------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 2363 1i1j_A) ( 251 1azp_A) 0.4999 0.6663 5.2809 ( 0 4 6) 0 0.5160 0.6665 8 6 ( 2363 1i1j_A) ( 340 1bb9 ) 0.6250 0.8333 2.1765 ( 0 9 10) 0 0.6250 0.8333 8 6 ( 2363 1i1j_A) ( 414 1bkb ) 0.4204 0.4455 5.1099 ( 1 5 6) 0 0.4204 0.4455 8 7 ( 2363 1i1j_A) ( 501 1c0m_A) 0.1987 0.1996 7.8346 ( 3 6 6) 0 0.1987 0.1996 8 6 ( 2363 1i1j_A) ( 1648 1fx7_A) 0.6250 0.7143 1.9376 ( 0 8 10) 0 0.6250 0.7143 8 7 ( 2363 1i1j_A) ( 1715 1g3s_A) 0.6250 0.7143 2.3220 ( 0 8 10) 0 0.6250 0.7143 8 7 ( 2363 1i1j_A) ( 2073 1h3z_A) 0.6249 0.6249 3.8511 ( 0 9 10) 0 0.6249 0.6249 8 8 ( 2363 1i1j_A) ( 2334 1hyo_A) 0.6250 0.4545 2.3954 ( 0 9 10) 0 0.6250 0.4545 8 11 ( 2363 1i1j_A) ( 2363 1i1j_A) 1.0000 1.0000 0.0000 ( 0 26 28) 0 1.0000 1.0000 8 8 ( 2363 1i1j_A) ( 2581 1ire_B) 0.6249 0.3571 4.1938 ( 0 7 10) 0 0.6249 0.3571 8 14 ( 2363 1i1j_A) ( 2900 1jj2_A) 0.5931 0.5931 4.3011 ( 1 9 10) 0 0.5931 0.5931 8 8 ( 2363 1i1j_A) ( 2913 1jj2_P) 0.6250 0.8332 2.9046 ( 0 8 10) 0 0.6250 0.8332 8 6 ( 2363 1i1j_A) ( 2916 1jj2_S) 0.6249 0.4545 4.0465 ( 0 9 10) 0 0.6249 0.4545 8 11 ( 2363 1i1j_A) ( 3300 1khc_A) 0.5000 0.4444 3.3661 ( 0 6 6) 0 0.5921 0.5364 8 9 ( 2363 1i1j_A) ( 3303 1khi_A) nil ( 2363 1i1j_A) ( 3326 1kjw_A) 0.4999 0.5712 5.6155 ( 0 6 6) 0 0.4999 0.5712 8 7 ( 2363 1i1j_A) ( 3693 1lpl_A) 0.6250 0.8333 1.8558 ( 0 8 10) 0 0.6250 0.8333 8 6 ( 2363 1i1j_A) ( 3783 1m1f_A) 0.6248 0.5555 4.6698 ( 0 10 10) 0 0.7346 0.6579 8 9 ( 2363 1i1j_A) ( 3838 1m4z_A) 0.6249 0.2941 4.4498 ( 0 9 10) 0 0.6249 0.3456 8 17 ( 2363 1i1j_A) ( 3892 1m9s_A) 0.6250 0.8332 3.1203 ( 0 8 10) 0 0.6250 0.8332 8 6 ( 2363 1i1j_A) ( 4112 1n27_A) 0.6250 0.7143 2.6373 ( 0 9 10) 0 0.6250 0.7143 8 7 ( 2363 1i1j_A) ( 4209 1ne8_A) 0.5812 0.5234 3.3865 ( 2 13 15) 0 0.6234 0.5234 8 10 ( 2363 1i1j_A) ( 4236 1ng2_A) 0.4203 0.4453 7.2572 ( 1 5 6) 0 0.6247 0.7136 8 7 ( 2363 1i1j_A) ( 4665 1oi1_A) 0.5000 0.6667 1.8428 ( 0 6 6) 0 0.5000 0.6667 8 6 ( 2363 1i1j_A) ( 4842 1oz2_A) 0.5000 0.6666 2.4333 ( 0 6 6) 0 0.5000 0.6666 8 6 ( 2363 1i1j_A) ( 4843 1oz2_A) 0.5000 0.6667 1.9727 ( 0 6 6) 0 0.5000 0.6667 8 6 ( 2363 1i1j_A) ( 5014 1pht ) 0.6250 0.7142 3.1200 ( 0 9 10) 0 0.6250 0.7142 8 7 ( 2363 1i1j_A) ( 5548 1r4k_A) 0.4997 0.3636 6.9602 ( 0 6 6) 0 0.5000 0.3636 8 11 ( 2363 1i1j_A) ( 5668 1rl2_A) 0.6250 0.7143 2.5633 ( 0 9 10) 0 0.6250 0.7143 8 7 ( 2363 1i1j_A) ( 5805 1sf9_A) 0.2909 0.2909 10.1668 ( 2 6 6) 0 0.5774 0.5774 8 8 ( 2363 1i1j_A) ( 5957 1ub4_A) 0.6250 0.5000 3.2173 ( 0 9 10) 0 0.6250 0.5385 8 10 ( 2363 1i1j_A) ( 6009 1ug1_A) 0.6250 0.8333 2.1716 ( 0 9 10) 0 0.6250 0.8333 8 6 ( 2363 1i1j_A) ( 6325 1vyn_A) 0.4999 0.3333 4.9876 ( 0 5 6) 0 0.4999 0.3671 8 12 ( 2363 1i1j_A) ( 6391 2ahj_B) 0.4999 0.3077 5.6997 ( 0 4 6) 0 0.6249 0.3846 8 13 ( 2363 1i1j_A) ( 6604 3vub ) 0.6250 0.6250 2.8043 ( 0 9 10) 0 0.6250 0.6250 8 8 -------------------------------------------------------------------------------------------------------------------------