------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 6347 1xna_A) ( 387 1bhg_A) 0.7266 0.8870 5.4964 ( 0 14 28) 0 0.7266 0.8870 11 9 ( 6347 1xna_A) ( 607 1ciy ) 0.7271 0.7997 4.0773 ( 0 16 28) 0 0.7271 0.7997 11 10 ( 6347 1xna_A) ( 700 1cx1_A) 0.7270 0.7996 4.2514 ( 0 14 28) 0 0.7270 0.7996 11 10 ( 6347 1xna_A) ( 765 1d7p_M) 0.6363 0.5384 4.0978 ( 0 10 21) 0 0.6363 0.5384 11 13 ( 6347 1xna_A) ( 1271 1eut ) 0.5452 0.6659 6.3271 ( 0 9 15) 0 0.5453 0.6662 11 9 ( 6347 1xna_A) ( 1884 1gny_A) 0.7269 0.6152 4.6344 ( 0 16 28) 0 0.7269 0.6152 11 13 ( 6347 1xna_A) ( 1918 1gqp_A) 0.7270 0.5333 4.2649 ( 0 11 28) 0 0.7270 0.5333 11 15 ( 6347 1xna_A) ( 1954 1gu3_A) 0.7271 0.8885 3.5590 ( 0 12 28) 0 0.7271 0.8885 11 9 ( 6347 1xna_A) ( 1959 1gui_A) 0.7271 0.7271 4.0617 ( 0 9 28) 0 0.7271 0.7271 11 11 ( 6347 1xna_A) ( 1989 1gwm_A) 0.7272 0.7272 3.4255 ( 0 14 28) 0 0.7272 0.7272 11 11 ( 6347 1xna_A) ( 2116 1h6y_A) 0.7271 0.6665 3.9237 ( 0 14 28) 0 0.7271 0.6665 11 12 ( 6347 1xna_A) ( 2241 1hn0_A) 0.5453 0.4999 5.2500 ( 0 9 15) 0 0.7264 0.6661 11 12 ( 6347 1xna_A) ( 2408 1i5p_A) 0.7268 0.6664 4.8661 ( 0 13 28) 0 0.7268 0.6664 11 12 ( 6347 1xna_A) ( 2762 1j83_A) 0.5454 0.5999 3.8596 ( 0 8 15) 0 0.7269 0.7993 11 10 ( 6347 1xna_A) ( 2872 1jhj_A) 0.8178 0.6427 4.0048 ( 0 20 36) 0 0.8178 0.6427 11 14 ( 6347 1xna_A) ( 2886 1ji6_A) 0.6363 0.6999 3.3793 ( 0 13 21) 0 0.6363 0.6999 11 10 ( 6347 1xna_A) ( 3063 1ju3_A) 0.4545 0.3846 4.3243 ( 0 5 10) 0 0.7263 0.6150 11 13 ( 6347 1xna_A) ( 3098 1jz7_A) 0.7270 0.4706 4.4031 ( 0 14 28) 0 0.7560 0.5211 11 17 ( 6347 1xna_A) ( 3124 1k12_A) 0.8178 0.6922 3.9666 ( 0 24 36) 0 0.8178 0.6922 11 13 ( 6347 1xna_A) ( 3157 1k3i_A) 0.7269 0.8879 4.6612 ( 0 12 28) 0 0.7269 0.8879 11 9 ( 6347 1xna_A) ( 3170 1k45_A) 0.7266 0.7266 5.3488 ( 0 10 28) 0 0.7266 0.7266 11 11 ( 6347 1xna_A) ( 3280 1kex_A) 0.7264 0.7986 5.8264 ( 0 14 28) 0 0.7264 0.7986 11 10 ( 6347 1xna_A) ( 3297 1kgy_A) 0.5453 0.5998 4.9250 ( 0 7 15) 0 0.7265 0.7987 11 10 ( 6347 1xna_A) ( 3562 1l7l_A) 0.4545 0.7138 5.0023 ( 0 0 10) 0 0.5186 0.7138 11 7 ( 6347 1xna_A) ( 3680 1lns_A) 0.7266 0.4210 5.3734 ( 0 16 28) 0 0.7266 0.4210 11 19 ( 6347 1xna_A) ( 4423 1nx9_A) 0.4543 0.3125 7.7197 ( 0 4 10) 0 0.6199 0.4777 11 16 ( 6347 1xna_A) ( 4496 1o59_A) 0.8180 0.8180 3.5435 ( 0 21 36) 0 0.8180 0.8180 11 11 ( 6347 1xna_A) ( 4497 1o59_A) 0.8178 0.9991 3.9661 ( 0 24 36) 0 0.8178 0.9991 11 9 ( 6347 1xna_A) ( 4599 1od3_A) 0.7272 0.7998 3.3135 ( 0 15 28) 0 0.7272 0.7998 11 10 ( 6347 1xna_A) ( 4654 1oh4_A) 0.7268 0.5332 4.9351 ( 0 16 28) 0 0.7268 0.5332 11 15 ( 6347 1xna_A) ( 4929 1p8j_A) 0.6363 0.8746 3.6740 ( 0 12 21) 0 0.6363 0.8746 11 8 ( 6347 1xna_A) ( 5569 1r64_A) 0.5439 0.5439 9.6522 ( 0 8 15) 0 0.7261 0.7261 11 11 ( 6347 1xna_A) ( 6050 1umh_A) 0.7271 0.6666 3.8111 ( 0 6 28) 0 0.7271 0.6666 11 12 ( 6347 1xna_A) ( 6140 1uxz_A) 0.7270 0.6153 4.1378 ( 0 15 28) 0 0.7270 0.6153 11 13 ( 6347 1xna_A) ( 6347 1xna_A) 1.0000 1.0000 0.0000 ( 0 43 55) 0 1.0000 1.0000 11 11 -------------------------------------------------------------------------------------------------------------------------