------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 4842 1oz2_A) ( 251 1azp_A) 0.6659 0.6659 6.2711 ( 0 4 6) 0 0.6659 0.6659 6 6 ( 4842 1oz2_A) ( 340 1bb9 ) 0.6666 0.6666 2.7418 ( 0 6 6) 0 0.6666 0.6666 6 6 ( 4842 1oz2_A) ( 414 1bkb ) 0.6666 0.5714 3.2736 ( 0 5 6) 0 0.6666 0.5714 6 7 ( 4842 1oz2_A) ( 501 1c0m_A) 0.6666 0.6666 3.8254 ( 0 5 6) 0 0.6666 0.6666 6 6 ( 4842 1oz2_A) ( 1648 1fx7_A) 0.3948 0.3906 7.0187 ( 2 8 10) 0 0.3948 0.3906 6 7 ( 4842 1oz2_A) ( 1715 1g3s_A) 0.6661 0.5712 5.8131 ( 0 6 6) 0 0.6661 0.5712 6 7 ( 4842 1oz2_A) ( 2073 1h3z_A) 0.6661 0.4999 5.8254 ( 0 4 6) 0 0.8324 0.6248 6 8 ( 4842 1oz2_A) ( 2334 1hyo_A) 0.4666 0.3418 6.9474 ( 1 5 6) 0 0.4668 0.3419 6 11 ( 4842 1oz2_A) ( 2363 1i1j_A) 0.6666 0.5000 2.4333 ( 0 6 6) 0 0.6666 0.5000 6 8 ( 4842 1oz2_A) ( 2581 1ire_B) 0.1996 0.1895 5.9989 ( 2 4 6) 0 0.6319 0.3513 6 14 ( 4842 1oz2_A) ( 2900 1jj2_A) 0.6666 0.5000 3.3956 ( 0 6 6) 0 0.6666 0.5000 6 8 ( 4842 1oz2_A) ( 2913 1jj2_P) 0.6665 0.6665 4.4432 ( 0 5 6) 0 0.6665 0.6665 6 6 ( 4842 1oz2_A) ( 2916 1jj2_S) 0.6663 0.3636 5.1866 ( 0 6 6) 0 0.6663 0.3636 6 11 ( 4842 1oz2_A) ( 3300 1khc_A) 0.8324 0.5554 4.9897 ( 0 8 10) 0 0.8324 0.5554 6 9 ( 4842 1oz2_A) ( 3303 1khi_A) 0.6666 0.6666 2.9206 ( 0 5 6) 0 0.6666 0.6666 6 6 ( 4842 1oz2_A) ( 3326 1kjw_A) 0.6666 0.5714 2.4969 ( 0 6 6) 0 0.6666 0.5714 6 7 ( 4842 1oz2_A) ( 3693 1lpl_A) nil ( 4842 1oz2_A) ( 3783 1m1f_A) 0.6664 0.4444 4.9363 ( 0 5 6) 0 0.6664 0.4444 6 9 ( 4842 1oz2_A) ( 3838 1m4z_A) 0.5275 0.2339 9.7401 ( 1 6 6) 0 0.5275 0.2339 6 17 ( 4842 1oz2_A) ( 3892 1m9s_A) nil ( 4842 1oz2_A) ( 4112 1n27_A) 0.8330 0.7142 3.7073 ( 0 8 10) 0 0.8330 0.7142 6 7 ( 4842 1oz2_A) ( 4209 1ne8_A) 0.6666 0.4000 3.0137 ( 0 6 6) 0 0.8276 0.4995 6 10 ( 4842 1oz2_A) ( 4236 1ng2_A) 0.6666 0.5714 2.9316 ( 0 6 6) 0 0.6666 0.5714 6 7 ( 4842 1oz2_A) ( 4665 1oi1_A) 0.8333 0.8333 1.0311 ( 0 9 10) 0 0.8333 0.8333 6 6 ( 4842 1oz2_A) ( 4842 1oz2_A) 1.0000 1.0000 0.0000 ( 0 14 15) 0 1.0000 1.0000 6 6 ( 4842 1oz2_A) ( 4843 1oz2_A) 0.9414 0.9414 5.3746 ( 1 14 15) 0 0.9414 0.9414 6 6 ( 4842 1oz2_A) ( 5014 1pht ) nil ( 4842 1oz2_A) ( 5548 1r4k_A) 0.6665 0.3636 4.3202 ( 0 5 6) 0 0.6665 0.3636 6 11 ( 4842 1oz2_A) ( 5668 1rl2_A) 0.6666 0.5714 3.3331 ( 0 6 6) 0 0.6666 0.5714 6 7 ( 4842 1oz2_A) ( 5805 1sf9_A) 0.7526 0.6024 7.2743 ( 1 10 10) 0 0.7526 0.6024 6 8 ( 4842 1oz2_A) ( 5957 1ub4_A) 0.6666 0.4000 3.2076 ( 0 6 6) 0 0.6666 0.4000 6 10 ( 4842 1oz2_A) ( 6009 1ug1_A) 0.6664 0.6664 4.9732 ( 0 6 6) 0 0.6664 0.6664 6 6 ( 4842 1oz2_A) ( 6325 1vyn_A) 0.6666 0.3333 3.1825 ( 0 6 6) 0 0.6666 0.3333 6 12 ( 4842 1oz2_A) ( 6391 2ahj_B) 0.6331 0.3069 16.6143 ( 0 6 6) 0 0.6331 0.3069 6 13 ( 4842 1oz2_A) ( 6604 3vub ) 0.5285 0.4529 7.2781 ( 1 6 6) 0 0.6648 0.4996 6 8 -------------------------------------------------------------------------------------------------------------------------