------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 1648 1fx7_A) ( 251 1azp_A) 0.5712 0.6661 5.7695 ( 0 4 6) 0 0.5713 0.6664 7 6 ( 1648 1fx7_A) ( 340 1bb9 ) 0.7143 0.8333 2.4413 ( 0 9 10) 0 0.7143 0.8333 7 6 ( 1648 1fx7_A) ( 414 1bkb ) 0.3789 0.3789 7.7094 ( 1 4 6) 0 0.3789 0.3789 7 7 ( 1648 1fx7_A) ( 501 1c0m_A) 0.7143 0.8333 2.5969 ( 0 8 10) 0 0.7143 0.8333 7 6 ( 1648 1fx7_A) ( 1648 1fx7_A) 1.0000 1.0000 0.0000 ( 0 20 21) 0 1.0000 1.0000 7 7 ( 1648 1fx7_A) ( 1715 1g3s_A) 0.9999 0.9999 2.1444 ( 0 19 21) 0 0.9999 0.9999 7 7 ( 1648 1fx7_A) ( 2073 1h3z_A) 0.4915 0.4530 6.9760 ( 1 6 6) 0 0.5710 0.4998 7 8 ( 1648 1fx7_A) ( 2334 1hyo_A) 0.5714 0.3636 3.8395 ( 0 5 6) 0 0.6569 0.4474 7 11 ( 1648 1fx7_A) ( 2363 1i1j_A) 0.7143 0.6250 1.9376 ( 0 8 10) 0 0.7143 0.6250 7 8 ( 1648 1fx7_A) ( 2581 1ire_B) 0.8200 0.4273 4.8987 ( 1 13 15) 0 0.8200 0.4273 7 14 ( 1648 1fx7_A) ( 2900 1jj2_A) 0.6569 0.5931 4.2011 ( 1 9 10) 0 0.6569 0.5931 7 8 ( 1648 1fx7_A) ( 2913 1jj2_P) 0.8206 0.9272 3.7399 ( 1 13 15) 0 0.8206 0.9272 7 6 ( 1648 1fx7_A) ( 2916 1jj2_S) 0.7141 0.4545 3.8342 ( 0 9 10) 0 0.7141 0.4545 7 11 ( 1648 1fx7_A) ( 3300 1khc_A) 0.5714 0.4444 3.8739 ( 0 5 6) 0 0.7128 0.5551 7 9 ( 1648 1fx7_A) ( 3303 1khi_A) 0.6315 0.6858 4.4756 ( 1 8 10) 0 0.6315 0.6858 7 6 ( 1648 1fx7_A) ( 3326 1kjw_A) 0.6570 0.6570 3.5361 ( 1 9 10) 0 0.6570 0.6570 7 7 ( 1648 1fx7_A) ( 3693 1lpl_A) 0.7143 0.8333 2.3440 ( 0 8 10) 0 0.7143 0.8333 7 6 ( 1648 1fx7_A) ( 3783 1m1f_A) 0.5701 0.4441 8.7356 ( 0 4 6) 0 0.7142 0.5555 7 9 ( 1648 1fx7_A) ( 3838 1m4z_A) 0.5697 0.2353 9.3577 ( 0 4 6) 0 0.7136 0.2941 7 17 ( 1648 1fx7_A) ( 3892 1m9s_A) 0.7142 0.8331 3.3855 ( 0 8 10) 0 0.7142 0.8331 7 6 ( 1648 1fx7_A) ( 4112 1n27_A) 0.7142 0.7142 2.8430 ( 0 8 10) 0 0.7142 0.7142 7 7 ( 1648 1fx7_A) ( 4209 1ne8_A) 0.4915 0.3823 7.1203 ( 1 6 6) 0 0.7138 0.4999 7 10 ( 1648 1fx7_A) ( 4236 1ng2_A) 0.7143 0.7143 2.3898 ( 0 9 10) 0 0.7143 0.7143 7 7 ( 1648 1fx7_A) ( 4665 1oi1_A) 0.5714 0.6666 2.7974 ( 0 5 6) 0 0.5714 0.6666 7 6 ( 1648 1fx7_A) ( 4842 1oz2_A) 0.3906 0.3948 7.0187 ( 2 8 10) 0 0.3906 0.3948 7 6 ( 1648 1fx7_A) ( 4843 1oz2_A) 0.3906 0.3948 6.9424 ( 2 8 10) 0 0.4454 0.4667 7 6 ( 1648 1fx7_A) ( 5014 1pht ) 0.4454 0.4454 6.6402 ( 1 5 6) 0 0.7138 0.7138 7 7 ( 1648 1fx7_A) ( 5548 1r4k_A) 0.7141 0.4545 3.8448 ( 0 9 10) 0 0.7141 0.5040 7 11 ( 1648 1fx7_A) ( 5668 1rl2_A) 0.7143 0.7143 2.6015 ( 0 9 10) 0 0.7143 0.7143 7 7 ( 1648 1fx7_A) ( 5805 1sf9_A) 0.7143 0.6250 2.5805 ( 0 9 10) 0 0.7143 0.6250 7 8 ( 1648 1fx7_A) ( 5957 1ub4_A) 0.5708 0.3999 7.1236 ( 0 5 6) 0 0.6025 0.5222 7 10 ( 1648 1fx7_A) ( 6009 1ug1_A) 0.7143 0.8333 2.3803 ( 0 9 10) 0 0.7143 0.8333 7 6 ( 1648 1fx7_A) ( 6325 1vyn_A) 0.3789 0.3020 8.5504 ( 1 4 6) 0 0.5942 0.4045 7 12 ( 1648 1fx7_A) ( 6391 2ahj_B) 0.8206 0.4597 3.4995 ( 1 13 15) 0 0.8206 0.4597 7 13 ( 1648 1fx7_A) ( 6604 3vub ) 0.7141 0.6249 3.7234 ( 0 9 10) 0 0.7141 0.6249 7 8 -------------------------------------------------------------------------------------------------------------------------