: 0.6664] [2803, 1800]: Comparing 1jb7_A and 1gd7_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 12 (3 H + 9 S) secondary structure elements in 1gd7_A, of which 10 satisfy the size requirements. 2.25027 [ 2.50020] ((17 . 2) (18 . 3) (19 . 5) (20 . 7)) 5.346 {0/5:6} B:0 2.25077 [ 2.50056] ((17 . 2) (18 . 3) (19 . 5) (21 . 7)) 6.919 {0/4:6} B:0 2.25191 [ 2.50140] ((16 . 5) (17 . 7) (19 . 11) (20 . 12)) 8.698 {0/4:6} B:0 2.54043 [ 2.72432] ((16 . 3) (17 . 5) (18 . 7) (19 . 9)) 6.189 {1/5:6} B:0 2.83659 [ 2.97350] ((16 . 3) (17 . 5) (18 . 7) (19 . 11)) 7.588 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.5262 [and 1/min{score2}: 0.4819] [2803, 1870]: Comparing 1jb7_A and 1gm5_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 46 (28 H + 18 S) secondary structure elements in 1gm5_A, of which 11 satisfy the size requirements. 1.80057 [ 2.20031] ((16 . 10) (17 . 12) (18 . 13) (19 . 15) (21 . 16)) 5.423 {0/9:10} B:0 2.25105 [ 2.75058] ((17 . 11) (18 . 12) (19 . 13) (20 . 15)) 7.492 {0/5:6} B:0 SIMILARITY (1/min{score1}): 0.5554 [and 1/min{score2}: 0.4545] [2803, 1886]: Comparing 1jb7_A and 1go3_E, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 18 (4 H + 14 S) secondary structure elements in 1go3_E, of which 8 satisfy the size requirements. 2.25026 [ 2.00037] ((16 . 8) (17 . 9) (18 . 10) (21 . 16)) 5.264 {0/5:6} B:0 2.25108 [ 2.00154] ((16 . 8) (17 . 9) (18 . 10) (19 . 13)) 7.543 {0/5:6} B:0 2.54059 [ 2.37902] ((16 . 8) (19 . 15) (20 . 16) (22 . 18)) 6.800 {1/5:6} B:0 2.83640 [ 2.72445] ((16 . 8) (19 . 15) (21 . 16) (22 . 18)) 6.831 {1/4:6} B:0 4.09682 [ 4.06136] ((16 . 10) (17 . 12) (18 . 13) (19 . 15)) 8.294 {2/5:6} B:0 SIMILARITY (1/min{score1}): 0.4444 [and 1/min{score2}: 0.4999] [2803, 1895]: Comparing 1jb7_A and 1gpc, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 19 (11 H + 8 S) secondary structure elements in 1gpc, of which 15 satisfy the size requirements. 1.50233 [ 2.50050] ((16 . 2) (17 . 9) (18 . 11) (19 . 14) (20 . 15) (23 . 18)) 6.742 {0/14:15} B:0 2.25141 [ 3.75030] ((16 . 11) (19 . 14) (22 . 17) (23 . 18)) 8.055 {0/5:6} B:0 2.25245 [ 3.75053] ((17 . 3) (18 . 4) (21 . 9) (22 . 10)) 9.256 {0/4:6} B:0 2.25260 [ 3.75056] ((16 . 3) (19 . 9) (21 . 11) (22 . 12)) 9.392 {0/4:6} B:0 2.25352 [ 3.75076] ((15 . 10) (16 . 11) (22 . 18) (23 . 19)) 10.131 {0/5:6} B:0 SIMILARITY (1/min{score1}): 0.6656 [and 1/min{score2}: 0.3999] [2803, 1958]: Comparing 1jb7_A and 1gug_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 8 (3 H + 5 S) secondary structure elements in 1gug_A, of which 6 satisfy the size requirements. 2.25037 [ 1.50126] ((17 . 1) (18 . 2) (19 . 4) (20 . 6)) 5.781 {0/5:6} B:0 2.25082 [ 1.50275] ((17 . 1) (18 . 2) (19 . 4) (21 . 6)) 7.027 {0/4:6} B:0 6.02946 [ 6.00587] ((16 . 2) (18 . 1) (19 . 4) (20 . 6)) 5.621 {3/5:6} B:1 SIMILARITY (1/min{score1}): 0.4444 [and 1/min{score2}: 0.6661] [2803, 1978]: Comparing 1jb7_A and 1gvp, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 10 (2 H + 8 S) secondary structure elements in 1gvp, of which 8 satisfy the size requirements. 1.80081 [ 1.60116] ((16 . 1) (17 . 4) (18 . 5) (19 . 6) (21 . 10)) 5.938 {0/8:10} B:0 2.25027 [ 2.00039] ((17 . 4) (18 . 5) (19 . 6) (21 . 10)) 5.349 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.5553 [and 1/min{score2}: 0.6245] [2803, 2149]: Comparing 1jb7_A and 1h9k_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 15 (4 H + 11 S) secondary structure elements in 1h9k_A, of which 7 satisfy the size requirements. 2.25007 [ 1.75014] ((16 . 1) (17 . 3) (18 . 4) (19 . 6)) 3.739 {0/5:6} B:0 2.25019 [ 1.75040] ((16 . 2) (17 . 3) (18 . 4) (19 . 6)) 4.868 {0/4:6} B:0 2.25042 [ 1.75089] ((17 . 2) (18 . 3) (19 . 4) (20 . 6)) 5.946 {0/4:6} B:0 2.25082 [ 1.75173] ((17 . 1) (18 . 3) (19 . 4) (20 . 6)) 7.025 {0/5:6} B:0 2.54136 [ 2.24634] ((18 . 1) (19 . 3) (20 . 4) (22 . 5)) 8.607 {1/5:6} B:0 SIMILARITY (1/min{score1}): 0.4444 [and 1/min{score2}: 0.5714] [2803, 2150]: Comparing 1jb7_A and 1h9s_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 15 (5 H + 10 S) secondary structure elements in 1h9s_A, of which 7 satisfy the size requirements. 2.25053 [ 1.75113] ((17 . 1) (18 . 2) (19 . 3) (20 . 5)) 6.311 {0/6:6} B:0 2.40358 [ 2.03430] ((17 . 1) (18 . 2) (19 . 3) (22 . 8)) 6.716 {1/6:6} B:0 3.49441 [ 3.39504] ((17 . 1) (19 . 3) (20 . 5) (22 . 8)) 6.035 {2/6:6} B:0 5.05081 [ 5.01898] ((19 . 1) (20 . 2) (22 . 4) (23 . 8)) 10.203 {3/6:6} B:0 4.47418 [ 4.45548] ((16 . 2) (18 . 1) (19 . 3) (21 . 5) (22 . 8)) 7.494 {4/9:10} B:1 SIMILARITY (1/min{score1}): 0.4443 [and 1/min{score2}: 0.5711] [2803, 2212]: Comparing 1jb7_A and 1hh2_P, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 27 (11 H + 16 S) secondary structure elements in 1hh2_P, of which 6 satisfy the size requirements. 