------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 251 1azp_A) ( 251 1azp_A) 1.0000 1.0000 0.0000 ( 0 12 15) 0 1.0000 1.0000 6 6 ( 251 1azp_A) ( 340 1bb9 ) 0.6664 0.6664 4.5846 ( 0 4 6) 0 0.6664 0.6664 6 6 ( 251 1azp_A) ( 414 1bkb ) 0.8331 0.7142 3.4897 ( 0 6 10) 0 0.8331 0.7142 6 7 ( 251 1azp_A) ( 501 1c0m_A) 0.5653 0.5653 3.7322 ( 1 6 10) 0 0.5653 0.5653 6 6 ( 251 1azp_A) ( 1648 1fx7_A) 0.6661 0.5712 5.7695 ( 0 4 6) 0 0.6664 0.5713 6 7 ( 251 1azp_A) ( 1715 1g3s_A) 0.6822 0.6291 9.0102 ( 1 8 10) 0 0.6822 0.6291 6 7 ( 251 1azp_A) ( 2073 1h3z_A) 0.2488 0.2462 8.6729 ( 2 5 6) 0 0.2488 0.2462 6 8 ( 251 1azp_A) ( 2334 1hyo_A) 0.6655 0.3636 6.9036 ( 0 4 6) 0 0.6655 0.3636 6 11 ( 251 1azp_A) ( 2363 1i1j_A) 0.6663 0.4999 5.2809 ( 0 4 6) 0 0.6663 0.5160 6 8 ( 251 1azp_A) ( 2581 1ire_B) 0.4657 0.2785 10.6890 ( 1 5 6) 0 0.4657 0.2785 6 14 ( 251 1azp_A) ( 2900 1jj2_A) 0.6661 0.4999 5.6938 ( 0 4 6) 0 0.8314 0.6245 6 8 ( 251 1azp_A) ( 2913 1jj2_P) 0.6665 0.6665 4.0776 ( 0 4 6) 0 0.6665 0.6665 6 6 ( 251 1azp_A) ( 2916 1jj2_S) 0.6656 0.3636 6.7623 ( 0 4 6) 0 0.8309 0.4544 6 11 ( 251 1azp_A) ( 3300 1khc_A) 0.6666 0.4444 3.2324 ( 0 4 6) 0 0.6666 0.4444 6 9 ( 251 1azp_A) ( 3303 1khi_A) 0.6662 0.6662 5.6273 ( 0 4 6) 0 0.6662 0.6662 6 6 ( 251 1azp_A) ( 3326 1kjw_A) 0.1996 0.1993 6.5171 ( 2 4 6) 0 0.1996 0.1993 6 7 ( 251 1azp_A) ( 3693 1lpl_A) 0.6662 0.6662 5.6173 ( 0 4 6) 0 0.6665 0.6665 6 6 ( 251 1azp_A) ( 3783 1m1f_A) 0.6620 0.4438 9.8835 ( 0 5 6) 1 0.6620 0.4438 6 9 ( 251 1azp_A) ( 3838 1m4z_A) 0.6652 0.2353 7.4096 ( 0 2 6) 0 0.6652 0.2353 6 17 ( 251 1azp_A) ( 3892 1m9s_A) 0.6665 0.6665 3.9722 ( 0 4 6) 0 0.6665 0.6665 6 6 ( 251 1azp_A) ( 4112 1n27_A) 0.6666 0.5714 3.7189 ( 0 4 6) 0 0.6666 0.5714 6 7 ( 251 1azp_A) ( 4209 1ne8_A) 0.4665 0.3670 7.8339 ( 1 5 6) 0 0.8330 0.5000 6 10 ( 251 1azp_A) ( 4236 1ng2_A) 0.6660 0.5711 5.9972 ( 0 4 6) 0 0.8331 0.7142 6 7 ( 251 1azp_A) ( 4665 1oi1_A) 0.6661 0.6661 5.7202 ( 0 4 6) 0 0.6661 0.6661 6 6 ( 251 1azp_A) ( 4842 1oz2_A) 0.6659 0.6659 6.2711 ( 0 4 6) 0 0.6659 0.6659 6 6 ( 251 1azp_A) ( 4843 1oz2_A) 0.6661 0.6661 5.7052 ( 0 4 6) 0 0.6661 0.6661 6 6 ( 251 1azp_A) ( 5014 1pht ) 0.1996 0.1993 8.0784 ( 2 4 6) 0 0.8325 0.7139 6 7 ( 251 1azp_A) ( 5548 1r4k_A) 0.6649 0.3636 7.6892 ( 0 4 6) 0 0.8306 0.4544 6 11 ( 251 1azp_A) ( 5668 1rl2_A) 0.6664 0.5713 4.8244 ( 0 4 6) 0 0.8310 0.7132 6 7 ( 251 1azp_A) ( 5805 1sf9_A) 0.1996 0.1987 7.9398 ( 2 4 6) 0 0.1996 0.1987 6 8 ( 251 1azp_A) ( 5957 1ub4_A) nil ( 251 1azp_A) ( 6009 1ug1_A) 0.6665 0.6665 4.3914 ( 0 4 6) 0 0.6666 0.6666 6 6 ( 251 1azp_A) ( 6325 1vyn_A) 0.6666 0.3333 3.4937 ( 0 4 6) 0 0.8330 0.4167 6 12 ( 251 1azp_A) ( 6391 2ahj_B) nil ( 251 1azp_A) ( 6604 3vub ) 0.1996 0.1987 8.8698 ( 2 4 6) 0 0.6664 0.4999 6 8 -------------------------------------------------------------------------------------------------------------------------