------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 387 1bhg_A) ( 387 1bhg_A) 1.0000 1.0000 0.0000 ( 0 29 36) 0 1.0000 1.0000 9 9 ( 387 1bhg_A) ( 607 1ciy ) 0.6664 0.5999 4.6929 ( 0 10 15) 0 0.7769 0.6995 9 10 ( 387 1bhg_A) ( 700 1cx1_A) 0.8875 0.7992 5.0288 ( 0 20 28) 0 0.8875 0.7992 9 10 ( 387 1bhg_A) ( 765 1d7p_M) 0.5546 0.3845 8.2256 ( 0 5 10) 0 0.8802 0.6140 9 13 ( 387 1bhg_A) ( 1271 1eut ) 0.8858 0.8858 6.1792 ( 0 21 28) 0 0.8858 0.8858 9 9 ( 387 1bhg_A) ( 1884 1gny_A) 0.5551 0.3845 6.7636 ( 0 6 10) 0 0.8833 0.6145 9 13 ( 387 1bhg_A) ( 1918 1gqp_A) 0.6662 0.4000 5.3745 ( 0 6 15) 0 0.6662 0.4000 9 15 ( 387 1bhg_A) ( 1954 1gu3_A) 0.8851 0.8851 6.5069 ( 0 14 28) 0 0.8869 0.8869 9 9 ( 387 1bhg_A) ( 1959 1gui_A) 0.8871 0.7266 5.4355 ( 0 14 28) 0 0.8871 0.7266 9 11 ( 387 1bhg_A) ( 1989 1gwm_A) 0.7695 0.6333 9.4131 ( 0 11 21) 0 0.7695 0.6333 9 11 ( 387 1bhg_A) ( 2116 1h6y_A) 0.6664 0.4999 4.9531 ( 0 4 15) 0 0.7771 0.5832 9 12 ( 387 1bhg_A) ( 2241 1hn0_A) 0.7723 0.5820 8.4680 ( 0 12 21) 0 0.7859 0.6368 9 12 ( 387 1bhg_A) ( 2408 1i5p_A) 0.6035 0.4823 6.8292 ( 1 8 15) 0 0.7761 0.5829 9 12 ( 387 1bhg_A) ( 2762 1j83_A) 0.7761 0.6990 6.2685 ( 0 14 21) 0 0.7761 0.6990 9 10 ( 387 1bhg_A) ( 2872 1jhj_A) 0.7768 0.4999 5.5037 ( 0 11 21) 0 0.7768 0.4999 9 14 ( 387 1bhg_A) ( 2886 1ji6_A) 0.5555 0.4999 4.5452 ( 0 7 10) 0 0.5555 0.4999 9 10 ( 387 1bhg_A) ( 3063 1ju3_A) 0.5551 0.3845 6.8777 ( 0 8 10) 0 0.8743 0.6130 9 13 ( 387 1bhg_A) ( 3098 1jz7_A) 0.8888 0.4706 2.4808 ( 0 20 28) 0 0.8888 0.4706 9 17 ( 387 1bhg_A) ( 3124 1k12_A) 0.6605 0.4605 10.6016 ( 0 11 15) 0 0.6605 0.4605 9 13 ( 387 1bhg_A) ( 3157 1k3i_A) 0.8859 0.8859 6.1651 ( 0 18 28) 0 0.8859 0.8859 9 9 ( 387 1bhg_A) ( 3170 1k45_A) 0.8853 0.7259 6.4340 ( 0 14 28) 0 0.8853 0.7259 9 11 ( 387 1bhg_A) ( 3280 1kex_A) 0.4442 0.3999 7.6506 ( 0 4 6) 0 0.7735 0.6974 9 10 ( 387 1bhg_A) ( 3297 1kgy_A) 0.7766 0.6993 5.7875 ( 0 12 21) 0 0.7766 0.6993 9 10 ( 387 1bhg_A) ( 3562 1l7l_A) 0.5553 0.7134 5.9068 ( 0 3 10) 0 0.7764 0.9952 9 7 ( 387 1bhg_A) ( 3680 1lns_A) 0.4881 0.3803 5.4834 ( 4 20 28) 0 0.5550 0.3803 9 19 ( 387 1bhg_A) ( 4423 1nx9_A) 0.5543 0.3124 8.8896 ( 0 7 10) 0 0.6656 0.3749 9 16 ( 387 1bhg_A) ( 4496 1o59_A) 0.8871 0.7266 5.3992 ( 0 16 28) 0 0.8871 0.7266 9 11 ( 387 1bhg_A) ( 4497 1o59_A) 0.8872 0.8872 5.3440 ( 0 20 28) 0 0.8872 0.8872 9 9 ( 387 1bhg_A) ( 4599 1od3_A) 0.8875 0.7992 5.0970 ( 0 19 28) 0 0.8875 0.7992 9 10 ( 387 1bhg_A) ( 4654 1oh4_A) 0.5550 0.3333 7.0841 ( 0 8 10) 0 0.8800 0.5326 9 15 ( 387 1bhg_A) ( 4929 1p8j_A) 0.6665 0.7498 4.0093 ( 0 8 15) 0 0.6665 0.7498 9 8 ( 387 1bhg_A) ( 5569 1r64_A) 0.6211 0.5271 9.6602 ( 1 9 15) 0 0.6660 0.5452 9 11 ( 387 1bhg_A) ( 6050 1umh_A) 0.8857 0.6659 6.2638 ( 0 6 28) 0 0.8857 0.6659 9 12 ( 387 1bhg_A) ( 6140 1uxz_A) 0.8869 0.6151 5.5143 ( 0 19 28) 0 0.8869 0.6151 9 13 ( 387 1bhg_A) ( 6347 1xna_A) 0.8870 0.7266 5.4964 ( 0 14 28) 0 0.8870 0.7266 9 11 -------------------------------------------------------------------------------------------------------------------------