1.80004 [ 1.20012] ((16 . 8) (17 . 9) (18 . 10) (19 . 12) (20 . 14)) 2.737 {0/10:10} B:0 1.80090 [ 1.20302] ((16 . 8) (17 . 9) (18 . 10) (19 . 13) (20 . 14)) 6.087 {0/10:10} B:0 2.25056 [ 1.50189] ((16 . 9) (17 . 10) (18 . 12) (19 . 14)) 6.398 {0/6:6} B:0 6.67552 [ 6.66843] ((16 . 8) (17 . 9) (18 . 10) (19 . 14) (21 . 12)) 5.499 {6/9:10} B:1 SIMILARITY (1/min{score1}): 0.5555 [and 1/min{score2}: 0.8332] [2803, 2382]: Comparing 1jb7_A and 1i40_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 13 (4 H + 9 S) secondary structure elements in 1i40_A, of which 11 satisfy the size requirements. 1.80208 [ 2.20114] ((16 . 5) (17 . 6) (18 . 7) (19 . 9) (22 . 11)) 7.514 {0/10:10} B:0 2.25047 [ 2.75026] ((16 . 2) (17 . 3) (19 . 5) (20 . 6)) 6.114 {0/5:6} B:0 2.25063 [ 2.75035] ((16 . 2) (17 . 3) (18 . 4) (20 . 6)) 6.591 {0/6:6} B:0 2.25107 [ 2.75059] ((16 . 3) (17 . 4) (19 . 6) (20 . 7)) 7.527 {0/6:6} B:0 4.04069 [ 4.08881] ((17 . 5) (18 . 6) (19 . 7) (20 . 9) (23 . 11)) 8.459 {4/10:10} B:0 SIMILARITY (1/min{score1}): 0.5554 [and 1/min{score2}: 0.4604] [2803, 2384]: Comparing 1jb7_A and 1i4g_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 21 (6 H + 15 S) secondary structure elements in 1i4g_A, of which 9 satisfy the size requirements. 1.50052 [ 1.50052] ((16 . 3) (17 . 4) (18 . 5) (19 . 7) (20 . 8) (21 . 9)) 4.623 {0/11:15} B:0 1.80005 [ 1.80005] ((17 . 4) (18 . 5) (19 . 7) (20 . 8) (21 . 9)) 2.931 {0/7:10} B:0 2.25082 [ 2.25082] ((16 . 3) (17 . 4) (18 . 5) (21 . 8)) 7.027 {0/4:6} B:0 2.40711 [ 2.40711] ((15 . 6) (16 . 7) (17 . 8) (18 . 10)) 11.051 {1/6:6} B:0 2.54128 [ 2.54128] ((15 . 6) (16 . 7) (17 . 8) (18 . 9)) 8.467 {1/5:6} B:0 SIMILARITY (1/min{score1}): 0.6664 [and 1/min{score2}: 0.6664] [2803, 2396]: Comparing 1jb7_A and 1i50_H, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 12 (3 H + 9 S) secondary structure elements in 1i50_H, of which 9 satisfy the size requirements. 1.80008 [ 1.80008] ((16 . 1) (17 . 2) (18 . 3) (19 . 5) (20 . 12)) 3.291 {0/9:10} B:0 1.86294 [ 1.86294] ((16 . 1) (17 . 2) (18 . 3) (19 . 5) (23 . 11)) 6.226 {1/9:10} B:0 2.25025 [ 2.25025] ((17 . 1) (18 . 2) (19 . 3) (20 . 5)) 5.230 {0/5:6} B:0 2.25030 [ 2.25030] ((16 . 2) (17 . 3) (18 . 5) (20 . 7)) 5.454 {0/5:6} B:0 2.25049 [ 2.25049] ((16 . 2) (17 . 3) (18 . 5) (21 . 7)) 6.181 {0/5:6} B:0 SIMILARITY (1/min{score1}): 0.6666 [and 1/min{score2}: 0.6666] [2803, 2652]: Comparing 1jb7_A and 1ixr_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 11 (6 H + 5 S) secondary structure elements in 1ixr_A, of which 6 satisfy the size requirements. 1.80007 [ 1.20022] ((16 . 1) (17 . 2) (18 . 3) (19 . 5) (20 . 6)) 3.171 {0/9:10} B:0 2.25002 [ 1.50007] ((16 . 1) (17 . 2) (19 . 5) (20 . 6)) 2.840 {0/6:6} B:0 2.25036 [ 1.50122] ((17 . 1) (18 . 2) (19 . 3) (20 . 5)) 5.738 {0/5:6} B:0 2.25044 [ 1.50148] ((16 . 2) (17 . 3) (18 . 5) (19 . 6)) 6.016 {0/5:6} B:0 5.05053 [ 5.01014] ((16 . 1) (17 . 3) (19 . 5) (20 . 6)) 6.293 {3/6:6} B:0 SIMILARITY (1/min{score1}): 0.5555 [and 1/min{score2}: 0.8332] [2803, 2664]: Comparing 1jb7_A and 1iyj_B, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 44 (19 H + 25 S) secondary structure elements in 1iyj_B, of which 9 satisfy the size requirements. 1.29714 [ 1.29714] ((15 . 13) (16 . 14) (17 . 15) (18 . 16) (19 . 18) (20 . 21) (21 . 22)) 3.802 {1/18:21} B:0 1.86278 [ 1.86278] ((17 . 14) (18 . 15) (19 . 16) (20 . 18) (21 . 19)) 5.934 {1/9:10} B:0 2.25048 [ 2.25048] ((15 . 13) (16 . 14) (19 . 19) (21 . 21)) 6.147 {0/3:6} B:0 2.25081 [ 2.25081] ((16 . 15) (17 . 16) (18 . 18) (19 . 21)) 7.007 {0/6:6} B:0 2.54141 [ 2.54141] ((15 . 17) (16 . 19) (17 . 21) (18 . 22)) 8.678 {1/5:6} B:0 SIMILARITY (1/min{score1}): 0.7709 [and 1/min{score2}: 0.7709] [2803, 2665]: Comparing 1jb7_A and 1iyj_B, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 44 (19 H + 25 S) secondary structure elements in 1iyj_B, of which 6 satisfy the size requirements. 1.80020 [ 1.20069] ((17 . 29) (18 . 30) (19 . 31) (21 . 32) (22 . 33)) 4.200 {0/8:10} B:0 6.02950 [ 6.00590] ((16 . 29) (19 . 31) (21 . 32) (22 . 33)) 7.356 {3/5:6} B:0 SIMILARITY (1/min{score1}): 0.5555 [and 1/min{score2}: 0.8329] [2803, 2667]: Comparing 1jb7_A and 1iyj_B, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 44 (19 H + 25 S) secondary structure elements in 1iyj_B, of which 10 satisfy the size requirements. 1.05368 [ 1.15128] ((15 . 34) (16 . 36) (17 . 38) (18 . 39) (19 . 40) (20 . 41) (21 . 42) (22 . 43) (23 . 44)) 4.529 {2/29:36} B:0 2.25032 [ 2.50023] ((15 . 34) (16 . 36) (21 . 41) (23 . 43)) 5.550 {0/5:6} B:0 2.25097 [ 2.50071] ((16 . 39) (17 . 40) (18 . 41) (22 . 44)) 7.339 {0/6:6} B:0 2.25257 [ 2.50187] ((18 . 