------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 1760 1g87_A) ( 34 1a3q_A) 0.6348 0.6976 7.8680 ( 0 13 21) 0 0.6348 0.6976 11 10 ( 1760 1g87_A) ( 159 1amx ) 0.4544 0.3571 6.1471 ( 0 4 10) 0 0.7258 0.5710 11 14 ( 1760 1g87_A) ( 169 1aoh_A) 0.6350 0.6350 7.7260 ( 0 9 21) 0 0.6350 0.6350 11 11 ( 1760 1g87_A) ( 245 1ayo_A) 0.7262 0.7262 6.0517 ( 0 13 28) 0 0.7262 0.7262 11 11 ( 1760 1g87_A) ( 374 1bg1_A) 0.5451 0.3333 6.8361 ( 0 7 15) 0 0.7198 0.4438 11 18 ( 1760 1g87_A) ( 1008 1e2w_A) 0.4545 0.4999 5.1883 ( 0 4 10) 0 0.4545 0.4999 11 10 ( 1760 1g87_A) ( 1040 1e5c_A) 0.6358 0.8723 6.1092 ( 0 9 21) 0 0.7264 0.9958 11 8 ( 1760 1g87_A) ( 1087 1eaq_A) 0.4544 0.4544 6.5780 ( 0 6 10) 0 0.4544 0.4544 11 11 ( 1760 1g87_A) ( 1300 1exh ) 0.4543 0.4996 7.7231 ( 0 6 10) 0 0.6357 0.6989 11 10 ( 1760 1g87_A) ( 1351 1f0l_A) 0.7263 0.4998 6.0159 ( 0 18 28) 0 0.7263 0.4998 11 16 ( 1760 1g87_A) ( 1689 1g1k_A) 0.7263 0.6150 5.9778 ( 0 10 28) 0 0.7263 0.6150 11 13 ( 1760 1g87_A) ( 1760 1g87_A) 1.0000 1.0000 0.0000 ( 0 46 55) 0 1.0000 1.0000 11 11 ( 1760 1g87_A) ( 2097 1h6f_A) 0.3635 0.2857 8.4084 ( 0 5 6) 0 0.3635 0.2857 11 14 ( 1760 1g87_A) ( 2375 1i31_A) 0.7242 0.4702 7.9826 ( 0 11 28) 0 0.7242 0.4702 11 17 ( 1760 1g87_A) ( 2769 1j8r_A) 0.3635 0.2857 8.5760 ( 0 3 6) 0 0.6318 0.4986 11 14 ( 1760 1g87_A) ( 3343 1klf_B) 0.3636 0.3077 4.9660 ( 0 6 6) 0 0.6354 0.5381 11 13 ( 1760 1g87_A) ( 3344 1klf_B) 0.6329 0.8583 9.7224 ( 0 9 21) 0 0.6329 0.8583 11 8 ( 1760 1g87_A) ( 3803 1m2o_A) 0.3636 0.3333 6.1675 ( 0 0 6) 0 0.5452 0.4999 11 12 ( 1760 1g87_A) ( 3986 1mnn_A) 0.3636 0.1818 6.4368 ( 0 5 6) 0 0.5444 0.3137 11 22 ( 1760 1g87_A) ( 4098 1n12_A) 0.6310 0.8499 7.8427 ( 1 16 21) 0 0.6310 0.8499 11 8 ( 1760 1g87_A) ( 4141 1n67_A) 0.6354 0.6354 7.0032 ( 0 11 21) 0 0.7243 0.7243 11 11 ( 1760 1g87_A) ( 4142 1n67_A) 0.4544 0.3845 6.9356 ( 0 2 10) 0 0.8175 0.6920 11 13 ( 1760 1g87_A) ( 4187 1nbc_A) 0.8179 0.8179 3.8238 ( 0 27 36) 0 0.8179 0.8179 11 11 ( 1760 1g87_A) ( 4232 1nfi_A) 0.6339 0.8632 8.8864 ( 0 12 21) 0 0.6339 0.8632 11 8 ( 1760 1g87_A) ( 4570 1o9w_A) 0.4544 0.3333 6.9728 ( 0 0 10) 0 0.5453 0.4000 11 15 ( 1760 1g87_A) ( 4910 1p5v_B) 0.5445 0.8482 8.4840 ( 0 9 15) 0 0.5451 0.8535 11 7 ( 1760 1g87_A) ( 4922 1p7h_L) 0.4544 0.4544 6.1305 ( 0 6 10) 0 0.7222 0.7222 11 11 ( 1760 1g87_A) ( 4976 1pd1_A) 0.3635 0.3333 8.3631 ( 0 1 6) 0 0.5451 0.4998 11 12 ( 1760 1g87_A) ( 4985 1pdk_B) 0.4544 0.5553 6.1473 ( 0 4 10) 0 0.4544 0.5553 11 9 ( 1760 1g87_A) ( 5278 1qba ) 0.6363 0.6363 3.5495 ( 0 14 21) 0 0.7263 0.7263 11 11 ( 1760 1g87_A) ( 5520 1r17_A) 0.4545 0.4166 5.1910 ( 0 3 10) 0 0.4545 0.4166 11 12 ( 1760 1g87_A) ( 5521 1r17_A) 0.8137 0.8137 7.5390 ( 0 21 36) 0 0.8137 0.8137 11 11 ( 1760 1g87_A) ( 6068 1uol_A) 0.4545 0.3846 3.8013 ( 0 5 10) 0 0.6360 0.5383 11 13 ( 1760 1g87_A) ( 6119 1uur_A) 0.4544 0.3333 6.4612 ( 0 4 10) 0 0.4544 0.3333 11 15 -------------------------------------------------------------------------------------------------------------------------