------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 765 1d7p_M) ( 387 1bhg_A) 0.3845 0.5546 8.2256 ( 0 5 10) 0 0.6140 0.8802 13 9 ( 765 1d7p_M) ( 607 1ciy ) 0.4590 0.5907 5.3690 ( 1 12 15) 0 0.5359 0.6909 13 10 ( 765 1d7p_M) ( 700 1cx1_A) 0.4615 0.5998 5.1501 ( 0 10 15) 0 0.4615 0.5998 13 10 ( 765 1d7p_M) ( 765 1d7p_M) 1.0000 1.0000 0.0000 ( 0 64 78) 0 1.0000 1.0000 13 13 ( 765 1d7p_M) ( 1271 1eut ) 0.6144 0.8827 3.5189 ( 1 22 28) 0 0.6144 0.8827 13 9 ( 765 1d7p_M) ( 1884 1gny_A) 0.4615 0.4615 5.6199 ( 0 10 15) 0 0.6268 0.6268 13 13 ( 765 1d7p_M) ( 1918 1gqp_A) 0.6910 0.5994 3.4218 ( 1 24 36) 0 0.6910 0.5994 13 15 ( 765 1d7p_M) ( 1954 1gu3_A) 0.4615 0.6662 5.4053 ( 0 7 15) 0 0.4615 0.6662 13 9 ( 765 1d7p_M) ( 1959 1gui_A) 0.4495 0.5193 5.0008 ( 1 8 15) 0 0.6624 0.7552 13 11 ( 765 1d7p_M) ( 1989 1gwm_A) 0.3846 0.4544 6.4235 ( 0 7 10) 0 0.5384 0.6362 13 11 ( 765 1d7p_M) ( 2116 1h6y_A) 0.4615 0.4999 4.9593 ( 0 7 15) 0 0.4615 0.4999 13 12 ( 765 1d7p_M) ( 2241 1hn0_A) 0.4613 0.4996 7.6338 ( 0 10 15) 0 0.6135 0.6638 13 12 ( 765 1d7p_M) ( 2408 1i5p_A) 0.4615 0.4999 5.3409 ( 0 8 15) 0 0.5472 0.5736 13 12 ( 765 1d7p_M) ( 2762 1j83_A) 0.3846 0.4998 6.1587 ( 0 7 10) 0 0.4566 0.4998 13 10 ( 765 1d7p_M) ( 2872 1jhj_A) 0.6743 0.6302 3.3472 ( 2 24 36) 0 0.6743 0.6302 13 14 ( 765 1d7p_M) ( 2886 1ji6_A) 0.4615 0.5998 5.0096 ( 0 10 15) 0 0.4615 0.5998 13 10 ( 765 1d7p_M) ( 3063 1ju3_A) 0.3839 0.3839 12.1354 ( 0 7 10) 0 0.4225 0.4225 13 13 ( 765 1d7p_M) ( 3098 1jz7_A) 0.3846 0.2941 5.2588 ( 0 7 10) 0 0.5381 0.4117 13 17 ( 765 1d7p_M) ( 3124 1k12_A) 0.6917 0.6917 2.9682 ( 1 29 36) 0 0.6917 0.6917 13 13 ( 765 1d7p_M) ( 3157 1k3i_A) 0.6137 0.8783 3.3912 ( 1 19 28) 0 0.6137 0.8783 13 9 ( 765 1d7p_M) ( 3170 1k45_A) 0.4614 0.5452 6.3078 ( 0 9 15) 0 0.6889 0.8104 13 11 ( 765 1d7p_M) ( 3280 1kex_A) 0.6923 0.8999 2.6510 ( 0 28 36) 0 0.6923 0.8999 13 10 ( 765 1d7p_M) ( 3297 1kgy_A) 0.3844 0.4993 8.8923 ( 0 9 10) 0 0.5383 0.6996 13 10 ( 765 1d7p_M) ( 3562 1l7l_A) 0.3846 0.7137 5.4014 ( 0 0 10) 0 0.3846 0.7137 13 7 ( 765 1d7p_M) ( 3680 1lns_A) 0.3846 0.2632 5.0439 ( 0 7 10) 0 0.4944 0.3938 13 19 ( 765 1d7p_M) ( 4423 1nx9_A) 0.3846 0.3125 5.3560 ( 0 9 10) 0 0.6802 0.5581 13 16 ( 765 1d7p_M) ( 4496 1o59_A) 0.5384 0.6362 4.1412 ( 0 15 21) 0 0.5384 0.6362 13 11 ( 765 1d7p_M) ( 4497 1o59_A) 0.5384 0.7774 4.2343 ( 0 17 21) 0 0.5384 0.7774 13 9 ( 765 1d7p_M) ( 4599 1od3_A) 0.3845 0.4997 7.1667 ( 0 6 10) 0 0.5980 0.7427 13 10 ( 765 1d7p_M) ( 4654 1oh4_A) 0.5383 0.4666 5.6079 ( 0 16 21) 0 0.6148 0.5330 13 15 ( 765 1d7p_M) ( 4929 1p8j_A) 0.5379 0.8690 7.4647 ( 0 15 21) 0 0.5379 0.8690 13 8 ( 765 1d7p_M) ( 5569 1r64_A) 0.4563 0.5337 6.5292 ( 1 10 15) 0 0.4888 0.5405 13 11 ( 765 1d7p_M) ( 6050 1umh_A) 0.4615 0.5000 4.3561 ( 0 1 15) 0 0.4739 0.5000 13 12 ( 765 1d7p_M) ( 6140 1uxz_A) 0.4615 0.4615 5.1961 ( 0 11 15) 0 0.4706 0.4706 13 13 ( 765 1d7p_M) ( 6347 1xna_A) 0.5384 0.6363 4.0978 ( 0 10 21) 0 0.5384 0.6363 13 11 -------------------------------------------------------------------------------------------------------------------------