36) (19 . 38) (20 . 39) (23 . 43)) 9.359 {0/5:6} B:0 4.09663 [ 4.14462] ((15 . 34) (16 . 38) (17 . 39) (22 . 43)) 5.885 {2/5:6} B:0 SIMILARITY (1/min{score1}): 0.9491 [and 1/min{score2}: 0.8686] [2803, 2801]: Comparing 1jb7_A and 1jb3_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 10 (4 H + 6 S) secondary structure elements in 1jb3_A, of which 10 satisfy the size requirements. 1.80004 [ 2.00003] ((16 . 2) (17 . 4) (18 . 6) (19 . 7) (20 . 9)) 2.759 {0/10:10} B:0 2.25130 [ 2.50094] ((15 . 1) (16 . 4) (20 . 7) (23 . 10)) 7.888 {0/5:6} B:0 2.54038 [ 2.72428] ((17 . 3) (19 . 6) (21 . 7) (22 . 8)) 5.973 {1/5:6} B:0 3.49503 [ 3.57117] ((15 . 1) (17 . 2) (18 . 4) (23 . 10)) 9.551 {2/6:6} B:0 4.09672 [ 4.14471] ((15 . 1) (16 . 2) (17 . 4) (21 . 9)) 7.300 {2/5:6} B:0 SIMILARITY (1/min{score1}): 0.6583 [and 1/min{score2}: 0.5950] [2803, 2802]: Comparing 1jb7_A and 1jb7_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. 1.80434 [ 1.80434] ((18 . 4) (19 . 7) (20 . 9) (21 . 10) (23 . 13)) 9.036 {0/8:10} B:0 1.80461 [ 1.80461] ((18 . 4) (19 . 8) (20 . 9) (21 . 10) (23 . 13)) 9.170 {0/8:10} B:0 2.25104 [ 2.25104] ((16 . 4) (17 . 8) (18 . 9) (22 . 13)) 7.470 {0/5:6} B:0 3.86856 [ 3.86856] ((16 . 1) (18 . 3) (19 . 7) (20 . 9) (21 . 10) (23 . 13)) 8.566 {5/13:15} B:0 6.02949 [ 6.02949] ((16 . 1) (19 . 4) (20 . 7) (21 . 8)) 7.000 {3/5:6} B:0 SIMILARITY (1/min{score1}): 0.5542 [and 1/min{score2}: 0.5542] [2803, 2803]: Comparing 1jb7_A and 1jb7_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. 1.00000 [ 1.00000] ((15 . 15) (16 . 16) (17 . 17) (18 . 18) (19 . 19) (20 . 20) (21 . 21) (22 . 22) (23 . 23)) 0.000 {0/33:36} B:0 2.25035 [ 2.25035] ((17 . 16) (18 . 17) (19 . 18) (20 . 19)) 5.705 {0/6:6} B:0 2.25035 [ 2.25035] ((16 . 17) (17 . 18) (18 . 19) (19 . 20)) 5.705 {0/6:6} B:0 2.25056 [ 2.25056] ((15 . 15) (16 . 16) (19 . 19) (20 . 21)) 6.383 {0/3:6} B:0 2.25068 [ 2.25068] ((16 . 17) (17 . 18) (18 . 19) (19 . 21)) 6.701 {0/5:6} B:0 SIMILARITY (1/min{score1}): 1.0000 [and 1/min{score2}: 1.0000] [2803, 2804]: Comparing 1jb7_A and 1jb7_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 14 satisfy the size requirements. 2.25249 [ 3.50066] ((16 . 29) (19 . 34) (21 . 36) (23 . 37)) 9.290 {0/3:6} B:0 2.25305 [ 3.50081] ((15 . 27) (16 . 29) (20 . 36) (23 . 37)) 9.777 {0/5:6} B:0 2.25636 [ 3.50169] ((16 . 29) (17 . 31) (18 . 32) (22 . 37)) 11.750 {0/6:6} B:0 2.54092 [ 3.59007] ((15 . 35) (16 . 36) (19 . 38) (20 . 39)) 7.729 {1/5:6} B:0 2.54171 [ 3.59036] ((15 . 37) (16 . 38) (17 . 39) (18 . 40)) 9.137 {1/5:6} B:0 SIMILARITY (1/min{score1}): 0.4440 [and 1/min{score2}: 0.3622] [2803, 2805]: Comparing 1jb7_A and 1jb7_B, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 20 (10 H + 10 S) secondary structure elements in 1jb7_B, of which 13 satisfy the size requirements. 1.28684 [ 1.85752] ((15 . 1) (16 . 4) (17 . 5) (18 . 7) (19 . 10) (20 . 12) (21 . 13)) 5.010 {0/18:21} B:0 1.41471 [ 1.90495] ((16 . 4) (17 . 5) (18 . 7) (19 . 10) (20 . 12) (21 . 13) (23 . 16)) 7.382 {2/19:21} B:0 2.17614 [ 2.37074] ((16 . 4) (17 . 5) (18 . 7) (19 . 10) (20 . 11) (21 . 13) (23 . 16)) 7.548 {4/19:21} B:0 2.25027 [ 3.25009] ((17 . 4) (18 . 5) (19 . 7) (20 . 10)) 5.347 {0/6:6} B:0 2.25042 [ 3.25014] ((18 . 4) (19 . 5) (21 . 6) (22 . 8)) 5.961 {0/5:6} B:0 SIMILARITY (1/min{score1}): 0.7771 [and 1/min{score2}: 0.5384] [2803, 2835]: Comparing 1jb7_A and 1je5_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 13 (2 H + 11 S) secondary structure elements in 1je5_A, of which 10 satisfy the size requirements. 3.49464 [ 3.57081] ((15 . 5) (16 . 7) (19 . 11) (21 . 12)) 7.934 {1/3:6} B:0 3.49521 [ 3.57134] ((15 . 5) (16 . 6) (20 . 11) (21 . 12)) 10.070 {1/3:6} B:0 4.09758 [ 4.14554] ((16 . 7) (17 . 8) (18 . 9) (21 . 12)) 11.636 {2/5:6} B:0 1.55059 [ 1.70417] ((15 . 5) (16 . 2) (17 . 4) (18 . 7) (19 . 11) (21 . 12)) 6.935 {1/11:15} B:1 3.35202 [ 3.36149] ((15 . 5) (16 . 2) (17 . 4) (18 . 6) (19 . 11) (20 . 7) (21 . 12)) 7.904 {5/15:21} B:2 SIMILARITY (1/min{score1}): 0.6449 [and 1/min{score2}: 0.5868] [2803, 2927]: Comparing 1jb7_A and 1jjc_B, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 66 (25 H + 41 S) secondary structure elements in 1jjc_B, of which 7 satisfy the size requirements. 1.86217 [ 1.52218] ((16 . 5) (17 . 6) (18 . 7) (19 . 8) (20 . 10)) 3.718 {1/9:10} B:0 2.25000 [ 1.75001] ((16 . 5) (17 . 6) (18 . 7) (19 . 8)) 1.771 {0/6:6} B:0 2.25027 [ 1.75057] ((17 . 5) (18 . 6) (19 . 7) (20 . 8)) 5.312 {0/6:6} B:0 3.49453 [ 3.39518] ((16 . 6) (17 . 7) (18 . 8) (19 . 9)) 7.209 {2/6:6} B:0 2.54021 [ 2.24467] ((16 . 6) (17 . 5) (18 . 8) (19 . 