------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 5569 1r64_A) ( 387 1bhg_A) 0.3636 0.4443 6.4095 ( 0 5 6) 0 0.5452 0.6660 11 9 ( 5569 1r64_A) ( 607 1ciy ) 0.8176 0.8990 4.5634 ( 0 29 36) 0 0.8176 0.8990 11 10 ( 5569 1r64_A) ( 700 1cx1_A) 0.7244 0.7954 4.4052 ( 1 21 28) 0 0.7244 0.7954 11 10 ( 5569 1r64_A) ( 765 1d7p_M) 0.5454 0.4615 4.0967 ( 0 10 15) 0 0.5454 0.4888 11 13 ( 5569 1r64_A) ( 1271 1eut ) 0.6362 0.7773 4.6519 ( 0 13 21) 0 0.6362 0.7773 11 9 ( 5569 1r64_A) ( 1884 1gny_A) 0.8161 0.6914 4.9604 ( 1 29 36) 0 0.8161 0.6914 11 13 ( 5569 1r64_A) ( 1918 1gqp_A) 0.7270 0.5333 4.4931 ( 0 17 28) 0 0.7270 0.5333 11 15 ( 5569 1r64_A) ( 1954 1gu3_A) 0.7195 0.8684 4.0573 ( 1 16 28) 0 0.7195 0.8684 11 9 ( 5569 1r64_A) ( 1959 1gui_A) 0.7173 0.7173 4.1230 ( 1 15 28) 0 0.7236 0.7236 11 11 ( 5569 1r64_A) ( 1989 1gwm_A) 0.8143 0.8143 4.6961 ( 1 23 36) 0 0.8143 0.8143 11 11 ( 5569 1r64_A) ( 2116 1h6y_A) 0.8135 0.7470 5.6557 ( 1 23 36) 0 0.8135 0.7470 11 12 ( 5569 1r64_A) ( 2241 1hn0_A) 0.7219 0.6632 6.7394 ( 1 19 28) 0 0.7251 0.6652 11 12 ( 5569 1r64_A) ( 2408 1i5p_A) 0.8175 0.7495 4.7544 ( 0 25 36) 0 0.8175 0.7495 11 12 ( 5569 1r64_A) ( 2762 1j83_A) 0.7264 0.7986 5.7726 ( 0 20 28) 0 0.7264 0.7986 11 10 ( 5569 1r64_A) ( 2872 1jhj_A) 0.7271 0.5714 3.7180 ( 0 19 28) 0 0.7271 0.5714 11 14 ( 5569 1r64_A) ( 2886 1ji6_A) 0.8174 0.8988 4.7882 ( 0 28 36) 0 0.8174 0.8988 11 10 ( 5569 1r64_A) ( 3063 1ju3_A) 0.8927 0.7619 5.6529 ( 2 36 45) 0 0.8927 0.7619 11 13 ( 5569 1r64_A) ( 3098 1jz7_A) 0.7237 0.4702 5.0010 ( 1 20 28) 0 0.7237 0.4932 11 17 ( 5569 1r64_A) ( 3124 1k12_A) 0.7455 0.6573 4.2815 ( 3 30 36) 0 0.7455 0.6573 11 13 ( 5569 1r64_A) ( 3157 1k3i_A) 0.7260 0.8854 6.3840 ( 0 17 28) 0 0.7260 0.8854 11 9 ( 5569 1r64_A) ( 3170 1k45_A) 0.7266 0.7266 5.5008 ( 0 13 28) 0 0.7266 0.7266 11 11 ( 5569 1r64_A) ( 3280 1kex_A) 0.5454 0.5999 4.3168 ( 0 8 15) 0 0.5454 0.5999 11 10 ( 5569 1r64_A) ( 3297 1kgy_A) 0.8172 0.8984 5.1437 ( 0 26 36) 0 0.8172 0.8984 11 10 ( 5569 1r64_A) ( 3562 1l7l_A) 0.3636 0.5712 5.5128 ( 0 0 6) 0 0.6016 0.7924 11 7 ( 5569 1r64_A) ( 3680 1lns_A) 0.8936 0.5253 4.9002 ( 2 36 45) 0 0.8936 0.5253 11 19 ( 5569 1r64_A) ( 4423 1nx9_A) 0.7904 0.5579 6.6085 ( 2 27 36) 0 0.7904 0.5579 11 16 ( 5569 1r64_A) ( 4496 1o59_A) 0.7216 0.7216 5.8407 ( 1 18 28) 0 0.7216 0.7216 11 11 ( 5569 1r64_A) ( 4497 1o59_A) 0.6363 0.7775 4.0906 ( 0 15 21) 0 0.7259 0.8851 11 9 ( 5569 1r64_A) ( 4599 1od3_A) 0.7271 0.7997 3.9996 ( 0 21 28) 0 0.7271 0.7997 11 10 ( 5569 1r64_A) ( 4654 1oh4_A) 0.7268 0.5332 4.9210 ( 0 22 28) 0 0.8136 0.5990 11 15 ( 5569 1r64_A) ( 4929 1p8j_A) 0.7272 0.9996 3.1111 ( 0 21 28) 0 0.7272 0.9996 11 8 ( 5569 1r64_A) ( 5569 1r64_A) 1.0000 1.0000 0.0000 ( 0 48 55) 0 1.0000 1.0000 11 11 ( 5569 1r64_A) ( 6050 1umh_A) 0.7327 0.6905 5.0471 ( 2 19 36) 0 0.7327 0.6905 11 12 ( 5569 1r64_A) ( 6140 1uxz_A) 0.7884 0.6788 4.4950 ( 2 26 36) 0 0.7884 0.6788 11 13 ( 5569 1r64_A) ( 6347 1xna_A) 0.5439 0.5439 9.6522 ( 0 8 15) 0 0.7261 0.7261 11 11 -------------------------------------------------------------------------------------------------------------------------