------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 4599 1od3_A) ( 387 1bhg_A) 0.7992 0.8875 5.0970 ( 0 19 28) 0 0.7992 0.8875 10 9 ( 4599 1od3_A) ( 607 1ciy ) 0.8998 0.8998 3.2441 ( 0 30 36) 0 0.8998 0.8998 10 10 ( 4599 1od3_A) ( 700 1cx1_A) 0.8964 0.8964 3.7253 ( 1 26 36) 0 0.8964 0.8964 10 10 ( 4599 1od3_A) ( 765 1d7p_M) 0.4997 0.3845 7.1667 ( 0 6 10) 0 0.7427 0.5980 10 13 ( 4599 1od3_A) ( 1271 1eut ) 0.7996 0.8881 4.3552 ( 0 19 28) 0 0.7996 0.8881 10 9 ( 4599 1od3_A) ( 1884 1gny_A) 0.9712 0.7611 5.7962 ( 2 35 45) 0 0.9712 0.7611 10 13 ( 4599 1od3_A) ( 1918 1gqp_A) 0.6995 0.4666 5.1934 ( 0 10 21) 0 0.8988 0.5998 10 15 ( 4599 1od3_A) ( 1954 1gu3_A) 0.8922 0.9869 3.6086 ( 1 21 36) 0 0.8922 0.9869 10 9 ( 4599 1od3_A) ( 1959 1gui_A) 0.9949 0.9059 3.2332 ( 1 27 45) 0 0.9949 0.9059 10 11 ( 4599 1od3_A) ( 1989 1gwm_A) 0.8926 0.8136 4.8585 ( 1 22 36) 0 0.8926 0.8136 10 11 ( 4599 1od3_A) ( 2116 1h6y_A) 0.9676 0.8198 4.3974 ( 2 33 45) 0 0.9676 0.8198 10 12 ( 4599 1od3_A) ( 2241 1hn0_A) 0.8960 0.7484 4.8789 ( 1 27 36) 0 0.8960 0.7484 10 12 ( 4599 1od3_A) ( 2408 1i5p_A) 0.8999 0.7500 2.2057 ( 0 27 36) 0 0.8999 0.7500 10 12 ( 4599 1od3_A) ( 2762 1j83_A) 0.5236 0.5236 5.8472 ( 5 27 36) 0 0.6993 0.6993 10 10 ( 4599 1od3_A) ( 2872 1jhj_A) 0.7989 0.5712 5.4800 ( 0 16 28) 0 0.8989 0.6427 10 14 ( 4599 1od3_A) ( 2886 1ji6_A) 0.8998 0.8998 3.2111 ( 0 29 36) 0 0.8998 0.8998 10 10 ( 4599 1od3_A) ( 3063 1ju3_A) 0.4999 0.3846 5.4917 ( 0 6 10) 0 0.4999 0.3999 10 13 ( 4599 1od3_A) ( 3098 1jz7_A) 0.8985 0.5293 5.0645 ( 0 27 36) 0 0.8985 0.5293 10 17 ( 4599 1od3_A) ( 3124 1k12_A) 0.7994 0.6152 4.7449 ( 0 20 28) 0 0.7994 0.6152 10 13 ( 4599 1od3_A) ( 3157 1k3i_A) 0.7996 0.8881 4.3458 ( 0 17 28) 0 0.7996 0.8881 10 9 ( 4599 1od3_A) ( 3170 1k45_A) 0.9994 0.9087 3.5770 ( 0 27 45) 0 0.9994 0.9087 10 11 ( 4599 1od3_A) ( 3280 1kex_A) 0.7974 0.7974 6.7796 ( 0 18 28) 0 0.8397 0.8397 10 10 ( 4599 1od3_A) ( 3297 1kgy_A) 0.4999 0.4999 5.6341 ( 0 6 10) 0 0.7988 0.7988 10 10 ( 4599 1od3_A) ( 3562 1l7l_A) 0.4000 0.5712 5.7228 ( 0 2 6) 0 0.4998 0.7132 10 7 ( 4599 1od3_A) ( 3680 1lns_A) 0.4000 0.2105 5.0777 ( 0 5 6) 0 0.7974 0.4209 10 19 ( 4599 1od3_A) ( 4423 1nx9_A) 0.5000 0.3125 4.4232 ( 0 8 10) 0 0.5000 0.4429 10 16 ( 4599 1od3_A) ( 4496 1o59_A) 0.7993 0.7268 4.8781 ( 0 16 28) 0 0.8293 0.7716 10 11 ( 4599 1od3_A) ( 4497 1o59_A) 0.7996 0.8881 4.3360 ( 0 20 28) 0 0.7996 0.8881 10 9 ( 4599 1od3_A) ( 4599 1od3_A) 1.0000 1.0000 0.0000 ( 0 37 45) 0 1.0000 1.0000 10 10 ( 4599 1od3_A) ( 4654 1oh4_A) 0.9924 0.6657 6.3059 ( 1 35 45) 0 0.9924 0.6657 10 15 ( 4599 1od3_A) ( 4929 1p8j_A) 0.6999 0.8746 3.8491 ( 0 14 21) 0 0.6999 0.8746 10 8 ( 4599 1od3_A) ( 5569 1r64_A) 0.7997 0.7271 3.9996 ( 0 21 28) 0 0.7997 0.7271 10 11 ( 4599 1od3_A) ( 6050 1umh_A) 0.9988 0.8329 4.1835 ( 0 23 45) 0 0.9988 0.8329 10 12 ( 4599 1od3_A) ( 6140 1uxz_A) 0.9981 0.7687 3.4548 ( 1 37 45) 0 0.9981 0.7687 10 13 ( 4599 1od3_A) ( 6347 1xna_A) 0.7998 0.7272 3.3135 ( 0 15 28) 0 0.7998 0.7272 10 11 -------------------------------------------------------------------------------------------------------------------------