10)) 4.781 {1/5:6} B:1 SIMILARITY (1/min{score1}): 0.5370 [and 1/min{score2}: 0.6570] [2803, 2935]: Comparing 1jb7_A and 1jjg_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 6 (1 H + 5 S) secondary structure elements in 1jjg_A, of which 6 satisfy the size requirements. 1.80003 [ 1.20011] ((16 . 1) (17 . 2) (18 . 3) (19 . 5) (20 . 6)) 2.679 {0/10:10} B:0 1.80073 [ 1.20244] ((16 . 1) (17 . 2) (18 . 3) (19 . 5) (21 . 6)) 5.771 {0/9:10} B:0 2.25029 [ 1.50098] ((17 . 1) (18 . 2) (19 . 3) (20 . 5)) 5.433 {0/6:6} B:0 2.25031 [ 1.50104] ((16 . 1) (17 . 2) (18 . 3) (21 . 6)) 5.513 {0/6:6} B:0 2.25039 [ 1.50130] ((16 . 2) (17 . 3) (18 . 5) (19 . 6)) 5.825 {0/6:6} B:0 SIMILARITY (1/min{score1}): 0.5555 [and 1/min{score2}: 0.8333] [2803, 3054]: Comparing 1jb7_A and 1jt8_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 7 (2 H + 5 S) secondary structure elements in 1jt8_A, of which 7 satisfy the size requirements. 1.80017 [ 1.40037] ((16 . 1) (17 . 2) (18 . 3) (19 . 5) (20 . 6)) 4.029 {0/9:10} B:0 1.80040 [ 1.40085] ((16 . 1) (17 . 2) (18 . 3) (19 . 5) (22 . 7)) 4.969 {0/8:10} B:0 2.25028 [ 1.75058] ((16 . 2) (17 . 3) (18 . 5) (19 . 6)) 5.354 {0/5:6} B:0 2.25040 [ 1.75084] ((17 . 1) (18 . 2) (19 . 3) (20 . 5)) 5.871 {0/5:6} B:0 2.25101 [ 1.75215] ((18 . 1) (19 . 2) (20 . 3) (22 . 4)) 7.416 {0/5:6} B:0 SIMILARITY (1/min{score1}): 0.5555 [and 1/min{score2}: 0.7141] [2803, 3118]: Comparing 1jb7_A and 1k0r_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 25 (12 H + 13 S) secondary structure elements in 1k0r_A, of which 6 satisfy the size requirements. 1.80005 [ 1.20016] ((16 . 6) (17 . 8) (18 . 9) (19 . 11) (20 . 12)) 2.925 {0/10:10} B:0 1.80037 [ 1.20124] ((16 . 6) (17 . 8) (18 . 9) (19 . 11) (21 . 12)) 4.868 {0/9:10} B:0 2.25026 [ 1.50089] ((17 . 6) (18 . 8) (19 . 9) (20 . 11)) 5.294 {0/6:6} B:0 2.25034 [ 1.50114] ((16 . 8) (17 . 9) (18 . 11) (19 . 12)) 5.638 {0/6:6} B:0 2.25069 [ 1.50234] ((17 . 6) (18 . 8) (19 . 9) (21 . 11)) 6.747 {0/5:6} B:0 SIMILARITY (1/min{score1}): 0.5555 [and 1/min{score2}: 0.8332] [2803, 3121]: Comparing 1jb7_A and 1k0s_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 12 (2 H + 10 S) secondary structure elements in 1k0s_A, of which 12 satisfy the size requirements. 1.80074 [ 2.40031] ((16 . 3) (17 . 4) (18 . 5) (19 . 7) (20 . 8)) 5.809 {0/7:10} B:0 2.25011 [ 3.00005] ((17 . 4) (18 . 5) (19 . 7) (21 . 8)) 4.251 {0/4:6} B:0 2.25012 [ 3.00005] ((17 . 4) (18 . 5) (19 . 7) (20 . 8)) 4.380 {0/4:6} B:0 2.25039 [ 3.00017] ((16 . 3) (17 . 4) (18 . 5) (20 . 8)) 5.854 {0/5:6} B:0 2.25102 [ 3.00043] ((15 . 6) (18 . 9) (19 . 10) (20 . 11)) 7.423 {0/5:6} B:0 SIMILARITY (1/min{score1}): 0.5555 [and 1/min{score2}: 0.4166] [2803, 3341]: Comparing 1jb7_A and 1kl9_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 12 (7 H + 5 S) secondary structure elements in 1kl9_A, of which 11 satisfy the size requirements. 1.50068 [ 1.83371] ((16 . 1) (17 . 2) (18 . 3) (19 . 5) (20 . 6) (22 . 7)) 4.954 {0/14:15} B:0 1.86560 [ 2.23700] ((17 . 1) (18 . 2) (19 . 3) (20 . 5) (23 . 8)) 8.811 {1/9:10} B:0 2.25112 [ 2.75061] ((18 . 1) (19 . 2) (20 . 3) (23 . 7)) 7.598 {0/5:6} B:0 2.40368 [ 2.83880] ((16 . 2) (18 . 5) (19 . 6) (23 . 9)) 7.006 {1/6:6} B:0 4.09698 [ 4.20720] ((18 . 1) (19 . 2) (21 . 5) (23 . 7)) 9.351 {2/5:6} B:0 SIMILARITY (1/min{score1}): 0.6664 [and 1/min{score2}: 0.5453] [2803, 3509]: Comparing 1jb7_A and 1l0w_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 48 (24 H + 24 S) secondary structure elements in 1l0w_A, of which 9 satisfy the size requirements. 1.50047 [ 1.50047] ((16 . 3) (17 . 5) (18 . 6) (19 . 8) (20 . 9) (21 . 10)) 4.515 {0/12:15} B:0 1.80003 [ 1.80003] ((17 . 5) (18 . 6) (19 . 8) (20 . 9) (21 . 10)) 2.524 {0/8:10} B:0 2.25028 [ 2.25028] ((16 . 4) (17 . 5) (18 . 6) (19 . 8)) 5.377 {0/4:6} B:0 2.25037 [ 2.25037] ((16 . 5) (17 . 6) (18 . 8) (19 . 9)) 5.753 {0/5:6} B:0 2.25047 [ 2.25047] ((17 . 4) (18 . 5) (19 . 6) (20 . 8)) 6.110 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.6665 [and 1/min{score2}: 0.6665] [2803, 3515]: Comparing 1jb7_A and 1l1o_C, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 15 (5 H + 10 S) secondary structure elements in 1l1o_C, of which 15 satisfy the size requirements. 2.41610 [ 3.78942] ((15 . 1) (17 . 5) (18 . 6) (20 . 9)) 14.799 {1/6:6} B:0 3.49489 [ 4.23382] ((17 . 5) (18 . 6) (19 . 8) (22 . 11)) 9.045 {2/6:6} B:0 4.09681 [ 4.61553] ((16 . 9) (19 . 13) (21 . 14) (22 . 15)) 8.187 {2/5:6} B:0 4.09682 [ 4.61554] ((16 . 9) (19 . 13) (20 . 14) (22 . 15)) 8.300 {2/5:6} B:0 5.02097 [ 5.15477] ((16 . 2) (17 . 3) (19 . 13) (20 . 14) (22 . 15)) 7.757 {4/8:10} B:0 SIMILARITY (1/min{score1}): 0.4139 [and 1/min{score2}: 0.3042] [2803, 3726]: Comparing 1jb7_A and 1ltl_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 22 (9 H + 13 S) secondary structure elements in 1ltl_A, of which 20 satisfy the size requirements. 2.25060 [ 5.00006] ((17 . 17) (18 . 18) (19 . 21) (21 . 22)) 6.520 {0/4:6} B:0 2.25090 [ 5.00008] ((16 . 17) (17 . 18) (18 . 20) (19 . 22)) 7.206 {0/5:6} B:0 2.25210 [ 5.00019] ((17 . 17) (18 . 18) (19 . 20) (21 . 22)) 8.907 {0/4:6} B:0 2.83665 [ 5.07647] ((18 . 17) (19 . 18) (20 . 20) (21 . 21)) 7.798 {1/4:6} B:0 3.49453 [ 5.23055] ((15 . 1) (17 . 3) (20 . 7) (22 . 9)) 7.219 {2/6:6} B:0 SIMILARITY (1/min{score1}): 0.6525 [and 1/min{score2}: 0.2997] [2803, 3742]: Comparing 1jb7_A and 1luz_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 7 (2 H + 5 S) secondary structure elements in 1luz_A, of which 6 satisfy the size requirements. 1.80013 [ 1.20045] ((16 . 1) (17 . 2) (18 . 3) (19 . 6) (21 . 7)) 3.778 {0/9:10} B:0 1.80020 [ 1.20067] ((16 . 1) (17 . 2) (18 . 3) (19 . 6) (20 . 7)) 4.178 {0/9:10} B:0 2.25023 [ 1.50079] ((17 . 1) (18 . 2) (19 . 3) (20 . 6)) 5.143 {0/6:6} B:0 2.25044 [ 1.50147] ((17 . 1) (18 . 2) (19 . 3) (21 . 6)) 6.006 {0/5:6} B:0 2.25048 [ 1.50161] ((16 . 2) (17 . 3) (18 . 6) (19 . 7)) 6.147 {0/5:6} B:0 SIMILARITY (1/min{score1}): 0.5555 [and 1/min{score2}: 0.8330] [2803, 3836]: Comparing 1jb7_A and 1m4v_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 19 (5 H + 14 S) secondary structure elements in 1m4v_A, of which 9 satisfy the size requirements. 1.53474 [ 1.53474] ((16 . 3) (17 . 4) (18 . 5) (19 . 7) (20 . 8) (21 . 9)) 3.836 {1/12:15} B:0 1.80027 [ 1.80027] ((16 . 3) (17 . 4) (18 . 5) (19 . 7) (20 . 9)) 4.528 {0/9:10} B:0 1.95689 [ 1.95689] ((17 . 4) (18 . 5) (19 . 7) (20 . 8) (21 . 9)) 3.314 {1/7:10} B:0 2.25029 [ 2.25029] ((17 . 3) (18 . 4) (19 . 5) (20 . 7)) 5.427 {0/5:6} B:0 2.25041 [ 2.25041] ((16 . 4) (17 . 5) (18 . 7) (19 . 8)) 5.924 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.6516 [and 1/min{score2}: 0.6516] [2803, 4180]: Comparing 1jb7_A and 1n9w_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 28 (13 H + 15 S) secondary structure elements in 1n9w_A, of which 8 satisfy the size requirements. 1.50003 [ 1.33338] ((15 . 1) (17 . 4) (18 . 5) (19 . 6) (20 . 7) (21 . 8)) 2.259 {0/11:15} B:0 1.95705 [ 1.80969] ((15 . 1) (16 . 3) (17 . 4) (18 . 5) (19 . 6)) 4.604 {1/7:10} B:0 2.25035 [ 2.00050] ((16 . 4) (17 . 5) (18 . 6) (19 . 7)) 5.696 {0/5:6} B:0 2.25050 [ 2.00071] ((17 . 3) (18 . 4) (19 . 5) (20 . 6)) 6.223 {0/4:6} B:0 2.25095 [ 2.00136] ((16 . 4) (17 . 5) (18 . 6) (19 . 8)) 7.306 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.6667 [and 1/min{score2}: 0.7500] [2803, 4330]: Comparing 1jb7_A and 1nnx_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 9 (2 H + 7 S) secondary structure elements in 1nnx_A, of which 8 satisfy the size requirements. 1.30423 [ 1.16889] ((15 . 1) (16 . 2) (17 . 4) (18 . 5) (19 . 7) (20 . 8) (21 . 9)) 4.825 {1/16:21} B:0 1.80141 [ 1.60201] ((16 . 3) (17 . 4) (18 . 5) (19 . 7) (21 . 8)) 6.818 {0/8:10} B:0 2.25110 [ 2.00156] ((17 . 2) (18 . 4) (19 . 5) (20 . 7)) 7.567 {0/6:6} B:0 2.40416 [ 2.20825] ((16 . 4) (17 . 5) (18 . 7) (19 . 9)) 8.020 {1/6:6} B:0 5.29873 [ 5.29700] ((15 . 1) (16 . 4) (17 . 3) (18 . 5) (19 . 7) (20 . 8) (21 . 9)) 4.691 {9/17:21} B:1 SIMILARITY (1/min{score1}): 0.7667 [and 1/min{score2}: 0.8555] [2803, 4539]: Comparing 1jb7_A and 1o7i_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 11 (3 H + 8 S) secondary structure elements in 1o7i_A, of which 9 satisfy the size requirements. 1.50027 [ 1.50027] ((16 . 2) (17 . 4) (18 . 5) (19 . 7) (20 . 9) (21 . 10)) 3.945 {0/13:15} B:0 1.80168 [ 1.80168] ((17 . 2) (18 . 4) (19 . 5) (20 . 7) (21 . 8)) 7.122 {0/8:10} B:0 2.25030 [ 2.25030] ((17 . 4) (18 . 5) (19 . 8) (21 . 9)) 5.457 {0/4:6} B:0 2.25069 [ 2.25069] ((16 . 4) (17 . 5) (18 . 7) (19 . 9)) 6.740 {0/5:6} B:0 2.54296 [ 2.54296] ((17 . 4) (18 . 5) (19 . 8) (20 . 10)) 10.540 {1/5:6} B:0 SIMILARITY (1/min{score1}): 0.6665 [and 1/min{score2}: 0.6665] [2803, 4738]: Comparing 1jb7_A and 1oo9_B, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 13 (5 H + 8 S) secondary structure elements in 1oo9_B, of which 9 satisfy the size requirements. 2.25083 [ 2.25083] ((16 . 5) (17 . 6) (18 . 8) (19 . 9)) 7.063 {0/6:6} B:0 2.40359 [ 2.40359] ((17 . 3) (18 . 5) (19 . 6) (23 . 12)) 6.734 {1/6:6} B:0 4.09670 [ 4.09670] ((15 . 2) (16 . 3) (17 . 5) (21 . 9)) 7.047 {2/5:6} B:0 1.43797 [ 1.43797] ((15 . 13) (16 . 3) (17 . 5) (18 . 6) (19 . 8) (20 . 9) (21 . 10)) 5.926 {2/18:21} B:1 4.04046 [ 4.04046] ((16 . 5) (17 . 3) (18 . 9) (19 . 6) (20 . 8)) 5.885 {4/10:10} B:2 SIMILARITY (1/min{score1}): 0.6954 [and 1/min{score2}: 0.6954] [2803, 4821]: Comparing 1jb7_A and 1oxx_K, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 38 (14 H + 24 S) secondary structure elements in 1oxx_K, of which 11 satisfy the size requirements. 2.25004 [ 2.75002] ((16 . 32) (17 . 34) (18 . 35) (19 . 36)) 3.386 {0/5:6} B:0 2.25105 [ 2.75057] ((16 . 26) (17 . 29) (19 . 32) (20 . 34)) 7.478 {0/4:6} B:0 5.05058 [ 5.11075] ((16 . 31) (17 . 32) (19 . 35) (20 . 36)) 7.515 {3/6:6} B:0 6.02949 [ 6.06517] ((18 . 26) (19 . 28) (20 . 29) (21 . 31)) 6.995 {3/5:6} B:0 1.80056 [ 2.20031] ((16 . 38) (17 . 29) (18 . 26) (19 . 32) (21 . 28)) 5.417 {0/8:10} B:3 SIMILARITY (1/min{score1}): 0.5554 [and 1/min{score2}: 0.4545] [2803, 4859]: Comparing 1jb7_A and 1p16_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 32 (11 H + 21 S) secondary structure elements in 1p16_A, of which 10 satisfy the size requirements. 2.25046 [ 2.50033] ((16 . 26) (17 . 27) (18 . 29) (19 . 30)) 6.078 {0/6:6} B:0 5.05060 [ 5.07647] ((17 . 24) (18 . 25) (19 . 26) (22 . 28)) 7.827 {3/6:6} B:0 5.05088 [ 5.07674] ((16 . 24) (17 . 25) (18 . 26) (21 . 29)) 10.733 {3/6:6} B:0 4.47428 [ 4.48956] ((16 . 29) (17 . 27) (19 . 30) (20 . 23) (21 . 26)) 8.675 {4/9:10} B:2 SIMILARITY (1/min{score1}): 0.4444 [and 1/min{score2}: 0.3999] [2803, 4996]: Comparing 1jb7_A and 1pfs_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 7 (0 H + 7 S) secondary structure elements in 1pfs_A, of which 6 satisfy the size requirements. 2.25012 [ 1.50040] ((16 . 1) (17 . 3) (18 . 4) (19 . 5)) 4.344 {0/5:6} B:0 2.25100 [ 1.50336] ((16 . 2) (17 . 3) (18 . 4) (19 . 5)) 7.391 {0/4:6} B:0 2.25104 [ 1.50351] ((16 . 3) (17 . 4) (18 . 5) (19 . 6)) 7.470 {0/5:6} B:0 2.25156 [ 1.50525] ((17 . 2) (18 . 3) (19 . 4) (20 . 5)) 8.265 {0/4:6} B:0 5.83989 [ 5.83478] ((16 . 1) (17 . 2) (18 . 3) (19 . 6) (20 . 4) (21 . 5)) 9.933 {7/12:15} B:1 SIMILARITY (1/min{score1}): 0.4444 [and 1/min{score2}: 0.6665] [2803, 5087]: Comparing 1jb7_A and 1prt_B, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 17 (4 H + 13 S) secondary structure elements in 1prt_B, of which 8 satisfy the size requirements. 1.80035 [ 1.60050] ((16 . 11) (17 . 12) (18 . 13) (19 . 15) (21 . 17)) 4.808 {0/7:10} B:0 2.25066 [ 2.00094] ((17 . 11) (18 . 12) (19 . 13) (21 . 15)) 6.671 {0/3:6} B:0 6.02948 [ 6.01847] ((16 . 12) (19 . 15) (20 . 16) (21 . 17)) 6.871 {3/5:6} B:0 SIMILARITY (1/min{score1}): 0.5554 [and 1/min{score2}: 0.6248] [2803, 5088]: Comparing 1jb7_A and 1prt_D, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 9 (2 H + 7 S) secondary structure elements in 1prt_D, of which 8 satisfy the size requirements. 2.25047 [ 2.00066] ((17 . 2) (18 . 3) (19 . 5) (21 . 7)) 6.111 {0/4:6} B:0 5.05071 [ 5.03192] ((15 . 6) (16 . 7) (17 . 8) (18 . 9)) 9.276 {3/6:6} B:0 6.02954 [ 6.01853] ((15 . 6) (16 . 5) (18 . 8) (19 . 9)) 8.530 {3/5:6} B:1 SIMILARITY (1/min{score1}): 0.4444 [and 1/min{score2}: 0.4998] [2803, 5089]: Comparing 1jb7_A and 1prt_F, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 7 (1 H + 6 S) secondary structure elements in 1prt_F, of which 7 satisfy the size requirements. 1.80030 [ 1.40064] ((16 . 2) (17 . 3) (18 . 4) (19 . 6) (21 . 7)) 4.639 {0/7:10} B:0 2.25052 [ 1.75111] ((17 . 2) (18 . 3) (19 . 4) (21 . 6)) 6.284 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.5555 [and 1/min{score2}: 0.7140] [2803, 5144]: Comparing 1jb7_A and 1pxf_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 8 (2 H + 6 S) secondary structure elements in 1pxf_A, of which 8 satisfy the size requirements. 1.95716 [ 1.80981] ((16 . 2) (17 . 3) (18 . 4) (19 . 6) (21 . 7)) 5.047 {1/7:10} B:0 2.25001 [ 2.00001] ((16 . 2) (17 . 3) (18 . 4) (19 . 6)) 2.198 {0/5:6} B:0 2.25023 [ 2.00033] ((17 . 2) (18 . 3) (19 . 4) (20 . 6)) 5.119 {0/5:6} B:0 2.65346 [ 2.59903] ((15 . 1) (16 . 2) (17 . 3) (18 . 4) (19 . 6)) 5.468 {2/8:10} B:0 2.83673 [ 2.72483] ((16 . 3) (17 . 4) (18 . 6) (19 . 7)) 8.027 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.5109 [and 1/min{score2}: 0.5525] [2803, 5148]: Comparing 1jb7_A and 1pyb_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 10 (2 H + 8 S) secondary structure elements in 1pyb_A, of which 8 satisfy the size requirements. 1.56997 [ 1.42929] ((16 . 2) (17 . 3) (18 . 4) (19 . 6) (20 . 8) (21 . 9)) 5.379 {1/10:15} B:0 1.80006 [ 1.60008] ((16 . 2) (17 . 3) (18 . 4) (19 . 6) (21 . 9)) 3.052 {0/6:10} B:0 1.80033 [ 1.60047] ((16 . 2) (17 . 3) (18 . 4) (19 . 6) (21 . 8)) 4.742 {0/7:10} B:0 1.80105 [ 1.60150] ((16 . 2) (17 . 3) (18 . 4) (19 . 6) (20 . 9)) 6.337 {0/7:10} B:0 2.25000 [ 2.00000] ((16 . 2) (17 . 3) (18 . 4) (19 . 6)) 1.737 {0/5:6} B:0 SIMILARITY (1/min{score1}): 0.6370 [and 1/min{score2}: 0.6996] [2803, 5171]: Comparing 1jb7_A and 1q12_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 33 (12 H + 21 S) secondary structure elements in 1q12_A, of which 9 satisfy the size requirements. 1.89216 [ 1.89216] ((16 . 23) (17 . 24) (18 . 25) (19 . 26) (20 . 28) (21 . 33)) 7.151 {2/12:15} B:0 1.89841 [ 1.89841] ((16 . 23) (17 . 24) (18 . 25) (19 . 26) (20 . 28)) 7.551 {1/8:10} B:0 2.25029 [ 2.25029] ((17 . 28) (18 . 29) (19 . 30) (20 . 31)) 5.442 {0/5:6} B:0 2.25039 [ 2.25039] ((17 . 23) (18 . 24) (19 . 25) (20 . 26)) 5.841 {0/5:6} B:0 6.02946 [ 6.02946] ((16 . 29) (18 . 28) (19 . 30) (20 . 31)) 5.520 {3/5:6} B:1 SIMILARITY (1/min{score1}): 0.5285 [and 1/min{score2}: 0.5285] [2803, 5276]: Comparing 1jb7_A and 1qb5_D, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 8 (2 H + 6 S) secondary structure elements in 1qb5_D, of which 8 satisfy the size requirements. 1.80064 [ 1.60091] ((16 . 2) (17 . 4) (18 . 5) (19 . 7) (21 . 8)) 5.596 {0/8:10} B:0 2.25018 [ 2.00025] ((16 . 3) (17 . 4) (18 . 5) (21 . 8)) 4.805 {0/5:6} B:0 2.54065 [ 2.37909] ((15 . 1) (17 . 4) (18 . 5) (21 . 8)) 6.997 {1/5:6} B:0 2.54078 [ 2.37926] ((15 . 1) (16 . 2) (18 . 5) (21 . 8)) 7.398 {1/5:6} B:0 2.54167 [ 2.38035] ((15 . 1) (17 . 2) (19 . 5) (22 . 6)) 9.088 {1/5:6} B:0 SIMILARITY (1/min{score1}): 0.5554 [and 1/min{score2}: 0.6246] [2803, 5460]: Comparing 1jb7_A and 1quq_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 13 (2 H + 11 S) secondary structure elements in 1quq_A, of which 11 satisfy the size requirements. 1.30409 [ 1.58161] ((15 . 2) (16 . 6) (17 . 8) (18 . 9) (19 . 10) (20 . 11) (21 . 12)) 4.630 {1/16:21} B:0 1.50057 [ 1.83364] ((16 . 6) (17 . 8) (18 . 9) (19 . 10) (20 . 11) (21 . 12)) 4.735 {0/12:15} B:0 1.50840 [ 1.70959] ((15 . 2) (16 . 7) (17 . 8) (18 . 9) (19 . 10) (20 . 11) (21 . 12)) 3.675 {2/16:21} B:0 1.54824 [ 1.86045] ((15 . 2) (17 . 8) (18 . 9) (19 . 10) (20 . 11) (21 . 12)) 2.100 {1/11:15} B:0 2.25048 [ 2.75026] ((16 . 8) (17 . 9) (18 . 10) (19 . 11)) 6.159 {0/5:6} B:0 SIMILARITY (1/min{score1}): 0.7668 [and 1/min{score2}: 0.6323] [2803, 5461]: Comparing 1jb7_A and 1quq_B, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 9 (3 H + 6 S) secondary structure elements in 1quq_B, of which 8 satisfy the size requirements. 1.50009 [ 1.33346] ((15 . 2) (16 . 3) (17 . 4) (18 . 5) (19 . 6) (21 . 7)) 2.986 {0/11:15} B:0 1.80005 [ 1.60007] ((15 . 2) (16 . 3) (17 . 4) (18 . 5) (19 . 6)) 2.914 {0/8:10} B:0 2.25044 [ 2.00063] ((16 . 4) (17 . 5) (18 . 6) (19 . 7)) 6.034 {0/4:6} B:0 2.25088 [ 2.00125] ((17 . 3) (19 . 5) (20 . 6) (23 . 8)) 7.154 {0/5:6} B:0 2.25173 [ 2.00246] ((16 . 4) (17 . 5) (19 . 7) (22 . 8)) 8.479 {0/5:6} B:0 SIMILARITY (1/min{score1}): 0.6666 [and 1/min{score2}: 0.7499] [2803, 5468]: Comparing 1jb7_A and 1qvc_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 8 (1 H + 7 S) secondary structure elements in 1qvc_A, of which 8 satisfy the size requirements. 2.25276 [ 2.00393] ((15 . 5) (16 . 6) (17 . 7) (18 . 8)) 9.532 {0/5:6} B:0 5.05065 [ 5.03186] ((16 . 3) (18 . 4) (19 . 6) (21 . 7)) 8.606 {2/4:6} B:0 1.50416 [ 1.33924] ((16 . 1) (17 . 3) (18 . 4) (19 . 6) (20 . 2) (21 . 7)) 7.795 {0/11:15} B:1 1.50516 [ 1.34065] ((16 . 1) (17 . 3) (18 . 2) (19 . 6) (20 . 4) (21 . 7)) 8.230 {0/11:15} B:2 8.57564 [ 8.57408] ((16 . 6) (17 . 3) (18 . 4) (19 . 7) (20 . 2)) 9.353 {6/7:10} B:2 SIMILARITY (1/min{score1}): 0.6648 [and 1/min{score2}: 0.7467] [2803, 5505]: Comparing 1jb7_A and 1qzg_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 14 (3 H + 11 S) secondary structure elements in 1qzg_A, of which 13 satisfy the size requirements. 1.13832 [ 1.62948] ((15 . 4) (16 . 5) (17 . 8) (18 . 9) (19 . 10) (20 . 12) (21 . 13) (22 . 14)) 5.572 {1/20:28} B:0 1.30361 [ 1.86318] ((15 . 4) (17 . 8) (18 . 9) (19 . 10) (20 . 12) (21 . 13) (22 . 14)) 3.670 {1/16:21} B:0 2.25032 [ 3.25011] ((18 . 8) (19 . 9) (20 . 10) (21 . 11)) 5.576 {0/4:6} B:0 2.25114 [ 3.25038] ((16 . 9) (17 . 11) (18 . 12) (22 . 14)) 7.635 {0/5:6} B:0 2.54121 [ 3.36122] ((16 . 2) (18 . 5) (19 . 8) (21 . 9)) 8.338 {1/5:6} B:0 SIMILARITY (1/min{score1}): 0.8785 [and 1/min{score2}: 0.6137] [2803, 5765]: Comparing 1jb7_A and 1s40_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 15 (6 H + 9 S) secondary structure elements in 1s40_A, of which 9 satisfy the size requirements. 1.80397 [ 1.80397] ((16 . 2) (18 . 3) (19 . 4) (21 . 5) (22 . 6)) 8.835 {0/8:10} B:0 2.25041 [ 2.25041] ((18 . 3) (19 . 4) (21 . 5) (22 . 6)) 5.909 {0/4:6} B:0 5.05057 [ 5.05057] ((16 . 4) (17 . 5) (20 . 8) (23 . 14)) 7.241 {3/6:6} B:0 SIMILARITY (1/min{score1}): 0.5543 [and 1/min{score2}: 0.5543] [2803, 5844]: Comparing 1jb7_A and 1sr3_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 7 (1 H + 6 S) secondary structure elements in 1sr3_A, of which 6 satisfy the size requirements. 1.80017 [ 1.20059] ((16 . 1) (17 . 3) (18 . 4) (19 . 5) (20 . 6)) 4.039 {0/8:10} B:0 2.25047 [ 1.50158] ((16 . 3) (17 . 4) (18 . 5) (19 . 6)) 6.121 {0/4:6} B:0 2.25110 [ 1.50371] ((17 . 1) (19 . 4) (20 . 5) (23 . 7)) 7.576 {0/5:6} B:0 2.25117 [ 1.50395] ((17 . 1) (18 . 3) (19 . 4) (20 . 5)) 7.697 {0/5:6} B:0 4.09694 [ 4.02003] ((16 . 1) (19 . 5) (20 . 6) (22 . 7)) 9.082 {2/5:6} B:0 SIMILARITY (1/min{score1}): 0.5555 [and 1/min{score2}: 0.8329] [2803, 5854]: Comparing 1jb7_A and 1sty, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 13 (5 H + 8 S) secondary structure elements in 1sty, of which 9 satisfy the size requirements. 2.25270 [ 2.25270] ((18 . 6) (19 . 7) (22 . 11) (23 . 12)) 9.478 {0/5:6} B:0 2.54164 [ 2.54164] ((15 . 5) (18 . 6) (19 . 7) (22 . 12)) 9.038 {1/5:6} B:0 4.47430 [ 4.47430] ((18 . 3) (19 . 6) (20 . 7) (22 . 11) (23 . 12)) 8.861 {4/9:10} B:0 5.05057 [ 5.05057] ((15 . 5) (17 . 6) (18 . 7) (22 . 12)) 7.360 {3/6:6} B:0 6.68824 [ 6.68824] ((15 . 5) (16 . 6) (20 . 7) (22 . 12)) 8.115 {4/6:6} B:0 SIMILARITY (1/min{score1}): 0.4439 [and 1/min{score2}: 0.4439] [2803, 5951]: Comparing 1jb7_A and 1uap_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 9 (2 H + 7 S) secondary structure elements in 1uap_A, of which 9 satisfy the size requirements. 1.50005 [ 1.50005] ((16 . 2) (17 . 3) (18 . 5) (19 . 6) (20 . 7) (21 . 8)) 2.597 {0/13:15} B:0 1.80002 [ 1.80002] ((16 . 2) (18 . 5) (19 . 6) (20 . 7) (21 . 8)) 2.476 {0/9:10} B:0 1.80110 [ 1.80110] ((15 . 1) (18 . 5) (19 . 6) (20 . 7) (21 . 8)) 6.405 {0/7:10} B:0 2.25206 [ 2.25206] ((15 . 1) (18 . 5) (19 . 6) (21 . 7)) 8.861 {0/3:6} B:0 2.25254 [ 2.25254] ((16 . 4) (17 . 5) (18 . 6) (19 . 7)) 9.333 {0/5:6} B:0 SIMILARITY (1/min{score1}): 0.6805 [and 1/min{score2}: 0.6805] [2803, 5982]: Comparing 1jb7_A and 1ue1_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 10 (1 H + 9 S) secondary structure elements in 1ue1_A, of which 10 satisfy the size requirements. 2.83855 [ 2.97520] ((15 . 5) (17 . 8) (18 . 9) (19 . 10)) 11.082 {1/4:6} B:0 5.05068 [ 5.07655] ((16 . 4) (18 . 6) (19 . 8) (21 . 9)) 9.012 {2/4:6} B:0 3.77404 [ 3.78633] ((15 . 5) (16 . 4) (17 . 6) (18 . 3) (19 . 9) (21 . 1)) 7.863 {3/8:15} B:3 SIMILARITY (1/min{score1}): 0.3523 [and 1/min{score2}: 0.3361] [2803, 6560]: Comparing 1jb7_A and 3chb_D, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 8 (2 H + 6 S) secondary structure elements in 3chb_D, of which 8 satisfy the size requirements. 2.83639 [ 2.72445] ((15 . 1) (17 . 4) (18 . 5) (21 . 8)) 6.799 {1/4:6} B:0 4.09735 [ 4.06190] ((15 . 1) (17 . 3) (18 . 5) (21 . 7)) 10.917 {2/5:6} B:0 5.05062 [ 5.03184] ((16 . 4) (17 . 3) (18 . 5) (19 . 8)) 8.242 {2/4:6} B:1 SIMILARITY (1/min{score1}): 0.3526 [and 1/min{score2}: 0.3670] [2803, 6596]: Comparing 1jb7_A and 3seb, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 19 (5 H + 14 S) secondary structure elements in 3seb, of which 8 satisfy the size requirements. 1.50054 [ 1.33411] ((16 . 3) (17 . 4) (18 . 5) (19 . 7) (20 . 8) (21 . 9)) 4.685 {0/11:15} B:0 3.49486 [ 3.43705] ((15 . 6) (16 . 7) (17 . 8) (18 . 9)) 8.924 {2/6:6} B:0 5.05066 [ 5.03188] ((19 . 3) (20 . 4) (21 . 5) (22 . 6)) 8.778 {2/4:6} B:0 5.05058 [ 5.03179] ((16 . 7) (19 . 4) (20 . 3) (21 . 5)) 7.465 {2/4:6} B:2 SIMILARITY (1/min{score1}): 0.6664 [and 1/min{score2}: 0.7496] [2803, 6601]: Comparing 1jb7_A and 3tss, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 21 (4 H + 17 S) secondary structure elements in 3tss, of which 8 satisfy the size requirements. 1.80060 [ 1.60085] ((16 . 2) (17 . 4) (18 . 5) (19 . 6) (20 . 8)) 5.502 {0/7:10} B:0 1.80305 [ 1.60434] ((16 . 2) (17 . 4) (18 . 5) (19 . 6) (21 . 8)) 8.272 {0/6:10} B:0 2.25025 [ 2.00035] ((17 . 3) (18 . 4) (19 . 5) (20 . 6)) 5.213 {0/4:6} B:0 2.25223 [ 2.00318] ((16 . 2) (18 . 5) (19 . 6) (21 . 8)) 9.041 {0/3:6} B:0 2.96419 [ 2.92558] ((15 . 1) (17 . 4) (18 . 5) (19 . 6) (20 . 8)) 8.059 {2/7:10} B:0 SIMILARITY (1/min{score1}): 0.5554 [and 1/min{score2}: 0.6247] [2803, 6603]: Comparing 1jb7_A and 3ull_A, based on their crossing files. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 9 satisfy the size requirements. There are 10 (1 H + 9 S) secondary structure elements in 3ull_A, of which 8 satisfy the size requirements. 1.50111 [ 1.33491] ((16 . 1) (17 . 3) (18 . 4) (19 . 6) (20 . 9) (21 . 10)) 5.594 {0/12:15} B:0 1.80031 [ 1.60044] ((17 . 3) (18 . 4) (19 . 6) (20 . 9) (21 . 10)) 4.658 {0/8:10} B:0 2.25432 [ 2.00615] ((16 . 2) (17 . 3) (18 . 4) (21 . 9)) 10.667 {0/5:6} B:0 2.54081 [ 2.37930] ((15 . 5) (16 . 6) (17 . 9) (18 . 10)) 7.474 {1/5:6} B:0 4.09689 [ 4.06143] ((18 . 6) (19 . 1) (20 . 3) (21 . 9)) 8.812 {2/5:6} B:1 SIMILARITY (1/min{score1}): 0.6662 [and 1/min{score2}: 0.7491] -------------------------------------------------------------------------------------------------------------------------